BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst021l02
         (644 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001066312.1| Os12g0180400 [Oryza sativa (japonica cultiva...   147   5e-34
ref|NP_001067421.1| Os11g0194800 [Oryza sativa (japonica cultiva...   147   5e-34
gb|ABF70104.1| DNA-directed RNA polymerase II 8.2 kDa polypeptid...   143   7e-33
gb|ABK20909.1| unknown [Picea sitchensis] >gi|116781551|gb|ABK22...   142   1e-32
gb|ABK94963.1| unknown [Populus trichocarpa]                          142   2e-32

>ref|NP_001066312.1| Os12g0180400 [Oryza sativa (japonica cultivar-group)]
 dbj|BAF29331.1| Os12g0180400 [Oryza sativa (japonica cultivar-group)]
          Length = 72

 Score =  147 bits (371), Expect = 5e-34
 Identities = 69/71 (97%), Positives = 70/71 (98%)
 Frame = +2

Query: 83  MIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 262
           MIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1   MIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60

Query: 263 NYNTLEKTATS 295
           NYNTLEKT T+
Sbjct: 61  NYNTLEKTETA 71


>ref|NP_001067421.1| Os11g0194800 [Oryza sativa (japonica cultivar-group)]
 gb|AAX96059.1| dna-directed rna polymerase ii 8.2 kda polypeptide (ec
           2.7.7.6)(rpb10) (rp10) (abc10) [Oryza sativa (japonica
           cultivar-group)]
 gb|ABA91866.1| DNA-directed RNA polymerase II 8.2 kDa polypeptide, putative,
           expressed [Oryza sativa (japonica cultivar-group)]
 dbj|BAF27784.1| Os11g0194800 [Oryza sativa (japonica cultivar-group)]
          Length = 74

 Score =  147 bits (371), Expect = 5e-34
 Identities = 69/71 (97%), Positives = 70/71 (98%)
 Frame = +2

Query: 83  MIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 262
           MIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1   MIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60

Query: 263 NYNTLEKTATS 295
           NYNTLEKT T+
Sbjct: 61  NYNTLEKTETT 71


>gb|ABF70104.1| DNA-directed RNA polymerase II 8.2 kDa polypeptide, putative [Musa
           balbisiana]
          Length = 70

 Score =  143 bits (361), Expect = 7e-33
 Identities = 67/68 (98%), Positives = 67/68 (98%)
 Frame = +2

Query: 83  MIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 262
           MIIPVRCFTCGKVIGNKWD YLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1   MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60

Query: 263 NYNTLEKT 286
           NYNTLEKT
Sbjct: 61  NYNTLEKT 68


>gb|ABK20909.1| unknown [Picea sitchensis]
 gb|ABK22149.1| unknown [Picea sitchensis]
 gb|ABK25286.1| unknown [Picea sitchensis]
          Length = 71

 Score =  142 bits (359), Expect = 1e-32
 Identities = 66/71 (92%), Positives = 69/71 (97%)
 Frame = +2

Query: 83  MIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 262
           MIIPVRCFTCGKVIGNKWD YLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1   MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60

Query: 263 NYNTLEKTATS 295
           NYNTLE++ T+
Sbjct: 61  NYNTLERSETN 71


>gb|ABK94963.1| unknown [Populus trichocarpa]
          Length = 71

 Score =  142 bits (358), Expect = 2e-32
 Identities = 67/71 (94%), Positives = 68/71 (95%)
 Frame = +2

Query: 83  MIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 262
           MIIPVRCFTCGKVIGNKWD YLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1   MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60

Query: 263 NYNTLEKTATS 295
           NYNTLEK+  S
Sbjct: 61  NYNTLEKSEGS 71