BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst012n05
         (736 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001053226.1| Os04g0501000 [Oryza sativa (japonica cultiva...   192   1e-47
gb|EAY94740.1| hypothetical protein OsI_015973 [Oryza sativa (in...   192   2e-47
gb|EAY94744.1| hypothetical protein OsI_015977 [Oryza sativa (in...   191   3e-47
emb|CAC09511.2| H0711G06.17 [Oryza sativa (indica cultivar-group...   191   3e-47
pdb|2GO5|4 Chain 4, Structure Of Signal Recognition Particle Rec...   189   1e-46

>ref|NP_001053226.1| Os04g0501000 [Oryza sativa (japonica cultivar-group)]
 emb|CAE01636.3| OSJNBa0029H02.21 [Oryza sativa (japonica cultivar-group)]
 dbj|BAF15140.1| Os04g0501000 [Oryza sativa (japonica cultivar-group)]
          Length = 192

 Score =  192 bits (489), Expect = 1e-47
 Identities = 107/170 (62%), Positives = 111/170 (65%)
 Frame = +3

Query: 18  APPPPGRGKFKRLS*EXXXXXXXXXXXXGDVKSQALXXXXXXXXXXXXXXXXXXLTSVTF 197
           A PP     FKR   E            GD K+QAL                   TSVTF
Sbjct: 28  ASPP-----FKRQPCEAPMAPKAAPAKKGDAKAQALKAAKAVKSGTAKKTTKKIRTSVTF 82

Query: 198 HRPKTQKKARNPKYPRISTPGRNKLDQYQILKYPLTTESAMKKIEDNNTLVFXXXXXXXX 377
           HRPKT KK+R+PKYPR+STPGRNKLDQYQILKYPLTTESAMKKIEDNNTLVF        
Sbjct: 83  HRPKTLKKSRDPKYPRVSTPGRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDLKADK 142

Query: 378 XXXXXXXXXMYDIQAKKVNTLIRPDGKKKAYVKLTPDYDALDVANKIGII 527
                    MYDIQAKKVNTLIRPDGKKKAYVKLTPDYDALDVANKIGII
Sbjct: 143 KKIKAAVKKMYDIQAKKVNTLIRPDGKKKAYVKLTPDYDALDVANKIGII 192


>gb|EAY94740.1| hypothetical protein OsI_015973 [Oryza sativa (indica
           cultivar-group)]
          Length = 162

 Score =  192 bits (488), Expect = 2e-47
 Identities = 104/161 (64%), Positives = 108/161 (67%)
 Frame = +3

Query: 45  FKRLS*EXXXXXXXXXXXXGDVKSQALXXXXXXXXXXXXXXXXXXLTSVTFHRPKTQKKA 224
           FKR   E            GD K+QAL                   TSVTFHRPKT KK+
Sbjct: 2   FKRQPCEAPMAPKAAPAKKGDAKAQALKAAKAVKSGTAKKTTKKIRTSVTFHRPKTLKKS 61

Query: 225 RNPKYPRISTPGRNKLDQYQILKYPLTTESAMKKIEDNNTLVFXXXXXXXXXXXXXXXXX 404
           R+PKYPR+STPGRNKLDQYQILKYPLTTESAMKKIEDNNTLVF                 
Sbjct: 62  RDPKYPRVSTPGRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDLKADKKKIKAAVKK 121

Query: 405 MYDIQAKKVNTLIRPDGKKKAYVKLTPDYDALDVANKIGII 527
           MYDIQAKKVNTLIRPDGKKKAYVKLTPDYDALDVANKIGII
Sbjct: 122 MYDIQAKKVNTLIRPDGKKKAYVKLTPDYDALDVANKIGII 162


>gb|EAY94744.1| hypothetical protein OsI_015977 [Oryza sativa (indica
           cultivar-group)]
          Length = 164

 Score =  191 bits (486), Expect = 3e-47
 Identities = 100/142 (70%), Positives = 104/142 (73%)
 Frame = +3

Query: 102 GDVKSQALXXXXXXXXXXXXXXXXXXLTSVTFHRPKTQKKARNPKYPRISTPGRNKLDQY 281
           GD K+QAL                   TSVTFHRPKT KK+R+PKYPR+STPGRNKLDQY
Sbjct: 23  GDAKAQALKAAKAVKSGTAKKTTKKIRTSVTFHRPKTLKKSRDPKYPRVSTPGRNKLDQY 82

Query: 282 QILKYPLTTESAMKKIEDNNTLVFXXXXXXXXXXXXXXXXXMYDIQAKKVNTLIRPDGKK 461
           QILKYPLTTESAMKKIEDNNTLVF                 MYDIQAKKVNTLIRPDGKK
Sbjct: 83  QILKYPLTTESAMKKIEDNNTLVFIVDLKADKKKIKAAVKKMYDIQAKKVNTLIRPDGKK 142

Query: 462 KAYVKLTPDYDALDVANKIGII 527
           KAYVKLTPDYDALDVANKIGII
Sbjct: 143 KAYVKLTPDYDALDVANKIGII 164


>emb|CAC09511.2| H0711G06.17 [Oryza sativa (indica cultivar-group)]
 emb|CAH67548.1| H0311C03.2 [Oryza sativa (indica cultivar-group)]
          Length = 152

 Score =  191 bits (486), Expect = 3e-47
 Identities = 100/142 (70%), Positives = 104/142 (73%)
 Frame = +3

Query: 102 GDVKSQALXXXXXXXXXXXXXXXXXXLTSVTFHRPKTQKKARNPKYPRISTPGRNKLDQY 281
           GD K+QAL                   TSVTFHRPKT KK+R+PKYPR+STPGRNKLDQY
Sbjct: 11  GDAKAQALKAAKAVKSGTAKKTTKKIRTSVTFHRPKTLKKSRDPKYPRVSTPGRNKLDQY 70

Query: 282 QILKYPLTTESAMKKIEDNNTLVFXXXXXXXXXXXXXXXXXMYDIQAKKVNTLIRPDGKK 461
           QILKYPLTTESAMKKIEDNNTLVF                 MYDIQAKKVNTLIRPDGKK
Sbjct: 71  QILKYPLTTESAMKKIEDNNTLVFIVDLKADKKKIKAAVKKMYDIQAKKVNTLIRPDGKK 130

Query: 462 KAYVKLTPDYDALDVANKIGII 527
           KAYVKLTPDYDALDVANKIGII
Sbjct: 131 KAYVKLTPDYDALDVANKIGII 152


>pdb|2GO5|4 Chain 4, Structure Of Signal Recognition Particle Receptor (Sr) In
           Complex With Signal Recognition Particle (Srp) And
           Ribosome Nascent Chain Complex
 pdb|2J37|4 Chain 4, Model Of Mammalian Srp Bound To 80s Rncs
          Length = 152

 Score =  189 bits (480), Expect = 1e-46
 Identities = 100/142 (70%), Positives = 102/142 (71%)
 Frame = +3

Query: 102 GDVKSQALXXXXXXXXXXXXXXXXXXLTSVTFHRPKTQKKARNPKYPRISTPGRNKLDQY 281
           GD K+QA                    TSVTFHRPKT  KAR+PKYPRISTPGRNKLDQY
Sbjct: 11  GDAKAQAAKVAKAVKSGSIKKTAKKIRTSVTFHRPKTLSKARDPKYPRISTPGRNKLDQY 70

Query: 282 QILKYPLTTESAMKKIEDNNTLVFXXXXXXXXXXXXXXXXXMYDIQAKKVNTLIRPDGKK 461
           QILKYPLTTESAMKKIEDNNTLVF                 MYDIQAKKVNTLIRPDGKK
Sbjct: 71  QILKYPLTTESAMKKIEDNNTLVFIVDLKADKKKIKAAVKKMYDIQAKKVNTLIRPDGKK 130

Query: 462 KAYVKLTPDYDALDVANKIGII 527
           KAYVKLTPDYDALDVANKIGII
Sbjct: 131 KAYVKLTPDYDALDVANKIGII 152