BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst021a10
         (789 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001045683.1| Os02g0116900 [Oryza sativa (japonica cultiva...   274   4e-72
emb|CAN80281.1| hypothetical protein [Vitis vinifera] >gi|157344...   225   2e-57
gb|AAZ67517.1| 4D11_3 [Brassica rapa subsp. pekinensis]               219   1e-55
gb|ABQ32301.1| putative 15.9 kDa subunit of RNA polymerase II [A...   218   4e-55
ref|NP_196554.1| RPB15.9 (RNA polymerase II 15.9) [Arabidopsis t...   216   2e-54

>ref|NP_001045683.1| Os02g0116900 [Oryza sativa (japonica cultivar-group)]
 dbj|BAD07723.1| putative 15.9 kDa subunit of RNA polymerase II [Oryza sativa
           (japonica cultivar-group)]
 dbj|BAF07597.1| Os02g0116900 [Oryza sativa (japonica cultivar-group)]
 gb|EAY84206.1| hypothetical protein OsI_005439 [Oryza sativa (indica
           cultivar-group)]
 gb|EAZ21501.1| hypothetical protein OsJ_004984 [Oryza sativa (japonica
           cultivar-group)]
          Length = 142

 Score =  274 bits (701), Expect = 4e-72
 Identities = 136/142 (95%), Positives = 140/142 (98%)
 Frame = +1

Query: 160 MSGEEEENAAELKIGEEFLKAKCLMNCEVAIILEHKYEQIQQMSDGDPSSQVSQVFEKSL 339
           MSGEEEENAAELKIGEEFLKAKCLMNCEVAIILEHKYEQIQ MSDGDPSSQVSQVFEKSL
Sbjct: 1   MSGEEEENAAELKIGEEFLKAKCLMNCEVAIILEHKYEQIQHMSDGDPSSQVSQVFEKSL 60

Query: 340 QYVKRFSRYKNPDAVRQVRETLSRYGLAEFELCTLGNLCPDTADEATALVPSLRSGGRFQ 519
           QYVKRFSRYKNPDAVRQVRETLSRYGLAEFELCTLGNLCPDT+DEA+ALVPSLRSGGRF 
Sbjct: 61  QYVKRFSRYKNPDAVRQVRETLSRYGLAEFELCTLGNLCPDTSDEASALVPSLRSGGRFV 120

Query: 520 GDPGNDKIDKMLNDLSLIKKFE 585
           GDPG++KIDKMLNDLSLIKKFE
Sbjct: 121 GDPGSEKIDKMLNDLSLIKKFE 142


>emb|CAN80281.1| hypothetical protein [Vitis vinifera]
 emb|CAO69938.1| unnamed protein product [Vitis vinifera]
          Length = 138

 Score =  225 bits (574), Expect = 2e-57
 Identities = 115/142 (80%), Positives = 127/142 (89%)
 Frame = +1

Query: 160 MSGEEEENAAELKIGEEFLKAKCLMNCEVAIILEHKYEQIQQMSDGDPSSQVSQVFEKSL 339
           MSGEEEENAAELKIG+EFLKAKCLMNCEVA+ILEHKYEQ+QQMSD DP +QVSQVFEKSL
Sbjct: 1   MSGEEEENAAELKIGDEFLKAKCLMNCEVAVILEHKYEQLQQMSD-DPLNQVSQVFEKSL 59

Query: 340 QYVKRFSRYKNPDAVRQVRETLSRYGLAEFELCTLGNLCPDTADEATALVPSLRSGGRFQ 519
           QYVKRFSRYKNPDAVRQVRE LSRY LAEFELC LGNLCP+T +EA A+VPS+++ GR  
Sbjct: 60  QYVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAH 119

Query: 520 GDPGNDKIDKMLNDLSLIKKFE 585
            D   + I+KMLNDLSLIKKFE
Sbjct: 120 DD---EAIEKMLNDLSLIKKFE 138


>gb|AAZ67517.1| 4D11_3 [Brassica rapa subsp. pekinensis]
          Length = 138

 Score =  219 bits (558), Expect = 1e-55
 Identities = 110/142 (77%), Positives = 127/142 (89%)
 Frame = +1

Query: 160 MSGEEEENAAELKIGEEFLKAKCLMNCEVAIILEHKYEQIQQMSDGDPSSQVSQVFEKSL 339
           MSGEEEENAAELKIG+EFLKAKCLMNCEV++ILEHKYEQ+QQ+S+ DP +QVSQVFEKSL
Sbjct: 1   MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQVSE-DPMNQVSQVFEKSL 59

Query: 340 QYVKRFSRYKNPDAVRQVRETLSRYGLAEFELCTLGNLCPDTADEATALVPSLRSGGRFQ 519
           QYVKRFSRYKNPDAVRQVRE LSR+ L EFELC LGNLCP+TA+EA A+VPSL++ GR  
Sbjct: 60  QYVKRFSRYKNPDAVRQVREILSRHQLTEFELCVLGNLCPETAEEAVAMVPSLKTKGRAH 119

Query: 520 GDPGNDKIDKMLNDLSLIKKFE 585
            D   + I+KMLNDLSL+K+FE
Sbjct: 120 SD---EAIEKMLNDLSLVKRFE 138


>gb|ABQ32301.1| putative 15.9 kDa subunit of RNA polymerase II [Artemisia annua]
          Length = 138

 Score =  218 bits (554), Expect = 4e-55
 Identities = 111/142 (78%), Positives = 126/142 (88%)
 Frame = +1

Query: 160 MSGEEEENAAELKIGEEFLKAKCLMNCEVAIILEHKYEQIQQMSDGDPSSQVSQVFEKSL 339
           MSGEEEENAAELKIG+EFLKAKCLMNCEV++IL+HK EQ+Q MSD DPS+QVSQVFEKSL
Sbjct: 1   MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILDHKLEQLQAMSD-DPSNQVSQVFEKSL 59

Query: 340 QYVKRFSRYKNPDAVRQVRETLSRYGLAEFELCTLGNLCPDTADEATALVPSLRSGGRFQ 519
           QYVKRFSRYKNPDAVRQVRE LSR+ LAEFELC LGNLCP+T +EA A+VPS++S GR  
Sbjct: 60  QYVKRFSRYKNPDAVRQVRELLSRHQLAEFELCVLGNLCPETVEEAIAMVPSIKSRGRGH 119

Query: 520 GDPGNDKIDKMLNDLSLIKKFE 585
            D   + I+KMLND+SLIKKFE
Sbjct: 120 DD---EAIEKMLNDMSLIKKFE 138


>ref|NP_196554.1| RPB15.9 (RNA polymerase II 15.9) [Arabidopsis thaliana]
 gb|AAB95261.1| 15.9 kDa subunit of RNA polymerase II [Arabidopsis thaliana]
 dbj|BAB09413.1| 15.9 kDa subunit of RNA polymerase II [Arabidopsis thaliana]
 gb|AAM63291.1| 15.9 kDa subunit of RNA polymerase II [Arabidopsis thaliana]
 gb|ABF58918.1| At5g09920 [Arabidopsis thaliana]
          Length = 138

 Score =  216 bits (549), Expect = 2e-54
 Identities = 108/142 (76%), Positives = 126/142 (88%)
 Frame = +1

Query: 160 MSGEEEENAAELKIGEEFLKAKCLMNCEVAIILEHKYEQIQQMSDGDPSSQVSQVFEKSL 339
           MSGEEEENAAELKIG+EFLKAKCLMNCEV++ILEHK+EQ+QQ+S+ DP +QVSQVFEKSL
Sbjct: 1   MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKFEQLQQISE-DPMNQVSQVFEKSL 59

Query: 340 QYVKRFSRYKNPDAVRQVRETLSRYGLAEFELCTLGNLCPDTADEATALVPSLRSGGRFQ 519
           QYVKRFSRYKNPDAVRQVRE LSR+ L EFELC LGNLCP+T +EA A+VPSL++ GR  
Sbjct: 60  QYVKRFSRYKNPDAVRQVREILSRHQLTEFELCVLGNLCPETVEEAVAMVPSLKTKGRAH 119

Query: 520 GDPGNDKIDKMLNDLSLIKKFE 585
            D   + I+KMLNDLSL+K+FE
Sbjct: 120 DD---EAIEKMLNDLSLVKRFE 138