BLASTX 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst007f01 (877 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 5,815,196 sequences; 2,006,227,497 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001053235.1| Os04g0502300 [Oryza sativa (japonica cultiva... 286 1e-75 ref|NP_001060007.1| Os07g0565000 [Oryza sativa (japonica cultiva... 284 6e-75 gb|EAY94752.1| hypothetical protein OsI_015985 [Oryza sativa (in... 279 1e-73 ref|NP_001060008.1| Os07g0565100 [Oryza sativa (japonica cultiva... 276 1e-72 ref|NP_001105562.1| ribosomal protein S11 [Zea mays] >gi|133867|... 275 2e-72 >ref|NP_001053235.1| Os04g0502300 [Oryza sativa (japonica cultivar-group)] dbj|BAF15149.1| Os04g0502300 [Oryza sativa (japonica cultivar-group)] emb|CAH67584.1| OSIGBa0112M24.1 [Oryza sativa (indica cultivar-group)] Length = 160 Score = 286 bits (732), Expect = 1e-75 Identities = 139/160 (86%), Positives = 142/160 (88%) Frame = +1 Query: 61 MAEQTEKAFLKQPKVFLCXXXXXXXXXXXXXXNRFWKNIGLGFKTPKEAIEGTYIDKKCP 240 MAEQTE+AFLKQPKVFLC NRFWKNIGLGFKTP+EAIEGTYIDKKCP Sbjct: 1 MAEQTERAFLKQPKVFLCPKKTTKGKKPGKGGNRFWKNIGLGFKTPREAIEGTYIDKKCP 60 Query: 241 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 420 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 120 Query: 421 GDHVIIGQCRPLSKTVRFNVLKVIPAGSTGGSGKKAFIAA 540 GDHVIIGQCRPLSKTVRFNVLKVIPAGS G+GKK F AA Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSKSGAGKKVFTAA 160 >ref|NP_001060007.1| Os07g0565000 [Oryza sativa (japonica cultivar-group)] dbj|BAC79661.1| putative 40S ribosomal protein S11 [Oryza sativa (japonica cultivar-group)] dbj|BAD30107.1| putative 40S ribosomal protein S11 [Oryza sativa (japonica cultivar-group)] dbj|BAF21921.1| Os07g0565000 [Oryza sativa (japonica cultivar-group)] Length = 161 Score = 284 bits (726), Expect = 6e-75 Identities = 141/161 (87%), Positives = 144/161 (89%), Gaps = 1/161 (0%) Frame = +1 Query: 61 MAEQTEKAFLKQPKVFLCXXXXXXXXXXXXXXNRFWKNIGLGFKTPKEAIEGTYIDKKCP 240 MAEQTEKAFLKQPKVFL NRFWK+IGLGFKTP+EAIEGTYIDKKCP Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60 Query: 241 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 420 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH+SPCFRVKE Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE 120 Query: 421 GDHVIIGQCRPLSKTVRFNVLKVIPAGSTGGS-GKKAFIAA 540 GDHVIIGQCRPLSKTVRFNVLKVIPAGSTGGS GKKAF AA Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSTGGSGGKKAFTAA 161 >gb|EAY94752.1| hypothetical protein OsI_015985 [Oryza sativa (indica cultivar-group)] gb|EAZ31257.1| hypothetical protein OsJ_014740 [Oryza sativa (japonica cultivar-group)] Length = 167 Score = 279 bits (714), Expect = 1e-73 Identities = 139/167 (83%), Positives = 142/167 (85%), Gaps = 7/167 (4%) Frame = +1 Query: 61 MAEQTEKAFLKQPKVFLCXXXXXXXXXXXXXXNRFWKNIGLGFKTPKEAIEGTYIDKKCP 240 MAEQTE+AFLKQPKVFLC NRFWKNIGLGFKTP+EAIEGTYIDKKCP Sbjct: 1 MAEQTERAFLKQPKVFLCPKKTTKGKKPGKGGNRFWKNIGLGFKTPREAIEGTYIDKKCP 60 Query: 241 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQR-------YEKRHSNIPAHIS 399 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQR YEKRHSNIPAHIS Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQVNLVAGYEKRHSNIPAHIS 120 Query: 400 PCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSTGGSGKKAFIAA 540 PCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGS G+GKK F AA Sbjct: 121 PCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSKSGAGKKVFTAA 167 >ref|NP_001060008.1| Os07g0565100 [Oryza sativa (japonica cultivar-group)] dbj|BAC22544.1| putative 40S ribosomal protein S11 [Oryza sativa (japonica cultivar-group)] emb|CAE05212.3| OSJNBa0070C17.19 [Oryza sativa (japonica cultivar-group)] dbj|BAD30108.1| putative 40S ribosomal protein S11 [Oryza sativa (japonica cultivar-group)] dbj|BAF21922.1| Os07g0565100 [Oryza sativa (japonica cultivar-group)] gb|EAY95523.1| hypothetical protein OsI_016756 [Oryza sativa (indica cultivar-group)] gb|EAZ40319.1| hypothetical protein OsJ_023802 [Oryza sativa (japonica cultivar-group)] Length = 170 Score = 276 bits (706), Expect = 1e-72 Identities = 141/170 (82%), Positives = 144/170 (84%), Gaps = 10/170 (5%) Frame = +1 Query: 61 MAEQTEKAFLKQPKVFLCXXXXXXXXXXXXXXNRFWKNIGLGFKTPKEAIEGTYIDKKCP 240 MAEQTEKAFLKQPKVFL NRFWK+IGLGFKTP+EAIEGTYIDKKCP Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60 Query: 241 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQ---------RYEKRHSNIPAH 393 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQ RYEKRHSNIPAH Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQGANLPPCRYEKRHSNIPAH 120 Query: 394 ISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSTGGS-GKKAFIAA 540 +SPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSTGGS GKKAF AA Sbjct: 121 VSPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSTGGSGGKKAFTAA 170 >ref|NP_001105562.1| ribosomal protein S11 [Zea mays] sp|P25460|RS11_MAIZE 40S ribosomal protein S11 emb|CAA39438.1| ribosomal protein S11 [Zea mays] Length = 159 Score = 275 bits (704), Expect = 2e-72 Identities = 137/160 (85%), Positives = 141/160 (88%) Frame = +1 Query: 61 MAEQTEKAFLKQPKVFLCXXXXXXXXXXXXXXNRFWKNIGLGFKTPKEAIEGTYIDKKCP 240 MAEQTEKAFLKQPKVFL NRFWK+IGLGFKTP+EAIEGTYIDKKCP Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60 Query: 241 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 420 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 120 Query: 421 GDHVIIGQCRPLSKTVRFNVLKVIPAGSTGGSGKKAFIAA 540 GDHVIIGQCRPLSKTVRFNV+KVIPAGS +GKKAF AA Sbjct: 121 GDHVIIGQCRPLSKTVRFNVVKVIPAGS-AAAGKKAFTAA 159