BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst022b02
         (1242 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001053847.1| Os04g0612600 [Oryza sativa (japonica cultiva...   505   e-141
ref|NP_001104962.1| coatomer protein2 [Zea mays] >gi|7677264|gb|...   503   e-141
gb|EAY95516.1| hypothetical protein OsI_016749 [Oryza sativa (in...   452   e-125
gb|AAM65018.1| coatomer-like protein, epsilon subunit [Arabidops...   440   e-121
ref|NP_174351.1| coatomer protein epsilon subunit family protein...   440   e-121

>ref|NP_001053847.1| Os04g0612600 [Oryza sativa (japonica cultivar-group)]
 sp|Q9MAX6|COPE1_ORYSJ Coatomer subunit epsilon-1 (Epsilon-coat protein 1) (Epsilon-COP 1)
           (Epsilon1-COP)
 dbj|BAA94966.1| epsilon1-COP [Oryza sativa (japonica cultivar-group)]
 emb|CAE05205.3| OSJNBa0070C17.12 [Oryza sativa (japonica cultivar-group)]
 dbj|BAF15761.1| Os04g0612600 [Oryza sativa (japonica cultivar-group)]
 gb|EAZ31957.1| hypothetical protein OsJ_015440 [Oryza sativa (japonica
           cultivar-group)]
          Length = 287

 Score =  505 bits (1300), Expect = e-141
 Identities = 256/283 (90%), Positives = 263/283 (92%)
 Frame = +2

Query: 113 DLLFNLRNLFYLGAYQAAINNSDVPGLDADAAVERDAIVFRSYIALGSYQLVISEIDSSA 292
           DLLFNLRNLFYLGAYQAAINNSDVPGLDADAA ERDAIVFRSY+ALGSYQLVISEIDSSA
Sbjct: 5   DLLFNLRNLFYLGAYQAAINNSDVPGLDADAAAERDAIVFRSYVALGSYQLVISEIDSSA 64

Query: 293 ATSLQAVKLLALYLSGDKEGAISSLKEWLSDSAIGSNPVLRLIAGIIFMHEQDYNEALKH 472
           ATSLQAVKLLALYLSGDKE AI SLKEWLSDSA+GSNPVLRLIAGIIFMHEQDY EALKH
Sbjct: 65  ATSLQAVKLLALYLSGDKESAIVSLKEWLSDSAVGSNPVLRLIAGIIFMHEQDYTEALKH 124

Query: 473 THSGGTLELHALNVQIFIKMHRSDYAEKQLKIMQQTDEDHTLTQLANAWMNIAVGGSKIH 652
           THSGGTL+LHALNVQIFIKMHRSDYAEKQLKIMQQ DEDHTLTQLANAW++IAVGGSKI 
Sbjct: 125 THSGGTLDLHALNVQIFIKMHRSDYAEKQLKIMQQIDEDHTLTQLANAWLDIAVGGSKIR 184

Query: 653 EAYLIFQDFAEKYPMTGMVLNGKAVCCMHMGSFXXXXXXXXXXXNKDAKDPETLANLIVC 832
           EAYLIFQDFAEKYPMTGMVLNGKAVCCMHMGSF           NKDAKDPETLANLIVC
Sbjct: 185 EAYLIFQDFAEKYPMTGMVLNGKAVCCMHMGSFDEAETLLLEALNKDAKDPETLANLIVC 244

Query: 833 NLHLGKSSSRFLSQLKLSHPDHVLVKRAATAEDNFERALQPVA 961
           NLHLGK SSR+LSQLKLSHPDHVLVKRA +AEDNFERALQ VA
Sbjct: 245 NLHLGKPSSRYLSQLKLSHPDHVLVKRAVSAEDNFERALQAVA 287


>ref|NP_001104962.1| coatomer protein2 [Zea mays]
 gb|AAF67099.1|AF216853_1 epsilon-COP [Zea mays]
          Length = 287

 Score =  503 bits (1296), Expect = e-141
 Identities = 256/283 (90%), Positives = 262/283 (92%)
 Frame = +2

Query: 113 DLLFNLRNLFYLGAYQAAINNSDVPGLDADAAVERDAIVFRSYIALGSYQLVISEIDSSA 292
           DLLFNLRNLFYLGAYQAAINNSDVPGLDADAA ERDAIVFRSYIALGSYQLVISEIDSSA
Sbjct: 5   DLLFNLRNLFYLGAYQAAINNSDVPGLDADAAAERDAIVFRSYIALGSYQLVISEIDSSA 64

Query: 293 ATSLQAVKLLALYLSGDKEGAISSLKEWLSDSAIGSNPVLRLIAGIIFMHEQDYNEALKH 472
           ATSLQAVKLLALYL+GDKEGAISSLKEWLSDSAIGSNPVLRLIAGI+FMHEQDYNEALKH
Sbjct: 65  ATSLQAVKLLALYLTGDKEGAISSLKEWLSDSAIGSNPVLRLIAGIVFMHEQDYNEALKH 124

Query: 473 THSGGTLELHALNVQIFIKMHRSDYAEKQLKIMQQTDEDHTLTQLANAWMNIAVGGSKIH 652
           THSGGTL+LHALNVQIFIKMHRSDYAEKQLKIMQQ DEDHTLTQLANAW+ IAVGGSKI 
Sbjct: 125 THSGGTLDLHALNVQIFIKMHRSDYAEKQLKIMQQIDEDHTLTQLANAWLGIAVGGSKIR 184

Query: 653 EAYLIFQDFAEKYPMTGMVLNGKAVCCMHMGSFXXXXXXXXXXXNKDAKDPETLANLIVC 832
           EAYLIFQDFAEKYPMTGMVLNGKAVCCMHMGSF           NKDAKDPETLANLIVC
Sbjct: 185 EAYLIFQDFAEKYPMTGMVLNGKAVCCMHMGSFEEAETLLLEALNKDAKDPETLANLIVC 244

Query: 833 NLHLGKSSSRFLSQLKLSHPDHVLVKRAATAEDNFERALQPVA 961
           NLHLGK SSR+LSQLKLSHPDHVLVK AA +E  FERALQ VA
Sbjct: 245 NLHLGKPSSRYLSQLKLSHPDHVLVKNAAASEATFERALQAVA 287


>gb|EAY95516.1| hypothetical protein OsI_016749 [Oryza sativa (indica
           cultivar-group)]
          Length = 288

 Score =  452 bits (1162), Expect = e-125
 Identities = 235/284 (82%), Positives = 245/284 (86%), Gaps = 2/284 (0%)
 Frame = +2

Query: 113 DLLFNLRNLFYLGAYQAAINNSDVPGLDADAAVERDAIVFRSYIALGSYQLVISEIDSSA 292
           DLLFNLRNLFYLGAYQAAINNSDVPGLDADAA ERDAIVFRSY+ALGSYQLVISEIDSSA
Sbjct: 5   DLLFNLRNLFYLGAYQAAINNSDVPGLDADAAAERDAIVFRSYVALGSYQLVISEIDSSA 64

Query: 293 ATSLQAVKLLALYLSGDKEGAISSLKEWLSDSAIGSNPVLRLIAGIIFMHEQDYNEALKH 472
           ATSLQAVKLLALYLSGDKE AI SLKEWLSDSA+GSNPVLRLIAGIIFMHEQDY EALKH
Sbjct: 65  ATSLQAVKLLALYLSGDKESAIVSLKEWLSDSAVGSNPVLRLIAGIIFMHEQDYTEALKH 124

Query: 473 THSGGTLELHALNVQIFIKMHRSDYAEKQLKIMQQTDEDHTLTQLANAWMNIAVGGSKIH 652
           THSGGTL+LHALNVQIFIKMHRSDYAEKQLKIMQQ DEDHTLTQLANAW++IAVGGSKI 
Sbjct: 125 THSGGTLDLHALNVQIFIKMHRSDYAEKQLKIMQQIDEDHTLTQLANAWLDIAVGGSKIR 184

Query: 653 EAYLIFQDFAEKYPMTGMVLNGKAVCCMHMGSFXXXXXXXXXXXNKDAKDPETLANLIVC 832
           EAYLIFQDFAEKYPMTGMVLNGKAVCCMHMGSF           NKDAKDPETLANLIVC
Sbjct: 185 EAYLIFQDFAEKYPMTGMVLNGKAVCCMHMGSFDEAETLLLEALNKDAKDPETLANLIVC 244

Query: 833 NLHLGKSSSRFLSQLKLSHPDHVLVKRAATAED--NFERALQPV 958
           NLHLGK SSR+L   +          +AAT E   N    +QP+
Sbjct: 245 NLHLGKPSSRYLRNYQTDVNISWHGAKAATQEKYLNLCLTIQPI 288


>gb|AAM65018.1| coatomer-like protein, epsilon subunit [Arabidopsis thaliana]
          Length = 289

 Score =  440 bits (1131), Expect = e-121
 Identities = 215/285 (75%), Positives = 249/285 (87%), Gaps = 2/285 (0%)
 Frame = +2

Query: 113 DLLFNLRNLFYLGAYQAAINNSDVPGLDADAAVERDAIVFRSYIALGSYQLVISEIDSSA 292
           D LFNLRN FYLGAYQAAINNS++P L  +  VERD +V R+YIALGSYQLVISEID +A
Sbjct: 5   DHLFNLRNHFYLGAYQAAINNSEIPNLSQEDIVERDCLVHRAYIALGSYQLVISEIDEAA 64

Query: 293 ATSLQAVKLLALYLSG--DKEGAISSLKEWLSDSAIGSNPVLRLIAGIIFMHEQDYNEAL 466
           AT LQAVKLLA+YLS   +KE  ISSL+EWL+D  +G+N ++RLIAG IFMHE+DYNEAL
Sbjct: 65  ATPLQAVKLLAMYLSSPENKESTISSLREWLADPTVGNNAIIRLIAGTIFMHEEDYNEAL 124

Query: 467 KHTHSGGTLELHALNVQIFIKMHRSDYAEKQLKIMQQTDEDHTLTQLANAWMNIAVGGSK 646
           KHTHSGGT++LHALNVQIFIKMHRSD+AEKQL++MQQ DEDHTLTQLA+AW+N+AVGGSK
Sbjct: 125 KHTHSGGTMDLHALNVQIFIKMHRSDFAEKQLRVMQQIDEDHTLTQLASAWLNLAVGGSK 184

Query: 647 IHEAYLIFQDFAEKYPMTGMVLNGKAVCCMHMGSFXXXXXXXXXXXNKDAKDPETLANLI 826
           I EAYLIFQDF+EKYPMT ++LNGKAVCCMHMG+F           NKDAKDPETLANL+
Sbjct: 185 IQEAYLIFQDFSEKYPMTSLILNGKAVCCMHMGNFEEAETLLLEALNKDAKDPETLANLV 244

Query: 827 VCNLHLGKSSSRFLSQLKLSHPDHVLVKRAATAEDNFERALQPVA 961
           VC+LH+GKSSSR+L+QLKLSHP+HVLVKRAA+AEDNFERALQ  A
Sbjct: 245 VCSLHVGKSSSRYLNQLKLSHPEHVLVKRAASAEDNFERALQSFA 289


>ref|NP_174351.1| coatomer protein epsilon subunit family protein / COPE family
           protein [Arabidopsis thaliana]
 sp|Q9SA78|COPE1_ARATH Coatomer subunit epsilon-1 (Epsilon-coat protein 1) (Epsilon-COP 1)
 gb|AAD25750.1|AC007060_8 Strong similarity to F19I3.7 gi|3033380 putative coatomer epsilon
           subunit from Arabidopsis thaliana BAC gb|AC004238.  ESTs
           gb|Z17908, gb|AA728673, gb|N96555, gb|H76335,
           gb|AA712463, gb|W43247, gb|T45611, gb|T21160, gb|T14119
           and AI100483 come from this gene
 gb|AAK15559.1|AF348588_1 putative coatomer protein, epsilon subunit [Arabidopsis thaliana]
 gb|AAK44140.1|AF370325_1 putative coatomer protein, epsilon subunit [Arabidopsis thaliana]
 gb|AAL34287.1| putative coatomer protein, epsilon subunit [Arabidopsis thaliana]
          Length = 292

 Score =  440 bits (1131), Expect = e-121
 Identities = 215/285 (75%), Positives = 249/285 (87%), Gaps = 2/285 (0%)
 Frame = +2

Query: 113 DLLFNLRNLFYLGAYQAAINNSDVPGLDADAAVERDAIVFRSYIALGSYQLVISEIDSSA 292
           D LFNLRN FYLGAYQAAINNS++P L  +  VERD +V R+YIALGSYQLVISEID +A
Sbjct: 8   DHLFNLRNHFYLGAYQAAINNSEIPNLSQEDIVERDCLVHRAYIALGSYQLVISEIDEAA 67

Query: 293 ATSLQAVKLLALYLSG--DKEGAISSLKEWLSDSAIGSNPVLRLIAGIIFMHEQDYNEAL 466
           AT LQAVKLLA+YLS   +KE  ISSL+EWL+D  +G+N ++RLIAG IFMHE+DYNEAL
Sbjct: 68  ATPLQAVKLLAMYLSSPENKESTISSLREWLADPTVGNNAIIRLIAGTIFMHEEDYNEAL 127

Query: 467 KHTHSGGTLELHALNVQIFIKMHRSDYAEKQLKIMQQTDEDHTLTQLANAWMNIAVGGSK 646
           KHTHSGGT++LHALNVQIFIKMHRSD+AEKQL++MQQ DEDHTLTQLA+AW+N+AVGGSK
Sbjct: 128 KHTHSGGTMDLHALNVQIFIKMHRSDFAEKQLRVMQQIDEDHTLTQLASAWLNLAVGGSK 187

Query: 647 IHEAYLIFQDFAEKYPMTGMVLNGKAVCCMHMGSFXXXXXXXXXXXNKDAKDPETLANLI 826
           I EAYLIFQDF+EKYPMT ++LNGKAVCCMHMG+F           NKDAKDPETLANL+
Sbjct: 188 IQEAYLIFQDFSEKYPMTSLILNGKAVCCMHMGNFEEAETLLLEALNKDAKDPETLANLV 247

Query: 827 VCNLHLGKSSSRFLSQLKLSHPDHVLVKRAATAEDNFERALQPVA 961
           VC+LH+GKSSSR+L+QLKLSHP+HVLVKRAA+AEDNFERALQ  A
Sbjct: 248 VCSLHVGKSSSRYLNQLKLSHPEHVLVKRAASAEDNFERALQSFA 292