BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst021n08
         (1038 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61706.1| hypothetical protein [Vitis vinifera] >gi|157358...   160   2e-37
ref|NP_193777.1| SMB [Arabidopsis thaliana] >gi|30685110|ref|NP_...   154   1e-35
gb|ABK93409.1| unknown [Populus trichocarpa]                          150   1e-34
dbj|BAD43836.1| unknown protein [Arabidopsis thaliana]                142   3e-32
gb|AAM61039.1| putative snRNP protein [Arabidopsis thaliana]          142   4e-32

>emb|CAN61706.1| hypothetical protein [Vitis vinifera]
 emb|CAO66018.1| unnamed protein product [Vitis vinifera]
          Length = 276

 Score =  160 bits (404), Expect = 2e-37
 Identities = 90/164 (54%), Positives = 97/164 (59%)
 Frame = +1

Query: 133 MSNPKGSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPSKSSKXX 312
           MS  K SKMLQ+INYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPP+K  K  
Sbjct: 1   MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKK-N 59

Query: 313 XXXXXXXXXXXXXXXXXXVVSMTVEGPPPPDESXXXXXXXXXXXXXXXXXXXXXXXXXXX 492
                             V+SMTVEGPPPP+ES                           
Sbjct: 60  EEREERRTLGLVLLRGEEVISMTVEGPPPPEES-RAKAVGAAAMAGPGIGRAAGRGIPTA 118

Query: 493 XLLQAQPGLSXXXXXXXXXXXXMMQPQISRPPVPNLSAPPVAYP 624
            L+QAQPGL+            MMQPQISRPPVP LSAPP+ YP
Sbjct: 119 PLIQAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYP 162


>ref|NP_193777.1| SMB [Arabidopsis thaliana]
 ref|NP_849414.1| SMB [Arabidopsis thaliana]
 ref|NP_001031682.1| SMB [Arabidopsis thaliana]
 emb|CAB45810.1| putative snRNP protein [Arabidopsis thaliana]
 emb|CAB79044.1| putative snRNP protein [Arabidopsis thaliana]
 gb|AAO42236.1| putative snRNP protein [Arabidopsis thaliana]
 gb|AAO50590.1| putative snRNP protein [Arabidopsis thaliana]
          Length = 257

 Score =  154 bits (388), Expect = 1e-35
 Identities = 89/164 (54%), Positives = 94/164 (57%)
 Frame = +1

Query: 133 MSNPKGSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPSKSSKXX 312
           MS  K SKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPP+K  K  
Sbjct: 1   MSMSKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKIN 60

Query: 313 XXXXXXXXXXXXXXXXXXVVSMTVEGPPPPDESXXXXXXXXXXXXXXXXXXXXXXXXXXX 492
                             V+SMTVEGPPPP+ES                           
Sbjct: 61  EEREDRRTLGLVLLRGEEVISMTVEGPPPPEESRAKAGSAAAVAGPGIGRAAGRGVPTGP 120

Query: 493 XLLQAQPGLSXXXXXXXXXXXXMMQPQISRPPVPNLSAPPVAYP 624
            L+QAQPGLS            MMQPQISRP  P LSAPP+  P
Sbjct: 121 -LVQAQPGLSGPVRGVGGPAPGMMQPQISRP--PQLSAPPIIRP 161


>gb|ABK93409.1| unknown [Populus trichocarpa]
          Length = 286

 Score =  150 bits (380), Expect = 1e-34
 Identities = 86/164 (52%), Positives = 94/164 (57%)
 Frame = +1

Query: 133 MSNPKGSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPSKSSKXX 312
           MS  K SKMLQ+INYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPP+K  K  
Sbjct: 1   MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKNN 60

Query: 313 XXXXXXXXXXXXXXXXXXVVSMTVEGPPPPDESXXXXXXXXXXXXXXXXXXXXXXXXXXX 492
                             V+SMTVEGPPPP+ES                           
Sbjct: 61  EEREDRRTLGLVLLRGEEVISMTVEGPPPPEESRAKAVSAAAVAGPGLGRAAGRGIPTAP 120

Query: 493 XLLQAQPGLSXXXXXXXXXXXXMMQPQISRPPVPNLSAPPVAYP 624
            L+QAQPGL+            MMQPQ+SR   P LSAPP+ YP
Sbjct: 121 -LVQAQPGLAGPVRGVGGPSPGMMQPQLSR---PQLSAPPMTYP 160


>dbj|BAD43836.1| unknown protein [Arabidopsis thaliana]
          Length = 254

 Score =  142 bits (359), Expect = 3e-32
 Identities = 85/165 (51%), Positives = 93/165 (56%), Gaps = 1/165 (0%)
 Frame = +1

Query: 133 MSNPKGSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPSKSSKXX 312
           MS  K SKMLQFINYRMRVTIQDGRQL+GKFMAFDRHMNLVLGDCEEFRKLPP+K +K  
Sbjct: 1   MSMSKSSKMLQFINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPAKGNKKT 60

Query: 313 XXXXXXXXXXXXXXXXXX-VVSMTVEGPPPPDESXXXXXXXXXXXXXXXXXXXXXXXXXX 489
                              V+SMTVEGPPPP+ES                          
Sbjct: 61  NEEREERRTLGLVLLRGEEVISMTVEGPPPPEESRAKSGSVTAVAGPGIGRAAGRGVPTG 120

Query: 490 XXLLQAQPGLSXXXXXXXXXXXXMMQPQISRPPVPNLSAPPVAYP 624
             L+QAQPGLS            MMQPQISRPP+  +  PP   P
Sbjct: 121 P-LVQAQPGLSGPVRGIGGPAPGMMQPQISRPPL--IIRPPGQMP 162


>gb|AAM61039.1| putative snRNP protein [Arabidopsis thaliana]
          Length = 254

 Score =  142 bits (358), Expect = 4e-32
 Identities = 85/165 (51%), Positives = 92/165 (55%), Gaps = 1/165 (0%)
 Frame = +1

Query: 133 MSNPKGSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPSKSSKXX 312
           MS  K SKMLQFINYRMRVTIQDGRQL+GKFMAFDRHMNLVLGDCEEFRKLPP+K +K  
Sbjct: 1   MSMSKSSKMLQFINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPAKGNKKT 60

Query: 313 XXXXXXXXXXXXXXXXXX-VVSMTVEGPPPPDESXXXXXXXXXXXXXXXXXXXXXXXXXX 489
                              V+SMTVEGPPPP+ES                          
Sbjct: 61  SEEREERRTLGLVLLRGEEVISMTVEGPPPPEESRAKSGSVTAVAGPGIGRAAGRGVPTG 120

Query: 490 XXLLQAQPGLSXXXXXXXXXXXXMMQPQISRPPVPNLSAPPVAYP 624
             L+QAQPGLS            MMQPQISRP  P +  PP   P
Sbjct: 121 P-LVQAQPGLSGPVRGIGGPAPGMMQPQISRP--PQIIRPPGQMP 162