BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst009k19
         (827 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001047695.1| Os02g0670400 [Oryza sativa (japonica cultiva...   142   3e-32
dbj|BAB85204.1| high mobility group box protein 2 [Oryza sativa ...   142   3e-32
emb|CAA69605.1| HMGc1 [Zea mays] >gi|5441504|emb|CAB46753.1| HMG...   141   6e-32
gb|EAZ24139.1| hypothetical protein OsJ_007622 [Oryza sativa (ja...   140   7e-32
ref|NP_001105075.1| HMG-like nucleosome/chromatin assembly facto...   139   2e-31

>ref|NP_001047695.1| Os02g0670400 [Oryza sativa (japonica cultivar-group)]
 dbj|BAD28320.1| putative high mobility group protein [Oryza sativa (japonica
           cultivar-group)]
 dbj|BAD28154.1| putative high mobility group protein [Oryza sativa (japonica
           cultivar-group)]
 dbj|BAF09609.1| Os02g0670400 [Oryza sativa (japonica cultivar-group)]
          Length = 145

 Score =  142 bits (358), Expect = 3e-32
 Identities = 74/118 (62%), Positives = 81/118 (68%)
 Frame = +1

Query: 88  MKGKADTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFVFMSEFRQEYQAQHPNNKS 267
           MKGKAD S                               FFVFMSEFRQEYQA HP+NKS
Sbjct: 1   MKGKADASKKGEGRLKAAGGAGKRKKAAASGKPKRPPSAFFVFMSEFRQEYQAAHPDNKS 60

Query: 268 VAAVSKAAGEKWRSMSEEEKAPYVDQAGQKKQDYENSKATFNKNESTSSKKAKTEDEG 441
           VAAVSKAAGEKWR+MSE+EKAPYVD+AGQKKQDYE +KA F+K ESTSSKKAKT D+G
Sbjct: 61  VAAVSKAAGEKWRAMSEQEKAPYVDKAGQKKQDYEKTKANFDKKESTSSKKAKTHDDG 118


>dbj|BAB85204.1| high mobility group box protein 2 [Oryza sativa (japonica
           cultivar-group)]
 gb|EAY87020.1| hypothetical protein OsI_008253 [Oryza sativa (indica
           cultivar-group)]
          Length = 145

 Score =  142 bits (357), Expect = 3e-32
 Identities = 74/118 (62%), Positives = 80/118 (67%)
 Frame = +1

Query: 88  MKGKADTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFVFMSEFRQEYQAQHPNNKS 267
           MKGKAD S                               FFVFMSEFRQEYQA HP NKS
Sbjct: 1   MKGKADASKKGEGRLKAAGGAGKRKKAAASGKPKRPPSAFFVFMSEFRQEYQAAHPGNKS 60

Query: 268 VAAVSKAAGEKWRSMSEEEKAPYVDQAGQKKQDYENSKATFNKNESTSSKKAKTEDEG 441
           VAAVSKAAGEKWR+MSE+EKAPYVD+AGQKKQDYE +KA F+K ESTSSKKAKT D+G
Sbjct: 61  VAAVSKAAGEKWRAMSEQEKAPYVDKAGQKKQDYEKTKANFDKKESTSSKKAKTHDDG 118


>emb|CAA69605.1| HMGc1 [Zea mays]
 emb|CAB46753.1| HMGc1 protein [Zea mays]
          Length = 139

 Score =  141 bits (355), Expect = 6e-32
 Identities = 74/117 (63%), Positives = 79/117 (67%)
 Frame = +1

Query: 88  MKGKADTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFVFMSEFRQEYQAQHPNNKS 267
           MKGKADTS                               FFVFMSEFRQEYQA HP NKS
Sbjct: 1   MKGKADTSKKDEGRLRAGGAAGKRKKAAASGKPKRPPSAFFVFMSEFRQEYQALHPGNKS 60

Query: 268 VAAVSKAAGEKWRSMSEEEKAPYVDQAGQKKQDYENSKATFNKNESTSSKKAKTEDE 438
           VA VSKAAGEKWR+MS++EK PYVDQAGQKKQDYE +KA F+K ESTSSKKAKTEDE
Sbjct: 61  VATVSKAAGEKWRAMSDQEKQPYVDQAGQKKQDYEKTKANFDKKESTSSKKAKTEDE 117


>gb|EAZ24139.1| hypothetical protein OsJ_007622 [Oryza sativa (japonica
           cultivar-group)]
          Length = 170

 Score =  140 bits (354), Expect = 7e-32
 Identities = 67/79 (84%), Positives = 74/79 (93%)
 Frame = +1

Query: 205 FFVFMSEFRQEYQAQHPNNKSVAAVSKAAGEKWRSMSEEEKAPYVDQAGQKKQDYENSKA 384
           FFVFMSEFRQEYQA HP+NKSVAAVSKAAGEKWR+MSE+EKAPYVD+AGQKKQDYE +KA
Sbjct: 65  FFVFMSEFRQEYQAAHPDNKSVAAVSKAAGEKWRAMSEQEKAPYVDKAGQKKQDYEKTKA 124

Query: 385 TFNKNESTSSKKAKTEDEG 441
            F+K ESTSSKKAKT D+G
Sbjct: 125 NFDKKESTSSKKAKTHDDG 143


>ref|NP_001105075.1| HMG-like nucleosome/chromatin assembly factor D [Zea mays]
 gb|AAL33651.1|AF440222_1 HMG-like nucleosome/chromatin assembly factor D [Zea mays]
          Length = 139

 Score =  139 bits (351), Expect = 2e-31
 Identities = 73/117 (62%), Positives = 78/117 (66%)
 Frame = +1

Query: 88  MKGKADTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFVFMSEFRQEYQAQHPNNKS 267
           MKGKADTS                               FF FMSEFRQEYQA HP NKS
Sbjct: 1   MKGKADTSKKDEGRLRAGGAAGKRKKAAASGKPKRPPSAFFAFMSEFRQEYQALHPGNKS 60

Query: 268 VAAVSKAAGEKWRSMSEEEKAPYVDQAGQKKQDYENSKATFNKNESTSSKKAKTEDE 438
           VA VSKAAGEKWR+MS++EK PYVDQAGQKKQDYE +KA F+K ESTSSKKAKTEDE
Sbjct: 61  VATVSKAAGEKWRAMSDQEKQPYVDQAGQKKQDYEKTKANFDKKESTSSKKAKTEDE 117