BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst017g04
         (533 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001066312.1| Os12g0180400 [Oryza sativa (japonica cultiva...   142   1e-32
ref|NP_001067421.1| Os11g0194800 [Oryza sativa (japonica cultiva...   142   1e-32
gb|ABF70104.1| DNA-directed RNA polymerase II 8.2 kDa polypeptid...   138   2e-31
gb|ABK20909.1| unknown [Picea sitchensis] >gi|116781551|gb|ABK22...   137   3e-31
gb|ABK94963.1| unknown [Populus trichocarpa]                          137   4e-31

>ref|NP_001066312.1| Os12g0180400 [Oryza sativa (japonica cultivar-group)]
 dbj|BAF29331.1| Os12g0180400 [Oryza sativa (japonica cultivar-group)]
          Length = 72

 Score =  142 bits (357), Expect = 1e-32
 Identities = 66/67 (98%), Positives = 67/67 (100%)
 Frame = +2

Query: 68  VRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNT 247
           VRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNT
Sbjct: 5   VRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNT 64

Query: 248 LEKTETS 268
           LEKTET+
Sbjct: 65  LEKTETA 71


>ref|NP_001067421.1| Os11g0194800 [Oryza sativa (japonica cultivar-group)]
 gb|AAX96059.1| dna-directed rna polymerase ii 8.2 kda polypeptide (ec
           2.7.7.6)(rpb10) (rp10) (abc10) [Oryza sativa (japonica
           cultivar-group)]
 gb|ABA91866.1| DNA-directed RNA polymerase II 8.2 kDa polypeptide, putative,
           expressed [Oryza sativa (japonica cultivar-group)]
 dbj|BAF27784.1| Os11g0194800 [Oryza sativa (japonica cultivar-group)]
          Length = 74

 Score =  142 bits (357), Expect = 1e-32
 Identities = 66/67 (98%), Positives = 67/67 (100%)
 Frame = +2

Query: 68  VRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNT 247
           VRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNT
Sbjct: 5   VRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNT 64

Query: 248 LEKTETS 268
           LEKTET+
Sbjct: 65  LEKTETT 71


>gb|ABF70104.1| DNA-directed RNA polymerase II 8.2 kDa polypeptide, putative [Musa
           balbisiana]
          Length = 70

 Score =  138 bits (347), Expect = 2e-31
 Identities = 64/66 (96%), Positives = 65/66 (98%)
 Frame = +2

Query: 68  VRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNT 247
           VRCFTCGKVIGNKWD YLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNT
Sbjct: 5   VRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNT 64

Query: 248 LEKTET 265
           LEKTE+
Sbjct: 65  LEKTES 70


>gb|ABK20909.1| unknown [Picea sitchensis]
 gb|ABK22149.1| unknown [Picea sitchensis]
 gb|ABK25286.1| unknown [Picea sitchensis]
          Length = 71

 Score =  137 bits (345), Expect = 3e-31
 Identities = 63/67 (94%), Positives = 66/67 (98%)
 Frame = +2

Query: 68  VRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNT 247
           VRCFTCGKVIGNKWD YLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNT
Sbjct: 5   VRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNT 64

Query: 248 LEKTETS 268
           LE++ET+
Sbjct: 65  LERSETN 71


>gb|ABK94963.1| unknown [Populus trichocarpa]
          Length = 71

 Score =  137 bits (344), Expect = 4e-31
 Identities = 64/67 (95%), Positives = 65/67 (97%)
 Frame = +2

Query: 68  VRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNT 247
           VRCFTCGKVIGNKWD YLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNT
Sbjct: 5   VRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNT 64

Query: 248 LEKTETS 268
           LEK+E S
Sbjct: 65  LEKSEGS 71