BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst007o09
         (769 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001042974.1| Os01g0348700 [Oryza sativa (japonica cultiva...   278   3e-73
gb|EAY94740.1| hypothetical protein OsI_015973 [Oryza sativa (in...   271   2e-71
ref|NP_001053226.1| Os04g0501000 [Oryza sativa (japonica cultiva...   271   2e-71
emb|CAC09511.2| H0711G06.17 [Oryza sativa (indica cultivar-group...   270   9e-71
pdb|2GO5|4 Chain 4, Structure Of Signal Recognition Particle Rec...   268   3e-70

>ref|NP_001042974.1| Os01g0348700 [Oryza sativa (japonica cultivar-group)]
 dbj|BAB63895.1| putative 60S ribosomal protein L23A [Oryza sativa (japonica
           cultivar-group)]
 dbj|BAB93400.1| putative 60S ribosomal protein L23A [Oryza sativa (japonica
           cultivar-group)]
 dbj|BAF04888.1| Os01g0348700 [Oryza sativa (japonica cultivar-group)]
 gb|EAY73932.1| hypothetical protein OsI_001779 [Oryza sativa (indica
           cultivar-group)]
 gb|EAZ11804.1| hypothetical protein OsJ_001629 [Oryza sativa (japonica
           cultivar-group)]
          Length = 152

 Score =  278 bits (710), Expect = 3e-73
 Identities = 143/152 (94%), Positives = 146/152 (96%), Gaps = 1/152 (0%)
 Frame = +1

Query: 64  MAPKVPPKKADGKTQ-ALKVAKAVKSGTIKRKSKKIRTSVTFHRPKTLKKARDPKYPRIS 240
           MAPK   KKADGKTQ ALKVAKAVKSG+IKRKSKKIRTSVTFHRPKTLKKARDPKYPR+S
Sbjct: 1   MAPKAAVKKADGKTQQALKVAKAVKSGSIKRKSKKIRTSVTFHRPKTLKKARDPKYPRVS 60

Query: 241 TPGRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDLKADKKMIKSAVKKMYDIQAKKV 420
            PGRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDLKADKK IK+AVKKMYDIQAKKV
Sbjct: 61  APGRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDLKADKKKIKAAVKKMYDIQAKKV 120

Query: 421 NTLIRPDGKKKAYVKLTPDYDALDVANKIGII 516
           NTLIRPDGKKKAYVKLTPDYDALDVANKIGII
Sbjct: 121 NTLIRPDGKKKAYVKLTPDYDALDVANKIGII 152


>gb|EAY94740.1| hypothetical protein OsI_015973 [Oryza sativa (indica
           cultivar-group)]
          Length = 162

 Score =  271 bits (694), Expect = 2e-71
 Identities = 138/155 (89%), Positives = 144/155 (92%), Gaps = 1/155 (0%)
 Frame = +1

Query: 55  DASMAPKVPP-KKADGKTQALKVAKAVKSGTIKRKSKKIRTSVTFHRPKTLKKARDPKYP 231
           +A MAPK  P KK D K QALK AKAVKSGT K+ +KKIRTSVTFHRPKTLKK+RDPKYP
Sbjct: 8   EAPMAPKAAPAKKGDAKAQALKAAKAVKSGTAKKTTKKIRTSVTFHRPKTLKKSRDPKYP 67

Query: 232 RISTPGRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDLKADKKMIKSAVKKMYDIQA 411
           R+STPGRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDLKADKK IK+AVKKMYDIQA
Sbjct: 68  RVSTPGRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDLKADKKKIKAAVKKMYDIQA 127

Query: 412 KKVNTLIRPDGKKKAYVKLTPDYDALDVANKIGII 516
           KKVNTLIRPDGKKKAYVKLTPDYDALDVANKIGII
Sbjct: 128 KKVNTLIRPDGKKKAYVKLTPDYDALDVANKIGII 162


>ref|NP_001053226.1| Os04g0501000 [Oryza sativa (japonica cultivar-group)]
 emb|CAE01636.3| OSJNBa0029H02.21 [Oryza sativa (japonica cultivar-group)]
 dbj|BAF15140.1| Os04g0501000 [Oryza sativa (japonica cultivar-group)]
          Length = 192

 Score =  271 bits (694), Expect = 2e-71
 Identities = 138/155 (89%), Positives = 144/155 (92%), Gaps = 1/155 (0%)
 Frame = +1

Query: 55  DASMAPKVPP-KKADGKTQALKVAKAVKSGTIKRKSKKIRTSVTFHRPKTLKKARDPKYP 231
           +A MAPK  P KK D K QALK AKAVKSGT K+ +KKIRTSVTFHRPKTLKK+RDPKYP
Sbjct: 38  EAPMAPKAAPAKKGDAKAQALKAAKAVKSGTAKKTTKKIRTSVTFHRPKTLKKSRDPKYP 97

Query: 232 RISTPGRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDLKADKKMIKSAVKKMYDIQA 411
           R+STPGRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDLKADKK IK+AVKKMYDIQA
Sbjct: 98  RVSTPGRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDLKADKKKIKAAVKKMYDIQA 157

Query: 412 KKVNTLIRPDGKKKAYVKLTPDYDALDVANKIGII 516
           KKVNTLIRPDGKKKAYVKLTPDYDALDVANKIGII
Sbjct: 158 KKVNTLIRPDGKKKAYVKLTPDYDALDVANKIGII 192


>emb|CAC09511.2| H0711G06.17 [Oryza sativa (indica cultivar-group)]
 emb|CAH67548.1| H0311C03.2 [Oryza sativa (indica cultivar-group)]
          Length = 152

 Score =  270 bits (689), Expect = 9e-71
 Identities = 137/152 (90%), Positives = 142/152 (93%), Gaps = 1/152 (0%)
 Frame = +1

Query: 64  MAPKVPP-KKADGKTQALKVAKAVKSGTIKRKSKKIRTSVTFHRPKTLKKARDPKYPRIS 240
           MAPK  P KK D K QALK AKAVKSGT K+ +KKIRTSVTFHRPKTLKK+RDPKYPR+S
Sbjct: 1   MAPKAAPAKKGDAKAQALKAAKAVKSGTAKKTTKKIRTSVTFHRPKTLKKSRDPKYPRVS 60

Query: 241 TPGRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDLKADKKMIKSAVKKMYDIQAKKV 420
           TPGRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDLKADKK IK+AVKKMYDIQAKKV
Sbjct: 61  TPGRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDLKADKKKIKAAVKKMYDIQAKKV 120

Query: 421 NTLIRPDGKKKAYVKLTPDYDALDVANKIGII 516
           NTLIRPDGKKKAYVKLTPDYDALDVANKIGII
Sbjct: 121 NTLIRPDGKKKAYVKLTPDYDALDVANKIGII 152


>pdb|2GO5|4 Chain 4, Structure Of Signal Recognition Particle Receptor (Sr) In
           Complex With Signal Recognition Particle (Srp) And
           Ribosome Nascent Chain Complex
 pdb|2J37|4 Chain 4, Model Of Mammalian Srp Bound To 80s Rncs
          Length = 152

 Score =  268 bits (684), Expect = 3e-70
 Identities = 138/152 (90%), Positives = 142/152 (93%), Gaps = 1/152 (0%)
 Frame = +1

Query: 64  MAPKVP-PKKADGKTQALKVAKAVKSGTIKRKSKKIRTSVTFHRPKTLKKARDPKYPRIS 240
           MAPKV   KK D K QA KVAKAVKSG+IK+ +KKIRTSVTFHRPKTL KARDPKYPRIS
Sbjct: 1   MAPKVAVAKKGDAKAQAAKVAKAVKSGSIKKTAKKIRTSVTFHRPKTLSKARDPKYPRIS 60

Query: 241 TPGRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDLKADKKMIKSAVKKMYDIQAKKV 420
           TPGRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDLKADKK IK+AVKKMYDIQAKKV
Sbjct: 61  TPGRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDLKADKKKIKAAVKKMYDIQAKKV 120

Query: 421 NTLIRPDGKKKAYVKLTPDYDALDVANKIGII 516
           NTLIRPDGKKKAYVKLTPDYDALDVANKIGII
Sbjct: 121 NTLIRPDGKKKAYVKLTPDYDALDVANKIGII 152