BLASTX 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst018g22 (628 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 5,815,196 sequences; 2,006,227,497 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001056713.1| Os06g0134000 [Oryza sativa (japonica cultiva... 117 3e-46 dbj|BAA02157.1| 40S subunit ribosomal protein [Oryza sativa (jap... 102 1e-41 ref|NP_201036.1| 40S ribosomal protein S20 (RPS20C) [Arabidopsis... 95 7e-39 emb|CAN62522.1| hypothetical protein [Vitis vinifera] 95 1e-38 ref|NP_001064232.1| Os10g0170200 [Oryza sativa (japonica cultiva... 93 3e-38 >ref|NP_001056713.1| Os06g0134000 [Oryza sativa (japonica cultivar-group)] sp|P35686|RS20_ORYSJ 40S ribosomal protein S20 dbj|BAD67888.1| 40S subunit ribosomal protein [Oryza sativa (japonica cultivar-group)] dbj|BAD68866.1| 40S subunit ribosomal protein [Oryza sativa (japonica cultivar-group)] dbj|BAF18627.1| Os06g0134000 [Oryza sativa (japonica cultivar-group)] gb|EAY99540.1| hypothetical protein OsI_020773 [Oryza sativa (indica cultivar-group)] gb|EAZ35731.1| hypothetical protein OsJ_019214 [Oryza sativa (japonica cultivar-group)] Length = 128 Score = 117 bits (293), Expect(2) = 3e-46 Identities = 57/67 (85%), Positives = 61/67 (91%) Frame = +2 Query: 92 AAELAYAPPMKAGKAGFEGVQEAQHRIRITLSSKSVKNLEKVCADLVKGAKDKQLRVKGP 271 AA++AYAPPMK+GK GFE QE QHRIRITLSSKSVKNLEKVC DLVKGAKDK L+VKGP Sbjct: 3 AADVAYAPPMKSGKIGFESSQEVQHRIRITLSSKSVKNLEKVCGDLVKGAKDKSLKVKGP 62 Query: 272 VRMPTKV 292 VRMPTKV Sbjct: 63 VRMPTKV 69 Score = 94.0 bits (232), Expect(2) = 3e-46 Identities = 46/48 (95%), Positives = 47/48 (97%) Frame = +1 Query: 286 QGTNTWDRFEMRVHKRVIDLVSSPDVVKQITSITIEPGVEVEVTISDQ 429 +GTNTWDRFEMRVHKRVIDLVSS DVVKQITSITIEPGVEVEVTISDQ Sbjct: 81 EGTNTWDRFEMRVHKRVIDLVSSADVVKQITSITIEPGVEVEVTISDQ 128 >dbj|BAA02157.1| 40S subunit ribosomal protein [Oryza sativa (japonica cultivar-group)] dbj|BAB61063.1| 40S ribosomal protein S20 [Oryza sativa (japonica cultivar-group)] Length = 117 Score = 102 bits (253), Expect(2) = 1e-41 Identities = 50/58 (86%), Positives = 52/58 (89%) Frame = +2 Query: 119 MKAGKAGFEGVQEAQHRIRITLSSKSVKNLEKVCADLVKGAKDKQLRVKGPVRMPTKV 292 MK+GK GFE QE QHRIRITLSSKSVKNLEKVC DLVKGAKDK L+VKGPVRMPTKV Sbjct: 1 MKSGKIGFESSQEVQHRIRITLSSKSVKNLEKVCGDLVKGAKDKSLKVKGPVRMPTKV 58 Score = 94.0 bits (232), Expect(2) = 1e-41 Identities = 46/48 (95%), Positives = 47/48 (97%) Frame = +1 Query: 286 QGTNTWDRFEMRVHKRVIDLVSSPDVVKQITSITIEPGVEVEVTISDQ 429 +GTNTWDRFEMRVHKRVIDLVSS DVVKQITSITIEPGVEVEVTISDQ Sbjct: 70 EGTNTWDRFEMRVHKRVIDLVSSADVVKQITSITIEPGVEVEVTISDQ 117 >ref|NP_201036.1| 40S ribosomal protein S20 (RPS20C) [Arabidopsis thaliana] ref|NP_190089.2| 40S ribosomal protein S20 (RPS20A) [Arabidopsis thaliana] ref|NP_001078781.1| 40S ribosomal protein S20 (RPS20C) [Arabidopsis thaliana] sp|P49200|RS201_ARATH 40S ribosomal protein S20-1 gb|AAG40369.1|AF325017_1 AT5g62300 [Arabidopsis thaliana] gb|AAK43837.1|AF370460_1 40S ribosomal protein S20 [Arabidopsis thaliana] gb|AAM20143.1| putative 40S ribsomomal protein [Arabidopsis thaliana] gb|AAM45072.1| putative 40S ribsomomal protein [Arabidopsis thaliana] gb|AAM62892.1| ribosomal protein S20-like protein [Arabidopsis thaliana] Length = 124 Score = 94.7 bits (234), Expect(2) = 7e-39 Identities = 47/59 (79%), Positives = 51/59 (86%) Frame = +2 Query: 116 PMKAGKAGFEGVQEAQHRIRITLSSKSVKNLEKVCADLVKGAKDKQLRVKGPVRMPTKV 292 PMK GKAG E E H+IRITLSSK+VKNLEKVC DLV+GAKDK+LRVKGPVRMPTKV Sbjct: 7 PMKPGKAGLEEPLEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKV 65 Score = 92.0 bits (227), Expect(2) = 7e-39 Identities = 44/52 (84%), Positives = 48/52 (92%) Frame = +1 Query: 271 RADAHQGTNTWDRFEMRVHKRVIDLVSSPDVVKQITSITIEPGVEVEVTISD 426 +A +GTNTWDRFE+RVHKRVIDL SSPDVVKQITSITIEPGVEVEVTI+D Sbjct: 72 KAPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIAD 123 >emb|CAN62522.1| hypothetical protein [Vitis vinifera] Length = 122 Score = 94.7 bits (234), Expect(2) = 1e-38 Identities = 50/64 (78%), Positives = 55/64 (85%) Frame = +2 Query: 101 LAYAPPMKAGKAGFEGVQEAQHRIRITLSSKSVKNLEKVCADLVKGAKDKQLRVKGPVRM 280 +AYA MK K G E QEA H+IRITLSSK+VKNLEKVCADLV+GAKDK+LRVKGPVRM Sbjct: 1 MAYAA-MKPTKPGLEEPQEAIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRM 59 Query: 281 PTKV 292 PTKV Sbjct: 60 PTKV 63 Score = 90.9 bits (224), Expect(2) = 1e-38 Identities = 43/47 (91%), Positives = 46/47 (97%) Frame = +1 Query: 286 QGTNTWDRFEMRVHKRVIDLVSSPDVVKQITSITIEPGVEVEVTISD 426 +GTNTWDRFE+RVHKRVIDL SSPDVVKQITSITIEPGVEVEVTI+D Sbjct: 75 EGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIAD 121 >ref|NP_001064232.1| Os10g0170200 [Oryza sativa (japonica cultivar-group)] gb|AAM74244.1|AC074355_6 Putative ribosomal protein S10p/S20e [Oryza sativa (japonica cultivar-group)] gb|AAP52338.1| 40S ribosomal protein S20, putative, expressed [Oryza sativa (japonica cultivar-group)] dbj|BAF26146.1| Os10g0170200 [Oryza sativa (japonica cultivar-group)] gb|EAZ15433.1| hypothetical protein OsJ_029642 [Oryza sativa (japonica cultivar-group)] Length = 130 Score = 93.2 bits (230), Expect(2) = 3e-38 Identities = 52/71 (73%), Positives = 56/71 (78%), Gaps = 3/71 (4%) Frame = +2 Query: 89 MAAELAYAP--PMKAGKAGFEGVQEAQ-HRIRITLSSKSVKNLEKVCADLVKGAKDKQLR 259 MAA Y MK GK G E +E Q +RIRITLSSK+VKNLEKVCADLVKGAKDKQLR Sbjct: 1 MAAAAVYGAGGAMKGGKLGMEEARELQLNRIRITLSSKNVKNLEKVCADLVKGAKDKQLR 60 Query: 260 VKGPVRMPTKV 292 VKGPVR+PTKV Sbjct: 61 VKGPVRIPTKV 71 Score = 91.3 bits (225), Expect(2) = 3e-38 Identities = 42/47 (89%), Positives = 46/47 (97%) Frame = +1 Query: 286 QGTNTWDRFEMRVHKRVIDLVSSPDVVKQITSITIEPGVEVEVTISD 426 +GTNTWDRFE R+HKRVIDL+SSPDVVKQITSITIEPGVEVEVTI+D Sbjct: 83 EGTNTWDRFEFRIHKRVIDLISSPDVVKQITSITIEPGVEVEVTIAD 129