BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst014j20
         (515 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001104891.1| ribosomal protein L30 [Zea mays] >gi|6094049...   162   6e-39
gb|EAY73492.1| hypothetical protein OsI_001339 [Oryza sativa (in...   158   1e-37
ref|NP_001042724.1| Os01g0276000 [Oryza sativa (japonica cultiva...   154   2e-36
ref|NP_001055897.1| Os05g0490100 [Oryza sativa (japonica cultiva...   144   2e-33
gb|EAZ34764.1| hypothetical protein OsJ_018247 [Oryza sativa (ja...   140   3e-32

>ref|NP_001104891.1| ribosomal protein L30 [Zea mays]
 sp|O48558|RL30_MAIZE 60S ribosomal protein L30
 gb|AAB88620.1| ribosomal protein L30 [Zea mays]
          Length = 112

 Score =  162 bits (411), Expect = 6e-39
 Identities = 86/112 (76%), Positives = 88/112 (78%), Gaps = 23/112 (20%)
 Frame = +1

Query: 88  MVAAKKTKKSTDNINNKLQLVMKSGKYTLGYKTVLRTIRNSKSKLVIIANNCPPLRKSEI 267
           MVA KKTKKSTDNINNKLQLVMKSGKYTLGYKTVLRT+RNSKSKLVIIANNCPPLRKSEI
Sbjct: 1   MVATKKTKKSTDNINNKLQLVMKSGKYTLGYKTVLRTLRNSKSKLVIIANNCPPLRKSEI 60

Query: 268 EYYAMLAKVTVHHFHGS-----------------------DSDIIKTTPGEQ 354
           EYYAMLAKVTVHHFHG+                       DSDIIKTTPGEQ
Sbjct: 61  EYYAMLAKVTVHHFHGNNVDLGTACGKYFRVCCLSIIDPGDSDIIKTTPGEQ 112


>gb|EAY73492.1| hypothetical protein OsI_001339 [Oryza sativa (indica
           cultivar-group)]
 gb|EAZ11415.1| hypothetical protein OsJ_001240 [Oryza sativa (japonica
           cultivar-group)]
          Length = 136

 Score =  158 bits (400), Expect = 1e-37
 Identities = 94/143 (65%), Positives = 105/143 (73%), Gaps = 1/143 (0%)
 Frame = +1

Query: 88  MVAAKKTKKSTDNINNKLQLVMKSGKYTLGYKTVLRTIRNSKSKLVIIANNCPPLRKSEI 267
           MVAAKKTKKSTDNINNKLQLVMKSGKYTLGYKTVLRT+RNSK+KLVII+NNCPPLRKSEI
Sbjct: 1   MVAAKKTKKSTDNINNKLQLVMKSGKYTLGYKTVLRTLRNSKAKLVIISNNCPPLRKSEI 60

Query: 268 EYYAMLAKVTVHHFHGSDSDIIKTTPGEQ*GTVPVARRMRHLSCPIHCSSCWT*FGLVY* 447
           EYYAMLAKVTVHHFHG++ D + T  G+         R+  LS      S      ++  
Sbjct: 61  EYYAMLAKVTVHHFHGNNVD-LGTACGKY-------FRVCCLSIIDPGDS-----DIIKT 107

Query: 448 TAFTSQPSFVGT-SFWIINFVPG 513
           TAFTSQP F G     + NFVPG
Sbjct: 108 TAFTSQPKFRGNIVLGLENFVPG 130


>ref|NP_001042724.1| Os01g0276000 [Oryza sativa (japonica cultivar-group)]
 sp|Q9SDG6|RL30_ORYSJ 60S ribosomal protein L30
 dbj|BAA88178.1| putative ribosomal protein L30 [Oryza sativa (japonica
           cultivar-group)]
 dbj|BAF04638.1| Os01g0276000 [Oryza sativa (japonica cultivar-group)]
          Length = 111

 Score =  154 bits (390), Expect = 2e-36
 Identities = 84/112 (75%), Positives = 88/112 (78%), Gaps = 23/112 (20%)
 Frame = +1

Query: 88  MVAAKKTKKSTDNINNKLQLVMKSGKYTLGYKTVLRTIRNSKSKLVIIANNCPPLRKSEI 267
           MVAAKKTKKSTDNINNKLQLVMKSGKYTLGYKTVLRT+RNSK+KLVII+NNCPPLRKSEI
Sbjct: 1   MVAAKKTKKSTDNINNKLQLVMKSGKYTLGYKTVLRTLRNSKAKLVIISNNCPPLRKSEI 60

Query: 268 EYYAMLAKVTVHHFHGS-----------------------DSDIIKTTPGEQ 354
           EYYAMLAKVTVHHFHG+                       DSDIIKTT GEQ
Sbjct: 61  EYYAMLAKVTVHHFHGNNVDLGTACGKYFRVCCLSIIDPGDSDIIKTT-GEQ 111


>ref|NP_001055897.1| Os05g0490100 [Oryza sativa (japonica cultivar-group)]
 gb|AAT69635.1| putative 60S ribosomal protein L30 [Oryza sativa (japonica
           cultivar-group)]
 gb|AAT77294.1| putative 60S ribosomal protein L30 [Oryza sativa (japonica
           cultivar-group)]
 dbj|BAF17811.1| Os05g0490100 [Oryza sativa (japonica cultivar-group)]
          Length = 112

 Score =  144 bits (363), Expect = 2e-33
 Identities = 74/112 (66%), Positives = 80/112 (71%), Gaps = 23/112 (20%)
 Frame = +1

Query: 88  MVAAKKTKKSTDNINNKLQLVMKSGKYTLGYKTVLRTIRNSKSKLVIIANNCPPLRKSEI 267
           M   KK KKSTDNINNKLQLVMKSGKYTLGYKTVL+T+RNSK KL+I+ANNCPPLRKSEI
Sbjct: 1   MAPTKKAKKSTDNINNKLQLVMKSGKYTLGYKTVLKTLRNSKGKLIILANNCPPLRKSEI 60

Query: 268 EYYAMLAKVTVHHFHGS-----------------------DSDIIKTTPGEQ 354
           EYYAML KV+VHHFHG+                       DSDII TTP  Q
Sbjct: 61  EYYAMLGKVSVHHFHGNNVDLGTACGKYYRVCCLSIIDPGDSDIINTTPASQ 112


>gb|EAZ34764.1| hypothetical protein OsJ_018247 [Oryza sativa (japonica
           cultivar-group)]
          Length = 153

 Score =  140 bits (354), Expect = 3e-32
 Identities = 73/111 (65%), Positives = 79/111 (71%), Gaps = 23/111 (20%)
 Frame = +1

Query: 91  VAAKKTKKSTDNINNKLQLVMKSGKYTLGYKTVLRTIRNSKSKLVIIANNCPPLRKSEIE 270
           V A   KKSTDNINNKLQLVMKSGKYTLGYKTVL+T+RNSK KL+I+ANNCPPLRKSEIE
Sbjct: 43  VVAMMQKKSTDNINNKLQLVMKSGKYTLGYKTVLKTLRNSKGKLIILANNCPPLRKSEIE 102

Query: 271 YYAMLAKVTVHHFHGS-----------------------DSDIIKTTPGEQ 354
           YYAML KV+VHHFHG+                       DSDII TTP  Q
Sbjct: 103 YYAMLGKVSVHHFHGNNVDLGTACGKYYRVCCLSIIDPGDSDIINTTPASQ 153