BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst006m22
         (905 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF96702.1| retrotransposon protein, putative, Ty1-copia subc...   266   1e-69
ref|NP_001050397.1| Os03g0424500 [Oryza sativa (japonica cultiva...   266   1e-69
gb|ABR25439.1| 40S ribosomal protein S19 [Oryza sativa (indica c...   264   7e-69
gb|AAW34237.1| putative ribosomal protein S19 [Oryza sativa (jap...   257   8e-67
gb|AAW34236.1| putative ribosomal protein S19 [Oryza sativa (jap...   254   5e-66

>gb|ABF96702.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           (japonica cultivar-group)]
          Length = 1518

 Score =  266 bits (680), Expect = 1e-69
 Identities = 125/129 (96%), Positives = 129/129 (100%)
 Frame = +3

Query: 87  TVKDINPHEFIKAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDPDWYYTRAASMARKI 266
           TVKD+NPHEF+KAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDPDWYYTRAAS+ARKI
Sbjct: 8   TVKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDPDWYYTRAASIARKI 67

Query: 267 YLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQQLQKMGIIDVDPKGGRLIT 446
           YLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGA+SRNILQQLQKMGIIDVDPKGGRLIT
Sbjct: 68  YLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGAISRNILQQLQKMGIIDVDPKGGRLIT 127

Query: 447 SQGRRDLDQ 473
           SQGRRDLDQ
Sbjct: 128 SQGRRDLDQ 136


>ref|NP_001050397.1| Os03g0424500 [Oryza sativa (japonica cultivar-group)]
 sp|P40978|RS19_ORYSJ 40S ribosomal protein S19
 gb|AAP20842.1| putative ribosomal protein S19 [Oryza sativa (japonica
           cultivar-group)]
 gb|AAP20855.1| putative ribosomal protein S19 [Oryza sativa (japonica
           cultivar-group)]
 gb|ABF96698.1| 40S ribosomal protein S19, putative, expressed [Oryza sativa
           (japonica cultivar-group)]
 dbj|BAF12311.1| Os03g0424500 [Oryza sativa (japonica cultivar-group)]
 gb|EAY90519.1| hypothetical protein OsI_011752 [Oryza sativa (indica
           cultivar-group)]
 gb|EAY90521.1| hypothetical protein OsI_011754 [Oryza sativa (indica
           cultivar-group)]
 gb|EAZ27384.1| hypothetical protein OsJ_010867 [Oryza sativa (japonica
           cultivar-group)]
 gb|EAZ27386.1| hypothetical protein OsJ_010869 [Oryza sativa (japonica
           cultivar-group)]
          Length = 146

 Score =  266 bits (680), Expect = 1e-69
 Identities = 125/129 (96%), Positives = 129/129 (100%)
 Frame = +3

Query: 87  TVKDINPHEFIKAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDPDWYYTRAASMARKI 266
           TVKD+NPHEF+KAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDPDWYYTRAAS+ARKI
Sbjct: 8   TVKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDPDWYYTRAASIARKI 67

Query: 267 YLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQQLQKMGIIDVDPKGGRLIT 446
           YLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGA+SRNILQQLQKMGIIDVDPKGGRLIT
Sbjct: 68  YLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGAISRNILQQLQKMGIIDVDPKGGRLIT 127

Query: 447 SQGRRDLDQ 473
           SQGRRDLDQ
Sbjct: 128 SQGRRDLDQ 136


>gb|ABR25439.1| 40S ribosomal protein S19 [Oryza sativa (indica cultivar-group)]
          Length = 146

 Score =  264 bits (674), Expect = 7e-69
 Identities = 124/129 (96%), Positives = 128/129 (99%)
 Frame = +3

Query: 87  TVKDINPHEFIKAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDPDWYYTRAASMARKI 266
           TVKD+NPHEF+KAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDPDWYYTRAAS+ARKI
Sbjct: 8   TVKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDPDWYYTRAASIARKI 67

Query: 267 YLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQQLQKMGIIDVDPKGGRLIT 446
           YLRQGIGV GFQKIYGGRQRNGSRPPHFCKSSGA+SRNILQQLQKMGIIDVDPKGGRLIT
Sbjct: 68  YLRQGIGVSGFQKIYGGRQRNGSRPPHFCKSSGAISRNILQQLQKMGIIDVDPKGGRLIT 127

Query: 447 SQGRRDLDQ 473
           SQGRRDLDQ
Sbjct: 128 SQGRRDLDQ 136


>gb|AAW34237.1| putative ribosomal protein S19 [Oryza sativa (japonica
           cultivar-group)]
          Length = 144

 Score =  257 bits (656), Expect = 8e-67
 Identities = 123/129 (95%), Positives = 127/129 (98%)
 Frame = +3

Query: 87  TVKDINPHEFIKAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDPDWYYTRAASMARKI 266
           TVKD+NPHEF+KAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDPDWYYTRAAS+ARKI
Sbjct: 8   TVKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDPDWYYTRAASIARKI 67

Query: 267 YLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNILQQLQKMGIIDVDPKGGRLIT 446
           YLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGA+SRNILQQLQKMGIIDVDPKG  LIT
Sbjct: 68  YLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGAISRNILQQLQKMGIIDVDPKG--LIT 125

Query: 447 SQGRRDLDQ 473
           SQGRRDLDQ
Sbjct: 126 SQGRRDLDQ 134


>gb|AAW34236.1| putative ribosomal protein S19 [Oryza sativa (japonica
           cultivar-group)]
          Length = 166

 Score =  254 bits (649), Expect = 5e-66
 Identities = 125/149 (83%), Positives = 129/149 (86%), Gaps = 20/149 (13%)
 Frame = +3

Query: 87  TVKDINPHEFIKAYSAHLKRSGK--------------------MELPEWVDIVKTARFKE 206
           TVKD+NPHEF+KAYSAHLKRSGK                    MELPEWVDIVKTARFKE
Sbjct: 8   TVKDVNPHEFVKAYSAHLKRSGKLFVASQELLLLGNLRISFYQMELPEWVDIVKTARFKE 67

Query: 207 LPPYDPDWYYTRAASMARKIYLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGAVSRNIL 386
           LPPYDPDWYYTRAAS+ARKIYLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGA+SRNIL
Sbjct: 68  LPPYDPDWYYTRAASIARKIYLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGAISRNIL 127

Query: 387 QQLQKMGIIDVDPKGGRLITSQGRRDLDQ 473
           QQLQKMGIIDVDPKGGRLITSQGRRDLDQ
Sbjct: 128 QQLQKMGIIDVDPKGGRLITSQGRRDLDQ 156