BLASTX 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst013b23 (879 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 5,815,196 sequences; 2,006,227,497 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001043555.1| Os01g0612200 [Oryza sativa (japonica cultiva... 204 8e-51 gb|EAZ12667.1| hypothetical protein OsJ_002492 [Oryza sativa (ja... 194 5e-48 ref|NP_001056771.1| Os06g0142700 [Oryza sativa (japonica cultiva... 181 7e-44 gb|ABK95853.1| unknown [Populus trichocarpa] 164 7e-39 dbj|BAF30480.1| cytochrome c oxidase subunit Vb [Pisum sativum] 162 3e-38 >ref|NP_001043555.1| Os01g0612200 [Oryza sativa (japonica cultivar-group)] dbj|BAA12797.1| cytochrome c oxidase subunit Vb precursor [Oryza sativa (japonica cultivar-group)] dbj|BAB93273.1| putative cytochrome c oxidase-related [Oryza sativa (japonica cultivar-group)] dbj|BAF05469.1| Os01g0612200 [Oryza sativa (japonica cultivar-group)] Length = 169 Score = 204 bits (518), Expect = 8e-51 Identities = 97/105 (92%), Positives = 100/105 (95%) Frame = +2 Query: 287 TSPLLSEDKPAAARVEDVIPIATGLEREELEAELQGKKRFDMDPPVGPFGTKEAPAVIES 466 TSPLLS DKPA VEDV+PIATGLEREEL AEL+G+KRFDMDPPVGPFGTKEAPAVIES Sbjct: 50 TSPLLSGDKPAT--VEDVMPIATGLEREELAAELKGEKRFDMDPPVGPFGTKEAPAVIES 107 Query: 467 YYNKRIVGCPGGEGEDEHDVVWFWLKKDEPHECPVCSQYFVLKVI 601 YYNKRIVGCPGGEGEDEHDVVWFWLKKDEPHECPVCSQYFVLKVI Sbjct: 108 YYNKRIVGCPGGEGEDEHDVVWFWLKKDEPHECPVCSQYFVLKVI 152 >gb|EAZ12667.1| hypothetical protein OsJ_002492 [Oryza sativa (japonica cultivar-group)] Length = 209 Score = 194 bits (494), Expect = 5e-48 Identities = 92/100 (92%), Positives = 95/100 (95%) Frame = +2 Query: 302 SEDKPAAARVEDVIPIATGLEREELEAELQGKKRFDMDPPVGPFGTKEAPAVIESYYNKR 481 S DKPA VEDV+PIATGLEREEL AEL+G+KRFDMDPPVGPFGTKEAPAVIESYYNKR Sbjct: 95 SGDKPAT--VEDVMPIATGLEREELAAELKGEKRFDMDPPVGPFGTKEAPAVIESYYNKR 152 Query: 482 IVGCPGGEGEDEHDVVWFWLKKDEPHECPVCSQYFVLKVI 601 IVGCPGGEGEDEHDVVWFWLKKDEPHECPVCSQYFVLKVI Sbjct: 153 IVGCPGGEGEDEHDVVWFWLKKDEPHECPVCSQYFVLKVI 192 >ref|NP_001056771.1| Os06g0142700 [Oryza sativa (japonica cultivar-group)] dbj|BAA83574.1| putative cytochrome c oxidase subunit Vb precursor [Oryza sativa (japonica cultivar-group)] dbj|BAF18685.1| Os06g0142700 [Oryza sativa (japonica cultivar-group)] gb|EAY99612.1| hypothetical protein OsI_020845 [Oryza sativa (indica cultivar-group)] gb|EAZ35796.1| hypothetical protein OsJ_019279 [Oryza sativa (japonica cultivar-group)] Length = 154 Score = 181 bits (458), Expect = 7e-44 Identities = 82/95 (86%), Positives = 89/95 (93%) Frame = +2 Query: 317 AAARVEDVIPIATGLEREELEAELQGKKRFDMDPPVGPFGTKEAPAVIESYYNKRIVGCP 496 A RVEDV+PIATGLEREE+ AELQGKKRFDMD PVGPFGTKEAPAVI+SYYNKRIVGCP Sbjct: 42 ARTRVEDVMPIATGLEREEIAAELQGKKRFDMDAPVGPFGTKEAPAVIQSYYNKRIVGCP 101 Query: 497 GGEGEDEHDVVWFWLKKDEPHECPVCSQYFVLKVI 601 GGEGEDEHDVVWFWL+K +PHECPVC+QYF L+VI Sbjct: 102 GGEGEDEHDVVWFWLEKGKPHECPVCTQYFSLEVI 136 >gb|ABK95853.1| unknown [Populus trichocarpa] Length = 168 Score = 164 bits (415), Expect = 7e-39 Identities = 76/100 (76%), Positives = 86/100 (86%) Frame = +2 Query: 302 SEDKPAAARVEDVIPIATGLEREELEAELQGKKRFDMDPPVGPFGTKEAPAVIESYYNKR 481 S D RVEDV+PIATG EREELEAEL+GKK D+D P GPFGTKE PAVI+SYY+KR Sbjct: 52 SVDGAVKKRVEDVMPIATGHEREELEAELEGKKLLDIDYPDGPFGTKEKPAVIKSYYDKR 111 Query: 482 IVGCPGGEGEDEHDVVWFWLKKDEPHECPVCSQYFVLKVI 601 IVGCPGGEGEDEHDVVWFWL+K +PHECPVC+Q FVL+V+ Sbjct: 112 IVGCPGGEGEDEHDVVWFWLEKGKPHECPVCTQNFVLEVV 151 >dbj|BAF30480.1| cytochrome c oxidase subunit Vb [Pisum sativum] Length = 155 Score = 162 bits (410), Expect = 3e-38 Identities = 68/92 (73%), Positives = 86/92 (93%) Frame = +2 Query: 326 RVEDVIPIATGLEREELEAELQGKKRFDMDPPVGPFGTKEAPAVIESYYNKRIVGCPGGE 505 +VED++PIATG EREEL+A+++G+ ++D P GPFGTKEAPAV++SYY+KRIVGCPGGE Sbjct: 49 KVEDIVPIATGHEREELQAQIEGRDILEIDHPEGPFGTKEAPAVVKSYYDKRIVGCPGGE 108 Query: 506 GEDEHDVVWFWLKKDEPHECPVCSQYFVLKVI 601 GEDEHDVVWFWL+KD+PHECPVC+QYFVL+V+ Sbjct: 109 GEDEHDVVWFWLEKDKPHECPVCAQYFVLEVV 140