BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst007b13
         (1171 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001062284.1| Os08g0524000 [Oryza sativa (japonica cultiva...   432   e-119
dbj|BAD35340.1| signal recognition particle receptor beta subuni...   297   1e-78
ref|NP_196186.1| signal recognition particle binding [Arabidopsi...   297   1e-78
ref|NP_179467.1| signal recognition particle binding [Arabidopsi...   290   1e-76
dbj|BAE99974.1| putative signal recognition particle receptor be...   290   1e-76

>ref|NP_001062284.1| Os08g0524000 [Oryza sativa (japonica cultivar-group)]
 dbj|BAD08889.1| putative signal recognition particle receptor beta subunit
           (SR-beta) [Oryza sativa (japonica cultivar-group)]
 dbj|BAF24198.1| Os08g0524000 [Oryza sativa (japonica cultivar-group)]
 gb|EAZ07696.1| hypothetical protein OsI_028928 [Oryza sativa (indica
           cultivar-group)]
 gb|EAZ43389.1| hypothetical protein OsJ_026872 [Oryza sativa (japonica
           cultivar-group)]
          Length = 256

 Score =  432 bits (1111), Expect = e-119
 Identities = 219/256 (85%), Positives = 229/256 (89%)
 Frame = +1

Query: 133 MDELVRQAEAWVGQAERWIRQQPPEQXXXXXXXXXXXXXXXXXXSCLKSSKPNTIVLSGL 312
           MDE VRQAE WVGQAERWIRQQPPEQ                  SCLKSSK NTIVLSGL
Sbjct: 1   MDEWVRQAEVWVGQAERWIRQQPPEQVYVAVAVVAVTVLLLVAVSCLKSSKANTIVLSGL 60

Query: 313 SGSGKTTLFYQLRDGSSHQGTVTSMEQNNDTFVLHSELEMKGKAKPVHVVDVPGHARLKP 492
           SGSGKT LFYQLRDGS+HQGTVTSMEQNNDTFVLHSELE +GK KPVHVVDVPGHARLKP
Sbjct: 61  SGSGKTILFYQLRDGSTHQGTVTSMEQNNDTFVLHSELERRGKVKPVHVVDVPGHARLKP 120

Query: 493 KLDEVLPQAAGVIFVVDAQDFLSSMQAAAEYLYDILTKATVVKKRVPVLIFCNKTDKVTA 672
           KLDEVLPQAAG+++VVDAQDFLS+M AAAEYLYDILTKATVVKKRVPVLIFCNKTDKVTA
Sbjct: 121 KLDEVLPQAAGIVYVVDAQDFLSTMHAAAEYLYDILTKATVVKKRVPVLIFCNKTDKVTA 180

Query: 673 HSKEFIKKQLEKEINKLRESRNAISSADITDEVQLGVPGEAFNFSQCQNKVTVDEGAGLT 852
           HSKEFIKKQLEKE+NKLRESRNAISSADITDEV+LG PGEAFNFSQCQNKVTV EGAGLT
Sbjct: 181 HSKEFIKKQLEKELNKLRESRNAISSADITDEVKLGNPGEAFNFSQCQNKVTVTEGAGLT 240

Query: 853 GNVSAVEQFMREYVKA 900
           GNVSAVE+F+REYVKA
Sbjct: 241 GNVSAVEEFIREYVKA 256


>dbj|BAD35340.1| signal recognition particle receptor beta subunit-like [Oryza
           sativa (japonica cultivar-group)]
          Length = 172

 Score =  297 bits (760), Expect = 1e-78
 Identities = 150/172 (87%), Positives = 157/172 (91%)
 Frame = +1

Query: 385 MEQNNDTFVLHSELEMKGKAKPVHVVDVPGHARLKPKLDEVLPQAAGVIFVVDAQDFLSS 564
           MEQNNDTFVLHSELE K K KPVHVVDVPGHA LKPKLDEVLPQAAG++F VDAQDFLS+
Sbjct: 1   MEQNNDTFVLHSELERKSKIKPVHVVDVPGHAGLKPKLDEVLPQAAGIVFAVDAQDFLST 60

Query: 565 MQAAAEYLYDILTKATVVKKRVPVLIFCNKTDKVTAHSKEFIKKQLEKEINKLRESRNAI 744
           MQ  AEYLYDILTKATVVKKR+ VLIFCNKTDKVTAHSKEFIKKQLEKEINKLRESR  I
Sbjct: 61  MQVVAEYLYDILTKATVVKKRIHVLIFCNKTDKVTAHSKEFIKKQLEKEINKLRESRKDI 120

Query: 745 SSADITDEVQLGVPGEAFNFSQCQNKVTVDEGAGLTGNVSAVEQFMREYVKA 900
           SSAD TDEV+LG PGE F FSQCQN+VTV EGAGLTGNVSAVEQF+REYVKA
Sbjct: 121 SSADTTDEVKLGNPGETFYFSQCQNRVTVAEGAGLTGNVSAVEQFIREYVKA 172


>ref|NP_196186.1| signal recognition particle binding [Arabidopsis thaliana]
 ref|NP_974735.1| unknown protein [Arabidopsis thaliana]
 dbj|BAB09661.1| signal recognition particle receptor beta subunit-like protein
           [Arabidopsis thaliana]
 gb|AAU95413.1| At5g05670 [Arabidopsis thaliana]
 gb|AAV43791.1| At5g05670 [Arabidopsis thaliana]
          Length = 260

 Score =  297 bits (760), Expect = 1e-78
 Identities = 147/256 (57%), Positives = 190/256 (74%), Gaps = 1/256 (0%)
 Frame = +1

Query: 133 MDELVRQAEAWVGQAERWIRQQPPEQXXXXXXXXXXXXXXXXXXSCL-KSSKPNTIVLSG 309
           +++L   AE W  Q   ++++ PP Q                    L + +K NT++LSG
Sbjct: 4   LEDLKILAEQWSHQGIEYLQKIPPNQLYAAIGVLLFTTILLFLSIRLVRRTKSNTVLLSG 63

Query: 310 LSGSGKTTLFYQLRDGSSHQGTVTSMEQNNDTFVLHSELEMKGKAKPVHVVDVPGHARLK 489
           L+GSGKT LFYQLRDGSSHQGTVTSME N  TFVLHSE   KGK KPVH+VDVPGH+RL+
Sbjct: 64  LTGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSENTKKGKIKPVHLVDVPGHSRLR 123

Query: 490 PKLDEVLPQAAGVIFVVDAQDFLSSMQAAAEYLYDILTKATVVKKRVPVLIFCNKTDKVT 669
           PKL+E LPQAA ++FVVDA +FL + +AA+EYLY+ILT A VVKK++PVL+ CNKTDK+T
Sbjct: 124 PKLEEFLPQAAAIVFVVDALEFLPNCRAASEYLYEILTNANVVKKKIPVLLCCNKTDKLT 183

Query: 670 AHSKEFIKKQLEKEINKLRESRNAISSADITDEVQLGVPGEAFNFSQCQNKVTVDEGAGL 849
           AH+KEFI+KQ+EKEI KLR SR+A+S+ADI ++  +G+ GE F+F+ C NKVTV E +GL
Sbjct: 184 AHTKEFIRKQMEKEIEKLRASRSAVSTADIANDFTIGIEGEVFSFTHCSNKVTVAEASGL 243

Query: 850 TGNVSAVEQFMREYVK 897
           TG    +E F+REY+K
Sbjct: 244 TGETIQIEDFIREYIK 259


>ref|NP_179467.1| signal recognition particle binding [Arabidopsis thaliana]
 gb|AAD08946.1| putative signal recognition particle receptor beta subunit
           [Arabidopsis thaliana]
 gb|AAM62470.1| putative signal recognition particle receptor beta subunit
           [Arabidopsis thaliana]
 gb|AAX23818.1| hypothetical protein At2g18770 [Arabidopsis thaliana]
          Length = 260

 Score =  290 bits (743), Expect = 1e-76
 Identities = 146/256 (57%), Positives = 188/256 (73%), Gaps = 1/256 (0%)
 Frame = +1

Query: 133 MDELVRQAEAWVGQAERWIRQQPPEQXXXXXXXXXXXXXXXXXXSCLKSSKPNTIVLSGL 312
           +++L   AE W  Q   ++++ PP Q                     + +K NT++LSGL
Sbjct: 4   LEDLKIVAEQWSKQGLEFVQKIPPPQLYTAIGVLLLATIWLLSIRLFRRTKSNTVLLSGL 63

Query: 313 SGSGKTTLFYQLRDGSSHQGTVTSMEQNNDTFVLHSELEMK-GKAKPVHVVDVPGHARLK 489
           SGSGKT LFYQLRDGSSHQG VTSME N  TFVLH+E   K GK KPVH++DVPGH+RL 
Sbjct: 64  SGSGKTVLFYQLRDGSSHQGAVTSMEPNEGTFVLHNENNTKKGKVKPVHLIDVPGHSRLI 123

Query: 490 PKLDEVLPQAAGVIFVVDAQDFLSSMQAAAEYLYDILTKATVVKKRVPVLIFCNKTDKVT 669
            KL+E LP+AA V+FVVDA +FL +++AA+EYLYDILT A+V+K + PVL+ CNKTDKVT
Sbjct: 124 SKLEEYLPRAAAVVFVVDALEFLPNIRAASEYLYDILTNASVIKNKTPVLLCCNKTDKVT 183

Query: 670 AHSKEFIKKQLEKEINKLRESRNAISSADITDEVQLGVPGEAFNFSQCQNKVTVDEGAGL 849
           AH+KEFI+KQ+EKEI+KLR SR+AIS+ADI ++  LG+ GE F+FS C NKVTV E +GL
Sbjct: 184 AHTKEFIRKQMEKEIDKLRVSRSAISTADIANDFTLGIEGEVFSFSHCHNKVTVAEASGL 243

Query: 850 TGNVSAVEQFMREYVK 897
           TG    V++F+RE+VK
Sbjct: 244 TGETDQVQEFIREHVK 259


>dbj|BAE99974.1| putative signal recognition particle receptor beta subunit
           [Arabidopsis thaliana]
          Length = 260

 Score =  290 bits (742), Expect = 1e-76
 Identities = 145/256 (56%), Positives = 188/256 (73%), Gaps = 1/256 (0%)
 Frame = +1

Query: 133 MDELVRQAEAWVGQAERWIRQQPPEQXXXXXXXXXXXXXXXXXXSCLKSSKPNTIVLSGL 312
           +++L   AE W  Q   ++++ PP Q                     + +K NT++LSGL
Sbjct: 4   LEDLKIVAEQWSKQGLEFVQKIPPPQLYTAIGVLLLATIWLLSIRLFRRTKSNTVLLSGL 63

Query: 313 SGSGKTTLFYQLRDGSSHQGTVTSMEQNNDTFVLHSELEMK-GKAKPVHVVDVPGHARLK 489
           SGSGKT LFYQLRDGSSHQG VTSME N  TFVLH+E   K GK KP+H++DVPGH+RL 
Sbjct: 64  SGSGKTVLFYQLRDGSSHQGAVTSMEPNEGTFVLHNENNTKKGKVKPIHLIDVPGHSRLI 123

Query: 490 PKLDEVLPQAAGVIFVVDAQDFLSSMQAAAEYLYDILTKATVVKKRVPVLIFCNKTDKVT 669
            KL+E LP+AA V+FVVDA +FL +++AA+EYLYDILT A+V+K + PVL+ CNKTDKVT
Sbjct: 124 SKLEEYLPRAAAVVFVVDALEFLPNIRAASEYLYDILTNASVIKNKTPVLLCCNKTDKVT 183

Query: 670 AHSKEFIKKQLEKEINKLRESRNAISSADITDEVQLGVPGEAFNFSQCQNKVTVDEGAGL 849
           AH+KEFI+KQ+EKEI+KLR SR+AIS+ADI ++  LG+ GE F+FS C NKVTV E +GL
Sbjct: 184 AHTKEFIRKQMEKEIDKLRVSRSAISTADIANDFTLGIEGEVFSFSHCHNKVTVAEASGL 243

Query: 850 TGNVSAVEQFMREYVK 897
           TG    V++F+RE+VK
Sbjct: 244 TGETDQVQEFIREHVK 259