BLASTX 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst007c21 (772 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 5,815,196 sequences; 2,006,227,497 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001056335.1| Os05g0565000 [Oryza sativa (japonica cultiva... 364 3e-99 ref|NP_001044264.1| Os01g0752300 [Oryza sativa (japonica cultiva... 353 8e-96 ref|NP_001043805.1| Os01g0666900 [Oryza sativa (japonica cultiva... 349 1e-94 gb|ABK92614.1| unknown [Populus trichocarpa] 345 2e-93 gb|ABK94361.1| unknown [Populus trichocarpa] 344 4e-93 >ref|NP_001056335.1| Os05g0565000 [Oryza sativa (japonica cultivar-group)] gb|AAT77404.1| putative 60S ribosomal protein L18a [Oryza sativa (japonica cultivar-group)] dbj|BAF18249.1| Os05g0565000 [Oryza sativa (japonica cultivar-group)] gb|EAY99039.1| hypothetical protein OsI_020272 [Oryza sativa (indica cultivar-group)] gb|EAZ35293.1| hypothetical protein OsJ_018776 [Oryza sativa (japonica cultivar-group)] Length = 178 Score = 364 bits (935), Expect = 3e-99 Identities = 174/178 (97%), Positives = 175/178 (98%) Frame = +1 Query: 79 MVAFRFHQYQVVGRALPTPGDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 258 MVA+RFHQYQVVGRALPTPGDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM Sbjct: 1 MVAYRFHQYQVVGRALPTPGDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 60 Query: 259 LAINEIFERNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRS 438 LAINEIFERNPT IKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVR Sbjct: 61 LAINEIFERNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120 Query: 439 PCIQIIKTATVHFKLCKRDNTKQFHNSKIKFPLVYRKVRPPTRKLKTTFKASRPNLFM 612 PCIQIIKTATVHFKLCKRDNTKQFHNS IKFPLVYRKVRPPTRKLKTTFKASRPNLFM Sbjct: 121 PCIQIIKTATVHFKLCKRDNTKQFHNSNIKFPLVYRKVRPPTRKLKTTFKASRPNLFM 178 >ref|NP_001044264.1| Os01g0752300 [Oryza sativa (japonica cultivar-group)] sp|Q943F3|RL18A_ORYSJ 60S ribosomal protein L18a dbj|BAB67920.1| putative ribosomal protein L18a [Oryza sativa (japonica cultivar-group)] dbj|BAB89536.1| putative ribosomal protein L18a [Oryza sativa (japonica cultivar-group)] dbj|BAF06178.1| Os01g0752300 [Oryza sativa (japonica cultivar-group)] gb|EAY75840.1| hypothetical protein OsI_003687 [Oryza sativa (indica cultivar-group)] gb|EAZ13560.1| hypothetical protein OsJ_003385 [Oryza sativa (japonica cultivar-group)] Length = 178 Score = 353 bits (905), Expect = 8e-96 Identities = 169/178 (94%), Positives = 171/178 (96%) Frame = +1 Query: 79 MVAFRFHQYQVVGRALPTPGDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 258 M AFRFHQYQVVGR LPTP DEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+ Sbjct: 1 MGAFRFHQYQVVGRGLPTPTDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60 Query: 259 LAINEIFERNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRS 438 LAINEIFE+NPT IKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVR Sbjct: 61 LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120 Query: 439 PCIQIIKTATVHFKLCKRDNTKQFHNSKIKFPLVYRKVRPPTRKLKTTFKASRPNLFM 612 PCIQIIKTATVHFKLCKRDNTKQFH S IKFPLVYRKVRPPTRKLKTTFKASRPNLFM Sbjct: 121 PCIQIIKTATVHFKLCKRDNTKQFHKSDIKFPLVYRKVRPPTRKLKTTFKASRPNLFM 178 >ref|NP_001043805.1| Os01g0666900 [Oryza sativa (japonica cultivar-group)] dbj|BAB90499.1| ribosomal protein L18a-like [Oryza sativa (japonica cultivar-group)] dbj|BAF05719.1| Os01g0666900 [Oryza sativa (japonica cultivar-group)] gb|EAY75298.1| hypothetical protein OsI_003145 [Oryza sativa (indica cultivar-group)] Length = 195 Score = 349 bits (895), Expect = 1e-94 Identities = 174/195 (89%), Positives = 174/195 (89%), Gaps = 17/195 (8%) Frame = +1 Query: 79 MVAFRFHQYQVVGRALPTPGDEHPKIYRMKLWATNEVRAKSKF----------W------ 210 MVAFRFHQYQVVGRALPTPGDEHPKIYRMKLWATNEVRAKSKF W Sbjct: 1 MVAFRFHQYQVVGRALPTPGDEHPKIYRMKLWATNEVRAKSKFCSSYLVRFADWGACPVC 60 Query: 211 -YFLRKLKKVKKSNGQMLAINEIFERNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNG 387 YFLRKLKKVKKSNGQMLAINEIFERNPT IKNYGIWLRYQSRTGYHNMYKEYRDTTLNG Sbjct: 61 RYFLRKLKKVKKSNGQMLAINEIFERNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNG 120 Query: 388 AVEQMYTEMASRHRVRSPCIQIIKTATVHFKLCKRDNTKQFHNSKIKFPLVYRKVRPPTR 567 AVEQMYTEMASRHRVR PCIQIIKTATVHFKLCKRDNTKQFHN IKFPLVYRKVRPPTR Sbjct: 121 AVEQMYTEMASRHRVRFPCIQIIKTATVHFKLCKRDNTKQFHNGSIKFPLVYRKVRPPTR 180 Query: 568 KLKTTFKASRPNLFM 612 KLKTTFKASRPNLFM Sbjct: 181 KLKTTFKASRPNLFM 195 >gb|ABK92614.1| unknown [Populus trichocarpa] Length = 178 Score = 345 bits (885), Expect = 2e-93 Identities = 163/178 (91%), Positives = 173/178 (97%) Frame = +1 Query: 79 MVAFRFHQYQVVGRALPTPGDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 258 MV+FRFHQYQVVGRALPT DEHPKIYRMKLWATNEVR+KSKFWYFLRKLKKVKKSNGQ+ Sbjct: 1 MVSFRFHQYQVVGRALPTESDEHPKIYRMKLWATNEVRSKSKFWYFLRKLKKVKKSNGQI 60 Query: 259 LAINEIFERNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRS 438 LAINEIFE+NPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMY EMASRHRVRS Sbjct: 61 LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYNEMASRHRVRS 120 Query: 439 PCIQIIKTATVHFKLCKRDNTKQFHNSKIKFPLVYRKVRPPTRKLKTTFKASRPNLFM 612 PCIQIIKTAT+ KLCKR++TKQFHNSKIKFPLV++KVRPPTRKLKTT+KASRPNLFM Sbjct: 121 PCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLFM 178 >gb|ABK94361.1| unknown [Populus trichocarpa] Length = 178 Score = 344 bits (882), Expect = 4e-93 Identities = 163/178 (91%), Positives = 172/178 (96%) Frame = +1 Query: 79 MVAFRFHQYQVVGRALPTPGDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 258 MV+FRFHQYQVVGRALPT DEHPKIYRMKLWATNEVR+KSKFWYFLRKLKKVKKSNGQ+ Sbjct: 1 MVSFRFHQYQVVGRALPTESDEHPKIYRMKLWATNEVRSKSKFWYFLRKLKKVKKSNGQI 60 Query: 259 LAINEIFERNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRS 438 LAINEIFE+NPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMY EMASRHRVRS Sbjct: 61 LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYNEMASRHRVRS 120 Query: 439 PCIQIIKTATVHFKLCKRDNTKQFHNSKIKFPLVYRKVRPPTRKLKTTFKASRPNLFM 612 PCIQIIKTAT+ KLCKR +TKQFHNSKIKFPLV++KVRPPTRKLKTT+KASRPNLFM Sbjct: 121 PCIQIIKTATIPAKLCKRGSTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLFM 178