BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst016a07
         (596 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAC84637.1| putative small nuclear ribonucleoprotein E [Oryz...   136   9e-31
ref|NP_001050345.1| Os03g0410900 [Oryza sativa (japonica cultiva...   130   4e-29
gb|AAK55776.1|AC079038_10 Putative small nuclear ribonucleoprote...   130   7e-29
ref|NP_179971.1| small nuclear ribonucleoprotein G, putative / s...   127   4e-28
emb|CAO15893.1| unnamed protein product [Vitis vinifera]              127   6e-28

>dbj|BAC84637.1| putative small nuclear ribonucleoprotein E [Oryza sativa (japonica
           cultivar-group)]
          Length = 80

 Score =  136 bits (342), Expect = 9e-31
 Identities = 70/81 (86%), Positives = 73/81 (90%)
 Frame = +1

Query: 115 MSRSGQPPDLKKYMDKKLQSN*LNANRIVTCMLQGFDQFMNLVVDNTVEVNGNNKNDIGM 294
           MSRSGQPPDLKKYMDKKLQ   LNANR+V   L+GFDQFMNLVVDNTVEVNGN KNDIGM
Sbjct: 1   MSRSGQPPDLKKYMDKKLQIK-LNANRVVIGTLRGFDQFMNLVVDNTVEVNGNEKNDIGM 59

Query: 295 LVIRGNSVVMIEALEPVAKPQ 357
           +VIRGNSVVMIEALEPV KPQ
Sbjct: 60  VVIRGNSVVMIEALEPVPKPQ 80


>ref|NP_001050345.1| Os03g0410900 [Oryza sativa (japonica cultivar-group)]
 gb|AAR06315.1| putative small nuclear ribonucleoprotein polypeptide G [Oryza
           sativa (japonica cultivar-group)]
 gb|ABF96561.1| small nuclear ribonucleoprotein G, putative, expressed [Oryza
           sativa (japonica cultivar-group)]
 dbj|BAF12259.1| Os03g0410900 [Oryza sativa (japonica cultivar-group)]
 gb|EAY90425.1| hypothetical protein OsI_011658 [Oryza sativa (indica
           cultivar-group)]
 gb|EAZ27299.1| hypothetical protein OsJ_010782 [Oryza sativa (japonica
           cultivar-group)]
          Length = 80

 Score =  130 bits (328), Expect = 4e-29
 Identities = 66/81 (81%), Positives = 72/81 (88%)
 Frame = +1

Query: 115 MSRSGQPPDLKKYMDKKLQSN*LNANRIVTCMLQGFDQFMNLVVDNTVEVNGNNKNDIGM 294
           MSRSGQPPDLKKYMDKKLQ   LNANR++   L+GFDQFMNLVVDNTVEVNGN+K DIGM
Sbjct: 1   MSRSGQPPDLKKYMDKKLQIK-LNANRVIVGTLRGFDQFMNLVVDNTVEVNGNDKTDIGM 59

Query: 295 LVIRGNSVVMIEALEPVAKPQ 357
           +V+RGNSVVMIEALEPV K Q
Sbjct: 60  VVVRGNSVVMIEALEPVPKSQ 80


>gb|AAK55776.1|AC079038_10 Putative small nuclear ribonucleoprotein G [Oryza sativa]
 gb|EAZ04669.1| hypothetical protein OsI_025901 [Oryza sativa (indica
           cultivar-group)]
 gb|EAZ40611.1| hypothetical protein OsJ_024094 [Oryza sativa (japonica
           cultivar-group)]
          Length = 94

 Score =  130 bits (326), Expect = 7e-29
 Identities = 70/94 (74%), Positives = 74/94 (78%), Gaps = 13/94 (13%)
 Frame = +1

Query: 115 MSRSGQPPDLKKYMDKKLQSN*-------------LNANRIVTCMLQGFDQFMNLVVDNT 255
           MSRSGQPPDLKKYMDKKLQ+               LNANR+V   L+GFDQFMNLVVDNT
Sbjct: 1   MSRSGQPPDLKKYMDKKLQTLMVYSFTLFSILPVKLNANRVVIGTLRGFDQFMNLVVDNT 60

Query: 256 VEVNGNNKNDIGMLVIRGNSVVMIEALEPVAKPQ 357
           VEVNGN KNDIGM+VIRGNSVVMIEALEPV KPQ
Sbjct: 61  VEVNGNEKNDIGMVVIRGNSVVMIEALEPVPKPQ 94


>ref|NP_179971.1| small nuclear ribonucleoprotein G, putative / snRNP-G, putative /
           Sm protein G, putative [Arabidopsis thaliana]
 sp|O82221|RUXG_ARATH Probable small nuclear ribonucleoprotein G (snRNP-G) (Sm protein G)
           (Sm-G) (SmG)
 gb|AAC63663.1| putative small nuclear ribonucleoprotein E [Arabidopsis thaliana]
 gb|AAM65796.1| putative small nuclear ribonucleoprotein E [Arabidopsis thaliana]
 gb|AAN72046.1| putative small nuclear ribonucleoprotein E [Arabidopsis thaliana]
 gb|AAP21306.1| At2g23930 [Arabidopsis thaliana]
          Length = 80

 Score =  127 bits (319), Expect = 4e-28
 Identities = 64/79 (81%), Positives = 71/79 (89%)
 Frame = +1

Query: 115 MSRSGQPPDLKKYMDKKLQSN*LNANRIVTCMLQGFDQFMNLVVDNTVEVNGNNKNDIGM 294
           MSRSGQPPDLKKYMDKKLQ   LNANR+VT  L+GFDQFMNLVVDNTVEVNGN+K DIGM
Sbjct: 1   MSRSGQPPDLKKYMDKKLQIK-LNANRMVTGTLRGFDQFMNLVVDNTVEVNGNDKTDIGM 59

Query: 295 LVIRGNSVVMIEALEPVAK 351
           +VIRGNS+V +EALEPV +
Sbjct: 60  VVIRGNSIVTVEALEPVGR 78


>emb|CAO15893.1| unnamed protein product [Vitis vinifera]
          Length = 80

 Score =  127 bits (318), Expect = 6e-28
 Identities = 65/81 (80%), Positives = 71/81 (87%)
 Frame = +1

Query: 115 MSRSGQPPDLKKYMDKKLQSN*LNANRIVTCMLQGFDQFMNLVVDNTVEVNGNNKNDIGM 294
           MSRSGQPPDLKKYMDKKLQ   LNANR+V   L+GFDQFMNLVVDNTVEVNGN K DIGM
Sbjct: 1   MSRSGQPPDLKKYMDKKLQIK-LNANRMVVGTLRGFDQFMNLVVDNTVEVNGNEKTDIGM 59

Query: 295 LVIRGNSVVMIEALEPVAKPQ 357
           +VIRGNSVV +EALEPV++ Q
Sbjct: 60  VVIRGNSVVTVEALEPVSRMQ 80