BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst021m16
         (884 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAZ26952.1| hypothetical protein OsJ_010435 [Oryza sativa (ja...   400   e-110
ref|NP_001050139.1| Os03g0356300 [Oryza sativa (japonica cultiva...   400   e-110
ref|NP_001051292.1| Os03g0751400 [Oryza sativa (japonica cultiva...   394   e-108
ref|NP_172011.1| EMB2394 (EMBRYO DEFECTIVE 2394); structural con...   305   3e-81
gb|ABK21300.1| unknown [Picea sitchensis] >gi|116792071|gb|ABK26...   283   8e-75

>gb|EAZ26952.1| hypothetical protein OsJ_010435 [Oryza sativa (japonica
           cultivar-group)]
          Length = 226

 Score =  400 bits (1028), Expect = e-110
 Identities = 198/211 (93%), Positives = 206/211 (97%)
 Frame = +2

Query: 80  HLPCNSRTGFLGKTQGIRLRVIPAGRVGFVRKVVECKESRIGKKPIEVPSNVTLTLEEQF 259
           HLPCNSRTGF GKTQGIRLRVIPAGRVGFVR  VECKESRIGKKPIEVPSNVTLTLEEQF
Sbjct: 9   HLPCNSRTGFAGKTQGIRLRVIPAGRVGFVRTTVECKESRIGKKPIEVPSNVTLTLEEQF 68

Query: 260 VRAKGPLGELALSYPGEVKVVKEESGKLRVYKTVETKRANQMHGLFRTLTDNIIVGVSKG 439
           ++AKGPLGEL+L+YPGEVKVVKEESGKLRV KTVETKRANQMHGLFRTLTDNIIVGVSKG
Sbjct: 69  IKAKGPLGELSLNYPGEVKVVKEESGKLRVSKTVETKRANQMHGLFRTLTDNIIVGVSKG 128

Query: 440 FDKKLQLVGVGYRAAVEGKDLVMNLGFSHPVRMAVPEGLQVKVEENTRIIVSGYDKSAIG 619
           FDKKLQLVGVGYRAAVEGKDLVMNLGFSHPVRMAVPEGL+VKVEENTRIIVSGYDKS IG
Sbjct: 129 FDKKLQLVGVGYRAAVEGKDLVMNLGFSHPVRMAVPEGLKVKVEENTRIIVSGYDKSEIG 188

Query: 620 EFAATIKKWRPPEPYKGKGIRYADEVVRRKE 712
           +FAA+IKKWRPPEPYKGKGIRYADE+VRRKE
Sbjct: 189 QFAASIKKWRPPEPYKGKGIRYADEIVRRKE 219


>ref|NP_001050139.1| Os03g0356300 [Oryza sativa (japonica cultivar-group)]
 gb|ABF96017.1| 50S ribosomal protein L6, putative, expressed [Oryza sativa
           (japonica cultivar-group)]
 dbj|BAF12053.1| Os03g0356300 [Oryza sativa (japonica cultivar-group)]
 gb|EAY90037.1| hypothetical protein OsI_011270 [Oryza sativa (indica
           cultivar-group)]
          Length = 226

 Score =  400 bits (1028), Expect = e-110
 Identities = 198/211 (93%), Positives = 206/211 (97%)
 Frame = +2

Query: 80  HLPCNSRTGFLGKTQGIRLRVIPAGRVGFVRKVVECKESRIGKKPIEVPSNVTLTLEEQF 259
           HLPCNSRTGF GKTQGIRLRVIPAGRVGFVR  VECKESRIGKKPIEVPSNVTLTLEEQF
Sbjct: 9   HLPCNSRTGFAGKTQGIRLRVIPAGRVGFVRTTVECKESRIGKKPIEVPSNVTLTLEEQF 68

Query: 260 VRAKGPLGELALSYPGEVKVVKEESGKLRVYKTVETKRANQMHGLFRTLTDNIIVGVSKG 439
           ++AKGPLGEL+L+YPGEVKVVKEESGKLRV KTVETKRANQMHGLFRTLTDNIIVGVSKG
Sbjct: 69  IKAKGPLGELSLNYPGEVKVVKEESGKLRVSKTVETKRANQMHGLFRTLTDNIIVGVSKG 128

Query: 440 FDKKLQLVGVGYRAAVEGKDLVMNLGFSHPVRMAVPEGLQVKVEENTRIIVSGYDKSAIG 619
           FDKKLQLVGVGYRAAVEGKDLVMNLGFSHPVRMAVPEGL+VKVEENTRIIVSGYDKS IG
Sbjct: 129 FDKKLQLVGVGYRAAVEGKDLVMNLGFSHPVRMAVPEGLKVKVEENTRIIVSGYDKSEIG 188

Query: 620 EFAATIKKWRPPEPYKGKGIRYADEVVRRKE 712
           +FAA+IKKWRPPEPYKGKGIRYADE+VRRKE
Sbjct: 189 QFAASIKKWRPPEPYKGKGIRYADEIVRRKE 219


>ref|NP_001051292.1| Os03g0751400 [Oryza sativa (japonica cultivar-group)]
 gb|AAO32311.1| putative chloroplast 50S ribosomal protein L6 [Oryza sativa
           Japonica Group]
 gb|AAR87250.1| putative  ribosomal protein L6 [Oryza sativa (japonica
           cultivar-group)]
 gb|ABF98910.1| 50S ribosomal protein L6, putative, expressed [Oryza sativa
           (japonica cultivar-group)]
 dbj|BAF13206.1| Os03g0751400 [Oryza sativa (japonica cultivar-group)]
 gb|EAY91881.1| hypothetical protein OsI_013114 [Oryza sativa (indica
           cultivar-group)]
 gb|EAZ28603.1| hypothetical protein OsJ_012086 [Oryza sativa (japonica
           cultivar-group)]
          Length = 226

 Score =  394 bits (1013), Expect = e-108
 Identities = 196/211 (92%), Positives = 204/211 (96%)
 Frame = +2

Query: 80  HLPCNSRTGFLGKTQGIRLRVIPAGRVGFVRKVVECKESRIGKKPIEVPSNVTLTLEEQF 259
           H PCNSRTGFLGK QGI L VIPAGRVGFVRK +ECKESRIGKKPIEVPSNVTLTLEEQF
Sbjct: 9   HHPCNSRTGFLGKRQGICLHVIPAGRVGFVRKTIECKESRIGKKPIEVPSNVTLTLEEQF 68

Query: 260 VRAKGPLGELALSYPGEVKVVKEESGKLRVYKTVETKRANQMHGLFRTLTDNIIVGVSKG 439
           ++AKGPLGEL+L+YPGEVKVVKEESGKLRV KTVETKRANQMHGLFRTLTDNIIVGVSKG
Sbjct: 69  IKAKGPLGELSLNYPGEVKVVKEESGKLRVSKTVETKRANQMHGLFRTLTDNIIVGVSKG 128

Query: 440 FDKKLQLVGVGYRAAVEGKDLVMNLGFSHPVRMAVPEGLQVKVEENTRIIVSGYDKSAIG 619
           FDKKLQLVGVGYRAAVEGKDLVMNLGFSHPVRMAVPEGL+VKVEENTRIIVSGYDKS IG
Sbjct: 129 FDKKLQLVGVGYRAAVEGKDLVMNLGFSHPVRMAVPEGLKVKVEENTRIIVSGYDKSEIG 188

Query: 620 EFAATIKKWRPPEPYKGKGIRYADEVVRRKE 712
           +FAA+IKKWRPPEPYKGKGIRYADEVVRRKE
Sbjct: 189 QFAASIKKWRPPEPYKGKGIRYADEVVRRKE 219


>ref|NP_172011.1| EMB2394 (EMBRYO DEFECTIVE 2394); structural constituent of ribosome
           [Arabidopsis thaliana]
 sp|O23049|RK6_ARATH 50S ribosomal protein L6, chloroplast precursor
 gb|AAK25975.1|AF360265_1 putative chloroplast 50S ribosomal protein L6 [Arabidopsis
           thaliana]
 gb|AAB71459.1| Similar to Mycobacterium RlpF (gb|Z84395). ESTs
           gb|T75785,gb|R30580,gb|T04698 come from this gene.
           [Arabidopsis thaliana]
 gb|AAK64135.1| putative chloroplast 50S ribosomal protein L6 [Arabidopsis
           thaliana]
 gb|AAM62933.1| putative chloroplast 50S ribosomal protein L6 [Arabidopsis
           thaliana]
          Length = 223

 Score =  305 bits (780), Expect = 3e-81
 Identities = 145/205 (70%), Positives = 176/205 (85%)
 Frame = +2

Query: 98  RTGFLGKTQGIRLRVIPAGRVGFVRKVVECKESRIGKKPIEVPSNVTLTLEEQFVRAKGP 277
           R+ FLG     ++   P  +VG+  K +ECKESRIGK+PI VPSNVT+ LE Q ++ KGP
Sbjct: 12  RSAFLGDRNVFKVSSTPFAQVGYSSKTIECKESRIGKQPIAVPSNVTIALEGQDLKVKGP 71

Query: 278 LGELALSYPGEVKVVKEESGKLRVYKTVETKRANQMHGLFRTLTDNIIVGVSKGFDKKLQ 457
           LGELAL+YP EV++ KEESG LRV KTVET+RANQMHGLFRTLTDN++VGVSKGF+KKL 
Sbjct: 72  LGELALTYPREVELTKEESGFLRVKKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLI 131

Query: 458 LVGVGYRAAVEGKDLVMNLGFSHPVRMAVPEGLQVKVEENTRIIVSGYDKSAIGEFAATI 637
           LVGVGYRA V+GK+LV+NLGFSHPV+M +P+ L+VKVEENTRI VSGYDKS IG+FAAT+
Sbjct: 132 LVGVGYRATVDGKELVLNLGFSHPVKMQIPDSLKVKVEENTRITVSGYDKSEIGQFAATV 191

Query: 638 KKWRPPEPYKGKGIRYADEVVRRKE 712
           +KWRPPEPYKGKG++Y+DE+VRRKE
Sbjct: 192 RKWRPPEPYKGKGVKYSDEIVRRKE 216


>gb|ABK21300.1| unknown [Picea sitchensis]
 gb|ABK26219.1| unknown [Picea sitchensis]
          Length = 231

 Score =  283 bits (725), Expect = 8e-75
 Identities = 139/214 (64%), Positives = 170/214 (79%), Gaps = 4/214 (1%)
 Frame = +2

Query: 83  LPCNSRTGFLGKTQGIRLR----VIPAGRVGFVRKVVECKESRIGKKPIEVPSNVTLTLE 250
           L C  R+  LG+  G++       I   ++  VR  +ECKESRIGKKP+ VP+NV +TLE
Sbjct: 11  LACALRSTLLGEDNGLKAARDRPAIAIVKLPSVRPTIECKESRIGKKPVVVPANVNITLE 70

Query: 251 EQFVRAKGPLGELALSYPGEVKVVKEESGKLRVYKTVETKRANQMHGLFRTLTDNIIVGV 430
            Q +R  G LGEL+ +YP E+KV ++ SG +++ K VET+RANQMHGLFRTLTDN++VGV
Sbjct: 71  GQHIRVNGLLGELSQTYPNEIKVERDPSGFIKISKAVETRRANQMHGLFRTLTDNMVVGV 130

Query: 431 SKGFDKKLQLVGVGYRAAVEGKDLVMNLGFSHPVRMAVPEGLQVKVEENTRIIVSGYDKS 610
           SKGF+KKLQLVGVGYRAAVEG DLVMNLGFSHPVR+AVP G++V VE NT I VSG DKS
Sbjct: 131 SKGFEKKLQLVGVGYRAAVEGSDLVMNLGFSHPVRLAVPAGIKVTVEANTSITVSGRDKS 190

Query: 611 AIGEFAATIKKWRPPEPYKGKGIRYADEVVRRKE 712
            +G+FAA I+KWRPPEPYKGKGI+YADEV+RRKE
Sbjct: 191 VVGQFAADIRKWRPPEPYKGKGIKYADEVIRRKE 224