BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst022n06
         (959 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAU82106.1| 20S proteasome beta 4 subunit [Triticum aestivum]      373   e-101
ref|NP_001105922.1| putative beta 4 proteasome subunit [Zea mays...   370   e-101
ref|NP_001050976.1| Os03g0695600 [Oryza sativa (japonica cultiva...   366   1e-99
dbj|BAA96837.1| beta 4 subunit of 20S proteasome [Oryza sativa (...   363   7e-99
ref|NP_188902.1| PBD1 (PROTEASOME SUBUNIT PRGB); peptidase [Arab...   322   3e-86

>gb|AAU82106.1| 20S proteasome beta 4 subunit [Triticum aestivum]
          Length = 213

 Score =  373 bits (957), Expect = e-101
 Identities = 187/208 (89%), Positives = 197/208 (94%)
 Frame = +3

Query: 81  MECVLGVVGREFAVVAADTSAVQSILVHKTDEDKVMLLDSHKLMGASGEPGDRVQFTEFI 260
           MECV+GVVG +FAVVAADTSAVQSILVHKTDEDK+MLLDSHKLMGASGEPGDRVQFTEFI
Sbjct: 1   MECVIGVVGSDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFI 60

Query: 261 QKNLHLYQFRNSIPLTTAATANFTRGELATALRKNPYSVNIILAGYDKDAGASMYYIDYI 440
           QKNLHLYQFRN++PL+TAATANFTRGELATALRKNPYSVNIILAG+DKDAGASMYYIDYI
Sbjct: 61  QKNLHLYQFRNNMPLSTAATANFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYI 120

Query: 441 ATLHKIDKGAFGYGSYFCLSLMDKLYRPDITVEEAVDLVDKCIKEIRLRLVVAPPNFVIK 620
           ATLHKIDKGAFGYGSYFCLSLMDKLYRPD+TVEEAVDLVDKCIKEIRLRLVVAP NF IK
Sbjct: 121 ATLHKIDKGAFGYGSYFCLSLMDKLYRPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAIK 180

Query: 621 IVDKDGAREYARRESISGNPSEAATTTA 704
           IVDKDGAR+YARRE I G+     T TA
Sbjct: 181 IVDKDGARDYARRE-IGGDSPAVTTATA 207


>ref|NP_001105922.1| putative beta 4 proteasome subunit [Zea mays]
 gb|AAU93515.1| putative beta 4 proteasome subunit [Zea mays]
          Length = 210

 Score =  370 bits (949), Expect = e-101
 Identities = 186/209 (88%), Positives = 196/209 (93%), Gaps = 1/209 (0%)
 Frame = +3

Query: 81  MECVLGVVGREFAVVAADTSAVQSILVHKTDEDKVMLLDSHKLMGASGEPGDRVQFTEFI 260
           MECVLGVVGR+FA+VAADTSAVQSILVHKTDEDKVM+LDS KLMGASGEPGDRVQFTEFI
Sbjct: 1   MECVLGVVGRDFALVAADTSAVQSILVHKTDEDKVMVLDSQKLMGASGEPGDRVQFTEFI 60

Query: 261 QKNLHLYQFRNSIPLTTAATANFTRGELATALRKNPYSVNIILAGYDKDAGASMYYIDYI 440
           QKNLHLYQFRN+IPL+TAA ANFTRGELATALRKNPY VNIIL GYDKD GAS+YYIDYI
Sbjct: 61  QKNLHLYQFRNTIPLSTAAAANFTRGELATALRKNPYMVNIILGGYDKDVGASLYYIDYI 120

Query: 441 ATLHKIDKGAFGYGSYFCLSLMDKLYRPDITVEEAVDLVDKCIKEIRLRLVVAPPNFVIK 620
           ATLHKIDKGAFGYGSYFCLSLMDKLY PD+TVEEAVDLVDKCIKEIRLRLVVAP NFVIK
Sbjct: 121 ATLHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFVIK 180

Query: 621 IVDKDGAREYARRESISGN-PSEAATTTA 704
           IVDKDGAREYARRE +  + P+EAA T A
Sbjct: 181 IVDKDGAREYARRELVGDSAPAEAAATVA 209


>ref|NP_001050976.1| Os03g0695600 [Oryza sativa (japonica cultivar-group)]
 sp|Q9LST6|PSB2_ORYSJ Proteasome subunit beta type-2 (20S proteasome alpha subunit D)
           (20S proteasome subunit beta-4)
 gb|AAO19369.1| 20S proteasome beta 4 subunit [Oryza sativa (japonica
           cultivar-group)]
 gb|ABF98343.1| Proteasome subunit beta type 2, putative, expressed [Oryza sativa
           (japonica cultivar-group)]
 dbj|BAF12890.1| Os03g0695600 [Oryza sativa (japonica cultivar-group)]
 gb|EAY91498.1| hypothetical protein OsI_012731 [Oryza sativa (indica
           cultivar-group)]
 gb|EAZ28234.1| hypothetical protein OsJ_011717 [Oryza sativa (japonica
           cultivar-group)]
 gb|ABR25433.1| 20S proteasome beta subunit d2 [Oryza sativa (indica
           cultivar-group)]
          Length = 212

 Score =  366 bits (939), Expect = 1e-99
 Identities = 181/208 (87%), Positives = 198/208 (95%)
 Frame = +3

Query: 81  MECVLGVVGREFAVVAADTSAVQSILVHKTDEDKVMLLDSHKLMGASGEPGDRVQFTEFI 260
           MECV+GVVGR+FAVVAADTSAVQSILVHKTDEDKVM+LDSHKLMGASGEPGDRVQFTEFI
Sbjct: 1   MECVIGVVGRDFAVVAADTSAVQSILVHKTDEDKVMVLDSHKLMGASGEPGDRVQFTEFI 60

Query: 261 QKNLHLYQFRNSIPLTTAATANFTRGELATALRKNPYSVNIILAGYDKDAGASMYYIDYI 440
           QKNLHLYQFRN+IPL+TAATANFTRGELATALRKNPY VN++LAGYD D GAS+YYIDYI
Sbjct: 61  QKNLHLYQFRNNIPLSTAATANFTRGELATALRKNPYYVNVLLAGYDSDVGASLYYIDYI 120

Query: 441 ATLHKIDKGAFGYGSYFCLSLMDKLYRPDITVEEAVDLVDKCIKEIRLRLVVAPPNFVIK 620
           AT HKI+KGAFGYGSYFCLSLMDKLYRPD++VEEAVDLVDKCIKEIRLRLVVAP NF+IK
Sbjct: 121 ATFHKIEKGAFGYGSYFCLSLMDKLYRPDMSVEEAVDLVDKCIKEIRLRLVVAPQNFIIK 180

Query: 621 IVDKDGAREYARRESISGNPSEAATTTA 704
           IVDK+GAREYARR + + +P EAAT+ A
Sbjct: 181 IVDKEGAREYARR-AYTDSPPEAATSEA 207


>dbj|BAA96837.1| beta 4 subunit of 20S proteasome [Oryza sativa (japonica
           cultivar-group)]
          Length = 212

 Score =  363 bits (933), Expect = 7e-99
 Identities = 180/208 (86%), Positives = 197/208 (94%)
 Frame = +3

Query: 81  MECVLGVVGREFAVVAADTSAVQSILVHKTDEDKVMLLDSHKLMGASGEPGDRVQFTEFI 260
           MECV+GVVGR+ AVVAADTSAVQSILVHKTDEDKVM+LDSHKLMGASGEPGDRVQFTEFI
Sbjct: 1   MECVIGVVGRDIAVVAADTSAVQSILVHKTDEDKVMVLDSHKLMGASGEPGDRVQFTEFI 60

Query: 261 QKNLHLYQFRNSIPLTTAATANFTRGELATALRKNPYSVNIILAGYDKDAGASMYYIDYI 440
           QKNLHLYQFRN+IPL+TAATANFTRGELATALRKNPY VN++LAGYD D GAS+YYIDYI
Sbjct: 61  QKNLHLYQFRNNIPLSTAATANFTRGELATALRKNPYYVNVLLAGYDSDVGASLYYIDYI 120

Query: 441 ATLHKIDKGAFGYGSYFCLSLMDKLYRPDITVEEAVDLVDKCIKEIRLRLVVAPPNFVIK 620
           AT HKI+KGAFGYGSYFCLSLMDKLYRPD++VEEAVDLVDKCIKEIRLRLVVAP NF+IK
Sbjct: 121 ATFHKIEKGAFGYGSYFCLSLMDKLYRPDMSVEEAVDLVDKCIKEIRLRLVVAPQNFIIK 180

Query: 621 IVDKDGAREYARRESISGNPSEAATTTA 704
           IVDK+GAREYARR + + +P EAAT+ A
Sbjct: 181 IVDKEGAREYARR-AYTDSPPEAATSEA 207


>ref|NP_188902.1| PBD1 (PROTEASOME SUBUNIT PRGB); peptidase [Arabidopsis thaliana]
 sp|O23714|PSB2A_ARATH Proteasome subunit beta type-2-A (Proteasome subunit beta type-4)
           (20S proteasome beta subunit D-1) (Proteasome component
           GB)
 emb|CAA74026.1| multicatalytic endopeptidase complex, proteasome component, beta
           subunit [Arabidopsis thaliana]
 gb|AAC32070.1| 20S proteasome beta subunit PBD1 [Arabidopsis thaliana]
 dbj|BAB01477.1| multicatalytic endopeptidase complex, proteasome component, beta
           subunit [Arabidopsis thaliana]
 gb|AAK97719.1| AT3g22630/F16J14_20 [Arabidopsis thaliana]
 gb|AAN28756.1| At3g22630/F16J14_20 [Arabidopsis thaliana]
          Length = 204

 Score =  322 bits (824), Expect = 3e-86
 Identities = 154/196 (78%), Positives = 179/196 (91%)
 Frame = +3

Query: 81  MECVLGVVGREFAVVAADTSAVQSILVHKTDEDKVMLLDSHKLMGASGEPGDRVQFTEFI 260
           MECV G+VG  FA+VAADTSAV SIL+HK +EDK+M+LDSHKL+ ASGEPGDRVQFTE++
Sbjct: 1   MECVFGLVGNGFAIVAADTSAVHSILLHKNNEDKIMVLDSHKLVAASGEPGDRVQFTEYV 60

Query: 261 QKNLHLYQFRNSIPLTTAATANFTRGELATALRKNPYSVNIILAGYDKDAGASMYYIDYI 440
           QKN+ LY+FRN IPLTTAA ANFTRGELATALRKNPYSVNI++AGYD ++GAS+YYIDYI
Sbjct: 61  QKNVSLYKFRNGIPLTTAAAANFTRGELATALRKNPYSVNILMAGYDDESGASLYYIDYI 120

Query: 441 ATLHKIDKGAFGYGSYFCLSLMDKLYRPDITVEEAVDLVDKCIKEIRLRLVVAPPNFVIK 620
           ATLHK+DKGAFGYGSYF LS MD+ YR D++VEEA++LVDKCI EIR RLVVAPPNFVIK
Sbjct: 121 ATLHKVDKGAFGYGSYFSLSTMDRHYRSDMSVEEAIELVDKCILEIRSRLVVAPPNFVIK 180

Query: 621 IVDKDGAREYARRESI 668
           IVDKDGAR+YA R+S+
Sbjct: 181 IVDKDGARDYAWRQSV 196