BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst014e18
         (962 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF95465.1| RNA recognition motif family protein, expressed [...   299   2e-79
ref|NP_001049846.1| Os03g0298800 [Oryza sativa (japonica cultiva...   299   2e-79
emb|CAO21358.1| unnamed protein product [Vitis vinifera]              255   3e-66
gb|AAA33847.1| spliceosomal protein                                   251   4e-65
gb|ABM84945.1| small nuclear ribonucleoprotein polypeptide B'' [...   177   1e-42

>gb|ABF95465.1| RNA recognition motif family protein, expressed [Oryza sativa
           (japonica cultivar-group)]
          Length = 231

 Score =  299 bits (765), Expect = 2e-79
 Identities = 161/233 (69%), Positives = 168/233 (72%)
 Frame = +2

Query: 95  MLSGDIPPSQTVYXXXXXXXXXXXXXXXSLYALCSQYGRILDIVALKTPKLRGQAWVAFS 274
           MLSGDIPP+QTVY               SLYALCSQYGRILD+VALKTPKLRGQAWV FS
Sbjct: 1   MLSGDIPPNQTVYLRNLNEKVKKEELKRSLYALCSQYGRILDVVALKTPKLRGQAWVVFS 60

Query: 275 EITAATNAFRGLQDFDFYGKRMRVQYAKTKSDCIAKADGSYAPXXXXXXXXXXXXXXXXX 454
           EITAATNAFRGLQ+FDFYGKRMRVQYAKT+SDC+A  DGS AP                 
Sbjct: 61  EITAATNAFRGLQEFDFYGKRMRVQYAKTRSDCLATEDGSTAP--KEKRKKQEEKAEKKR 118

Query: 455 XXXXXXXXXXXXXXXSNGTGNQASRLGKXXXXXXXXXNNILFIQNLPDQTTSMMLQILFQ 634
                          SNGTG QASRLGK         NNILFIQNLP +TTSMMLQILFQ
Sbjct: 119 RAEEAQQSGPNAAAQSNGTGYQASRLGKTSQEPPAPPNNILFIQNLPAETTSMMLQILFQ 178

Query: 635 QLPGFREVRMIEAKPGIAFVEYEDDGQSMEAMQALQGFKITPHNPMAISYAKK 793
           Q PGFREVRMIEAKPGIAFVEYEDD QSM AMQALQGFKITP+NPMAISYAKK
Sbjct: 179 QYPGFREVRMIEAKPGIAFVEYEDDSQSMVAMQALQGFKITPYNPMAISYAKK 231


>ref|NP_001049846.1| Os03g0298800 [Oryza sativa (japonica cultivar-group)]
 gb|ABF95464.1| RNA recognition motif family protein, expressed [Oryza sativa
           (japonica cultivar-group)]
 dbj|BAF11760.1| Os03g0298800 [Oryza sativa (japonica cultivar-group)]
          Length = 232

 Score =  299 bits (765), Expect = 2e-79
 Identities = 161/233 (69%), Positives = 168/233 (72%)
 Frame = +2

Query: 95  MLSGDIPPSQTVYXXXXXXXXXXXXXXXSLYALCSQYGRILDIVALKTPKLRGQAWVAFS 274
           MLSGDIPP+QTVY               SLYALCSQYGRILD+VALKTPKLRGQAWV FS
Sbjct: 1   MLSGDIPPNQTVYLRNLNEKVKKEELKRSLYALCSQYGRILDVVALKTPKLRGQAWVVFS 60

Query: 275 EITAATNAFRGLQDFDFYGKRMRVQYAKTKSDCIAKADGSYAPXXXXXXXXXXXXXXXXX 454
           EITAATNAFRGLQ+FDFYGKRMRVQYAKT+SDC+A  DGS AP                 
Sbjct: 61  EITAATNAFRGLQEFDFYGKRMRVQYAKTRSDCLATEDGSTAP-KEKRKKQEEKAAEKKR 119

Query: 455 XXXXXXXXXXXXXXXSNGTGNQASRLGKXXXXXXXXXNNILFIQNLPDQTTSMMLQILFQ 634
                          SNGTG QASRLGK         NNILFIQNLP +TTSMMLQILFQ
Sbjct: 120 RAEEAQQSGPNAAAQSNGTGYQASRLGKTSQEPPAPPNNILFIQNLPAETTSMMLQILFQ 179

Query: 635 QLPGFREVRMIEAKPGIAFVEYEDDGQSMEAMQALQGFKITPHNPMAISYAKK 793
           Q PGFREVRMIEAKPGIAFVEYEDD QSM AMQALQGFKITP+NPMAISYAKK
Sbjct: 180 QYPGFREVRMIEAKPGIAFVEYEDDSQSMVAMQALQGFKITPYNPMAISYAKK 232


>emb|CAO21358.1| unnamed protein product [Vitis vinifera]
          Length = 234

 Score =  255 bits (652), Expect = 3e-66
 Identities = 138/234 (58%), Positives = 155/234 (66%), Gaps = 1/234 (0%)
 Frame = +2

Query: 95  MLSGDIPPSQTVYXXXXXXXXXXXXXXXSLYALCSQYGRILDIVALKTPKLRGQAWVAFS 274
           MLSGDIPP+Q++Y               SLY L SQYGRILD+VALKTPKLRGQAWV FS
Sbjct: 1   MLSGDIPPNQSIYIKNLNEKVKKEELKRSLYCLFSQYGRILDVVALKTPKLRGQAWVVFS 60

Query: 275 EITAATNAFRGLQDFDFYGKRMRVQYAKTKSDCIAKADGSYAPXXXXXXXXXXXXXXXXX 454
           E+TAA+NA R +Q+F FY K MRVQYAKTKSDC+AKADG++ P                 
Sbjct: 61  EVTAASNAVRQMQNFPFYDKPMRVQYAKTKSDCVAKADGTFVPREKKKKQEEKAEKKRRA 120

Query: 455 XXXXXXXXXXXXXXXSNGTGNQASRLG-KXXXXXXXXXNNILFIQNLPDQTTSMMLQILF 631
                          +NG      R G +         NNILFIQNLP QTTSMMLQ+LF
Sbjct: 121 EEAQQSGNANGRNAETNGGPTPPFRQGNQGAREPEAAPNNILFIQNLPHQTTSMMLQVLF 180

Query: 632 QQLPGFREVRMIEAKPGIAFVEYEDDGQSMEAMQALQGFKITPHNPMAISYAKK 793
           QQ PGFREVRMIEAKPGIAFVE+EDD QS  AM+ALQGFKITP NPMAI+YAKK
Sbjct: 181 QQYPGFREVRMIEAKPGIAFVEFEDDVQSSMAMEALQGFKITPQNPMAIAYAKK 234


>gb|AAA33847.1| spliceosomal protein
          Length = 231

 Score =  251 bits (642), Expect = 4e-65
 Identities = 136/233 (58%), Positives = 156/233 (66%)
 Frame = +2

Query: 95  MLSGDIPPSQTVYXXXXXXXXXXXXXXXSLYALCSQYGRILDIVALKTPKLRGQAWVAFS 274
           ML+GDIPP+QT+Y               SLY L SQYGRI+DIVALKTPKLRGQ+WV FS
Sbjct: 2   MLTGDIPPNQTIYIKNLNEKVKKEELKRSLYCLFSQYGRIVDIVALKTPKLRGQSWVVFS 61

Query: 275 EITAATNAFRGLQDFDFYGKRMRVQYAKTKSDCIAKADGSYAPXXXXXXXXXXXXXXXXX 454
           E+TAA+NA R +Q+F FY K MR+QYAK+KSDCIAKA+G+Y                   
Sbjct: 62  EVTAASNAVRQMQNFPFYDKPMRIQYAKSKSDCIAKAEGTY---DKKKKQDEKVEKRKRT 118

Query: 455 XXXXXXXXXXXXXXXSNGTGNQASRLGKXXXXXXXXXNNILFIQNLPDQTTSMMLQILFQ 634
                          SNG    ASR GK         NNILFIQNLP +TTSMML++LF+
Sbjct: 119 EETPQTGAANGPRTDSNGGPAAASRQGKPSAQDVAEPNNILFIQNLPHETTSMMLEVLFK 178

Query: 635 QLPGFREVRMIEAKPGIAFVEYEDDGQSMEAMQALQGFKITPHNPMAISYAKK 793
           Q PGFREVRMIEAKPGIAFVE++DD QS  AMQALQGFKITP NPMAI+YAKK
Sbjct: 179 QYPGFREVRMIEAKPGIAFVEFDDDVQSSVAMQALQGFKITPQNPMAITYAKK 231


>gb|ABM84945.1| small nuclear ribonucleoprotein polypeptide B'' [synthetic
           construct]
          Length = 225

 Score =  177 bits (448), Expect = 1e-42
 Identities = 102/232 (43%), Positives = 130/232 (56%), Gaps = 3/232 (1%)
 Frame = +2

Query: 107 DIPPSQTVYXXXXXXXXXXXXXXXSLYALCSQYGRILDIVALKTPKLRGQAWVAFSEITA 286
           DI P+ T+Y               SLYAL SQ+G ++DIVALKT K+RGQA+V F E+ +
Sbjct: 2   DIRPNHTIYINNMNDKIKKEELKRSLYALFSQFGHVVDIVALKTMKMRGQAFVIFKELGS 61

Query: 287 ATNAFRGLQDFDFYGKRMRVQYAKTKSDCIAKADGSYAPXXXXXXXXXXXXXXXXXXXXX 466
           +TNA R LQ F FYGK MR+QYAKT SD I+K  G++A                      
Sbjct: 62  STNALRQLQGFPFYGKPMRIQYAKTDSDIISKMRGTFADKEKKKEKKKAKTVEQTATTTN 121

Query: 467 XXXXXXXXXXXSNGTGNQASRLGKXXXXXXXXX---NNILFIQNLPDQTTSMMLQILFQQ 637
                        GT N A+  G             N ILF+ NLP++T  MML +LF Q
Sbjct: 122 KKS--------GQGTPNSANTQGNSTPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQ 173

Query: 638 LPGFREVRMIEAKPGIAFVEYEDDGQSMEAMQALQGFKITPHNPMAISYAKK 793
            PGF+EVR++  +  IAFVE+E+DGQ+  A  ALQGFKITP + M I+YAKK
Sbjct: 174 FPGFKEVRLVPGRHDIAFVEFENDGQAGAARDALQGFKITPSHAMKITYAKK 225