BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst007i16
         (689 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001052905.1| Os04g0445800 [Oryza sativa (japonica cultiva...   215   2e-54
emb|CAD40963.2| OSJNBa0027P08.15 [Oryza sativa (japonica cultiva...   208   3e-52
emb|CAN62239.1| hypothetical protein [Vitis vinifera] >gi|157339...   191   3e-47
ref|NP_566476.1| small nuclear ribonucleoprotein, putative / snR...   189   1e-46
gb|ABK96777.1| unknown [Populus trichocarpa x Populus deltoides]      187   5e-46

>ref|NP_001052905.1| Os04g0445800 [Oryza sativa (japonica cultivar-group)]
 dbj|BAF14819.1| Os04g0445800 [Oryza sativa (japonica cultivar-group)]
          Length = 129

 Score =  215 bits (547), Expect = 2e-54
 Identities = 108/127 (85%), Positives = 111/127 (87%)
 Frame = +2

Query: 74  SWAGPEEIFLSTSLASFLDKKLIVLLRDGRKLLGSLCSFDQFANVVLQGACERVIVGELY 253
           SWAGP+EIFLSTSLA FLDKKLIVLLRDGRKLLG+LCSFDQFANVVLQGACERVIVGELY
Sbjct: 3   SWAGPDEIFLSTSLAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGELY 62

Query: 254 CDVPLGLYVIRGENVVLIGELDREKDELPAHMTCVSXXXXXXXXXXXXXXXDLKGTMRKR 433
           CDVPLGLYVIRGENVVLIGELDREKDELPAHMTCVS               DLKG+MRKR
Sbjct: 63  CDVPLGLYVIRGENVVLIGELDREKDELPAHMTCVSEAEIRKAEKAEREARDLKGSMRKR 122

Query: 434 MEFLDFD 454
           MEFLDFD
Sbjct: 123 MEFLDFD 129


>emb|CAD40963.2| OSJNBa0027P08.15 [Oryza sativa (japonica cultivar-group)]
 emb|CAH67241.1| OSIGBa0140O07.9 [Oryza sativa (indica cultivar-group)]
          Length = 136

 Score =  208 bits (529), Expect = 3e-52
 Identities = 108/134 (80%), Positives = 111/134 (82%), Gaps = 7/134 (5%)
 Frame = +2

Query: 74  SWAGPEEIFLSTSLASFLDKKLIVLLRDGRKLLGSLCSFDQFANVVLQGACERVIVGELY 253
           SWAGP+EIFLSTSLA FLDKKLIVLLRDGRKLLG+LCSFDQFANVVLQGACERVIVGELY
Sbjct: 3   SWAGPDEIFLSTSLAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGELY 62

Query: 254 CDVPLGLYVIRGENVVLIGEL-------DREKDELPAHMTCVSXXXXXXXXXXXXXXXDL 412
           CDVPLGLYVIRGENVVLIGEL       DREKDELPAHMTCVS               DL
Sbjct: 63  CDVPLGLYVIRGENVVLIGELVWFWIEQDREKDELPAHMTCVSEAEIRKAEKAEREARDL 122

Query: 413 KGTMRKRMEFLDFD 454
           KG+MRKRMEFLDFD
Sbjct: 123 KGSMRKRMEFLDFD 136


>emb|CAN62239.1| hypothetical protein [Vitis vinifera]
 emb|CAO45598.1| unnamed protein product [Vitis vinifera]
          Length = 128

 Score =  191 bits (486), Expect = 3e-47
 Identities = 97/128 (75%), Positives = 105/128 (82%)
 Frame = +2

Query: 71  MSWAGPEEIFLSTSLASFLDKKLIVLLRDGRKLLGSLCSFDQFANVVLQGACERVIVGEL 250
           MSWAGPE+I+LSTSLAS+LDKKL+VLLRD RKLLG L SFDQFAN VL+GACERVIVG+L
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDNRKLLGILRSFDQFANAVLEGACERVIVGDL 60

Query: 251 YCDVPLGLYVIRGENVVLIGELDREKDELPAHMTCVSXXXXXXXXXXXXXXXDLKGTMRK 430
           YCD+PLGLYVIRGENVVLIGELD EK+ELP HMT VS               DLKGTMRK
Sbjct: 61  YCDIPLGLYVIRGENVVLIGELDLEKEELPPHMTRVSAAEIKRAQKAEREASDLKGTMRK 120

Query: 431 RMEFLDFD 454
           RMEFLD D
Sbjct: 121 RMEFLDLD 128


>ref|NP_566476.1| small nuclear ribonucleoprotein, putative / snRNP, putative / Sm
           protein, putative [Arabidopsis thaliana]
 ref|NP_850580.1| small nuclear ribonucleoprotein, putative / snRNP, putative / Sm
           protein, putative [Arabidopsis thaliana]
 gb|AAM61336.1| Sm protein, putative [Arabidopsis thaliana]
 gb|AAO22620.1| putative Sm protein [Arabidopsis thaliana]
 gb|AAO42334.1| putative Sm protein [Arabidopsis thaliana]
          Length = 128

 Score =  189 bits (481), Expect = 1e-46
 Identities = 94/128 (73%), Positives = 106/128 (82%)
 Frame = +2

Query: 71  MSWAGPEEIFLSTSLASFLDKKLIVLLRDGRKLLGSLCSFDQFANVVLQGACERVIVGEL 250
           MSWAGPEEI+LSTSLAS+LD+KL+VLLRDGRKL+G+L SFDQFAN VL+GACERVIVGE 
Sbjct: 1   MSWAGPEEIYLSTSLASYLDRKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEQ 60

Query: 251 YCDVPLGLYVIRGENVVLIGELDREKDELPAHMTCVSXXXXXXXXXXXXXXXDLKGTMRK 430
           YCD+PLGLYVIRGENVVLIGELD E++ELP HM  VS               +L+GTMRK
Sbjct: 61  YCDIPLGLYVIRGENVVLIGELDTEREELPPHMIRVSEAEIKRAQKVEREASELRGTMRK 120

Query: 431 RMEFLDFD 454
           RMEFLDFD
Sbjct: 121 RMEFLDFD 128


>gb|ABK96777.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 128

 Score =  187 bits (475), Expect = 5e-46
 Identities = 94/128 (73%), Positives = 105/128 (82%)
 Frame = +2

Query: 71  MSWAGPEEIFLSTSLASFLDKKLIVLLRDGRKLLGSLCSFDQFANVVLQGACERVIVGEL 250
           MSWAGPE+I+LSTSLA++LDKKL+VLLRDGRKL+G L SFDQFAN VL+GACERVIVG+L
Sbjct: 1   MSWAGPEDIYLSTSLANYLDKKLLVLLRDGRKLMGLLRSFDQFANAVLEGACERVIVGDL 60

Query: 251 YCDVPLGLYVIRGENVVLIGELDREKDELPAHMTCVSXXXXXXXXXXXXXXXDLKGTMRK 430
           YCD+ LGLYVIRGENVVLIGELD E++ELP HMT VS               DLKGTMRK
Sbjct: 61  YCDIHLGLYVIRGENVVLIGELDLEREELPPHMTRVSEAEIRRAQKAEREATDLKGTMRK 120

Query: 431 RMEFLDFD 454
           RMEFLD D
Sbjct: 121 RMEFLDLD 128