BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst016b14
         (789 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O48609|RRP3_HORVU Plastid-specific 30S ribosomal protein 3, c...   193   1e-47
gb|ABR25501.1| plastid-specific 30S ribosomal protein [Oryza sat...   186   1e-45
ref|NP_001052994.1| Os04g0461100 [Oryza sativa (japonica cultiva...   186   1e-45
emb|CAN68341.1| hypothetical protein [Vitis vinifera]                 148   3e-34
sp|P82412|RRP3_SPIOL Plastid-specific 30S ribosomal protein 3, c...   148   3e-34

>sp|O48609|RRP3_HORVU Plastid-specific 30S ribosomal protein 3, chloroplast precursor
           (PSRP-3)
 emb|CAA10984.1| hypothetical protein [Hordeum vulgare subsp. vulgare]
          Length = 181

 Score =  193 bits (490), Expect = 1e-47
 Identities = 105/174 (60%), Positives = 110/174 (63%), Gaps = 1/174 (0%)
 Frame = +3

Query: 45  MLLMSVHPVTTPALASRAHLXXXXXXXXXXLR-LVHFKXXXXXXXXXXXXXXXXXXXXXX 221
           ML MSVHP TTPALASR  +             LVH K                      
Sbjct: 1   MLPMSVHPATTPALASRPRVSLPRPSTPSSSSSLVHLKSRRPPLRSLRSLTAAAAAAAVE 60

Query: 222 XXXXXXXXXXXXXXXXXXXXVSVEEGEEYKVQVPERQDPMLVLKFIWMEKNIGIALDQMI 401
                                +V E EEYKV+VPE+QDPMLVLKFIWMEKNIGIALDQM+
Sbjct: 61  AGEPYFGLGDDEPLGGEGDAEAVVESEEYKVEVPEKQDPMLVLKFIWMEKNIGIALDQMV 120

Query: 402 PGYGSIPLSPYYFWPRKDAWEELRAKLEEKEWISQKQMIILLNQATDIINLWQQ 563
           PG GSIPLSPYYFWPRKDAWEELRAKLEEKEWISQKQMIILLNQATDIINLWQQ
Sbjct: 121 PGVGSIPLSPYYFWPRKDAWEELRAKLEEKEWISQKQMIILLNQATDIINLWQQ 174


>gb|ABR25501.1| plastid-specific 30S ribosomal protein [Oryza sativa (indica
           cultivar-group)]
          Length = 176

 Score =  186 bits (472), Expect = 1e-45
 Identities = 86/91 (94%), Positives = 90/91 (98%)
 Frame = +3

Query: 291 EEGEEYKVQVPERQDPMLVLKFIWMEKNIGIALDQMIPGYGSIPLSPYYFWPRKDAWEEL 470
           EE +EYKV+VPERQDPMLVLKFIWMEKNIGIALDQ++PGYGSIPLSPYYFWPRKDAWEEL
Sbjct: 79  EEAQEYKVKVPERQDPMLVLKFIWMEKNIGIALDQLVPGYGSIPLSPYYFWPRKDAWEEL 138

Query: 471 RAKLEEKEWISQKQMIILLNQATDIINLWQQ 563
           RAKLEEKEWISQKQMIILLNQATDIINLWQQ
Sbjct: 139 RAKLEEKEWISQKQMIILLNQATDIINLWQQ 169


>ref|NP_001052994.1| Os04g0461100 [Oryza sativa (japonica cultivar-group)]
 emb|CAD40987.2| OSJNBa0072F16.12 [Oryza sativa (japonica cultivar-group)]
 dbj|BAF14908.1| Os04g0461100 [Oryza sativa (japonica cultivar-group)]
 emb|CAH67455.1| H0219H12.12 [Oryza sativa (indica cultivar-group)]
 gb|EAY94407.1| hypothetical protein OsI_015640 [Oryza sativa (indica
           cultivar-group)]
 gb|EAZ30981.1| hypothetical protein OsJ_014464 [Oryza sativa (japonica
           cultivar-group)]
          Length = 183

 Score =  186 bits (472), Expect = 1e-45
 Identities = 86/91 (94%), Positives = 90/91 (98%)
 Frame = +3

Query: 291 EEGEEYKVQVPERQDPMLVLKFIWMEKNIGIALDQMIPGYGSIPLSPYYFWPRKDAWEEL 470
           EE +EYKV+VPERQDPMLVLKFIWMEKNIGIALDQ++PGYGSIPLSPYYFWPRKDAWEEL
Sbjct: 86  EEAQEYKVKVPERQDPMLVLKFIWMEKNIGIALDQLVPGYGSIPLSPYYFWPRKDAWEEL 145

Query: 471 RAKLEEKEWISQKQMIILLNQATDIINLWQQ 563
           RAKLEEKEWISQKQMIILLNQATDIINLWQQ
Sbjct: 146 RAKLEEKEWISQKQMIILLNQATDIINLWQQ 176


>emb|CAN68341.1| hypothetical protein [Vitis vinifera]
          Length = 179

 Score =  148 bits (374), Expect = 3e-34
 Identities = 68/94 (72%), Positives = 80/94 (85%)
 Frame = +3

Query: 282 VSVEEGEEYKVQVPERQDPMLVLKFIWMEKNIGIALDQMIPGYGSIPLSPYYFWPRKDAW 461
           +S EE E+ +V V   + P LVLKF+WMEKNIG+ALDQ+IPGYG+ PLSPYYFWP KDAW
Sbjct: 80  ISSEENEKVEVIVKVMETPRLVLKFVWMEKNIGVALDQVIPGYGTNPLSPYYFWPGKDAW 139

Query: 462 EELRAKLEEKEWISQKQMIILLNQATDIINLWQQ 563
           EEL++ LE K WISQK+MIILLN+ATDIINLWQQ
Sbjct: 140 EELKSTLESKPWISQKKMIILLNEATDIINLWQQ 173


>sp|P82412|RRP3_SPIOL Plastid-specific 30S ribosomal protein 3, chloroplast precursor
           (PSRP-3)
 gb|AAF64163.1|AF239218_1 plastid-specific ribosomal protein 3 precursor [Spinacia oleracea]
          Length = 179

 Score =  148 bits (374), Expect = 3e-34
 Identities = 69/88 (78%), Positives = 75/88 (85%)
 Frame = +3

Query: 300 EEYKVQVPERQDPMLVLKFIWMEKNIGIALDQMIPGYGSIPLSPYYFWPRKDAWEELRAK 479
           E+ KV V     P LVLKFIWMEKNIG+ALDQ IPG+G++PLSPYYFWPRKDAWEEL+  
Sbjct: 85  EKLKVLVKPMDKPRLVLKFIWMEKNIGLALDQTIPGHGTVPLSPYYFWPRKDAWEELKVL 144

Query: 480 LEEKEWISQKQMIILLNQATDIINLWQQ 563
           LE K WISQKQMIILLNQATDIINLWQQ
Sbjct: 145 LENKPWISQKQMIILLNQATDIINLWQQ 172