BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst018o21
         (514 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001062557.1| Os09g0103600 [Oryza sativa (japonica cultiva...    86   9e-17
gb|AAY84870.1| pre-mRNA processing factor [Triticum aestivum]          76   1e-12

>ref|NP_001062557.1| Os09g0103600 [Oryza sativa (japonica cultivar-group)]
 dbj|BAD34147.1| pre-mRNA splicing factor PRP38 protein-like [Oryza sativa (japonica
           cultivar-group)]
 dbj|BAD36695.1| pre-mRNA splicing factor PRP38 protein-like [Oryza sativa (japonica
           cultivar-group)]
 dbj|BAF24471.1| Os09g0103600 [Oryza sativa (japonica cultivar-group)]
          Length = 392

 Score = 85.5 bits (210), Expect(2) = 9e-17
 Identities = 43/62 (69%), Positives = 46/62 (74%)
 Frame = +1

Query: 55  RRRLPRAPRRSHRSRRVGAAPPLSPRGHAEDGGPREEPKKRKEKKEKKGEGNAPDPNDPE 234
           RR   R      R R  G+A   SPRGHAEDGG R+EPKKRKEKKEKKGEGNAPDPNDPE
Sbjct: 319 RRERDREDGEYRRRRDRGSA---SPRGHAEDGGSRDEPKKRKEKKEKKGEGNAPDPNDPE 375

Query: 235 IV 240
           I+
Sbjct: 376 II 377



 Score = 26.2 bits (56), Expect(2) = 9e-17
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = +3

Query: 243 MNKPHASLGLKPLK 284
           MNK  ASLGLKPLK
Sbjct: 379 MNKLRASLGLKPLK 392


>gb|AAY84870.1| pre-mRNA processing factor [Triticum aestivum]
          Length = 393

 Score = 75.9 bits (185), Expect = 1e-12
 Identities = 40/62 (64%), Positives = 43/62 (69%)
 Frame = +1

Query: 55  RRRLPRAPRRSHRSRRVGAAPPLSPRGHAEDGGPREEPKKRKEKKEKKGEGNAPDPNDPE 234
           RR   R      + R  G+A P  PRG AEDG PREEPKKRKEKKEKKG GN PDPNDPE
Sbjct: 320 RRERDREVGELRKRRGRGSASP--PRGRAEDG-PREEPKKRKEKKEKKGSGNGPDPNDPE 376

Query: 235 IV 240
           I+
Sbjct: 377 II 378