BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst006b08
         (776 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAY92307.1| hypothetical protein OsI_013540 [Oryza sativa (in...   246   1e-63
ref|NP_001051674.1| Os03g0811700 [Oryza sativa (japonica cultiva...   246   1e-63
gb|EDQ71404.1| predicted protein [Physcomitrella patens subsp. p...   209   1e-52
ref|NP_196780.1| RNA recognition motif (RRM)-containing protein ...   209   2e-52
emb|CAN62387.1| hypothetical protein [Vitis vinifera] >gi|147810...   208   3e-52

>gb|EAY92307.1| hypothetical protein OsI_013540 [Oryza sativa (indica
           cultivar-group)]
 gb|EAZ29025.1| hypothetical protein OsJ_012508 [Oryza sativa (japonica
           cultivar-group)]
          Length = 199

 Score =  246 bits (627), Expect = 1e-63
 Identities = 123/130 (94%), Positives = 126/130 (96%)
 Frame = +2

Query: 86  MSAVSLRKSNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRLGNAKDTRGTA 265
           M+AVSLRKSNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRLGNAKDTRGTA
Sbjct: 1   MAAVSLRKSNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRLGNAKDTRGTA 60

Query: 266 FVVYEDIYDAKNAVDHLSGFNVANRYLIVLYYQPTKMSKKSDFKKKEDEITRLQEKYGLG 445
           FVVYEDIYDAKNAVDHLSGFNVANRYLIVLYYQP KMSKKSD KKKE+EITRLQEKYGLG
Sbjct: 61  FVVYEDIYDAKNAVDHLSGFNVANRYLIVLYYQPAKMSKKSDVKKKEEEITRLQEKYGLG 120

Query: 446 SKTPSSSSGA 475
           SKTPSS+  A
Sbjct: 121 SKTPSSAPDA 130


>ref|NP_001051674.1| Os03g0811700 [Oryza sativa (japonica cultivar-group)]
 gb|AAP73851.1| putative RNA binding protein [Oryza sativa (japonica
           cultivar-group)]
 gb|ABF99497.1| Pre-mRNA branch site p14, putative, expressed [Oryza sativa
           (japonica cultivar-group)]
 dbj|BAF13588.1| Os03g0811700 [Oryza sativa (japonica cultivar-group)]
          Length = 130

 Score =  246 bits (627), Expect = 1e-63
 Identities = 123/130 (94%), Positives = 126/130 (96%)
 Frame = +2

Query: 86  MSAVSLRKSNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRLGNAKDTRGTA 265
           M+AVSLRKSNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRLGNAKDTRGTA
Sbjct: 1   MAAVSLRKSNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRLGNAKDTRGTA 60

Query: 266 FVVYEDIYDAKNAVDHLSGFNVANRYLIVLYYQPTKMSKKSDFKKKEDEITRLQEKYGLG 445
           FVVYEDIYDAKNAVDHLSGFNVANRYLIVLYYQP KMSKKSD KKKE+EITRLQEKYGLG
Sbjct: 61  FVVYEDIYDAKNAVDHLSGFNVANRYLIVLYYQPAKMSKKSDVKKKEEEITRLQEKYGLG 120

Query: 446 SKTPSSSSGA 475
           SKTPSS+  A
Sbjct: 121 SKTPSSAPDA 130


>gb|EDQ71404.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 122

 Score =  209 bits (533), Expect = 1e-52
 Identities = 101/119 (84%), Positives = 112/119 (94%)
 Frame = +2

Query: 86  MSAVSLRKSNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRLGNAKDTRGTA 265
           M+A+S+R+ NARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIR+G  KDTRGTA
Sbjct: 1   MAALSIRRGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGTNKDTRGTA 60

Query: 266 FVVYEDIYDAKNAVDHLSGFNVANRYLIVLYYQPTKMSKKSDFKKKEDEITRLQEKYGL 442
           FVVYEDIYDAKNAVDHLSGFNVANRYLIVLYYQ  KMSKK D +KK++E+T+LQEKYG+
Sbjct: 61  FVVYEDIYDAKNAVDHLSGFNVANRYLIVLYYQQAKMSKKVDQRKKDEELTKLQEKYGV 119


>ref|NP_196780.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
           thaliana]
 sp|Q9FMP4|PM14_ARATH Pre-mRNA branch site p14-like protein
 dbj|BAB10037.1| unnamed protein product [Arabidopsis thaliana]
 gb|AAM67034.1| unknown [Arabidopsis thaliana]
 gb|AAO22648.1| putative RRM-containing protein [Arabidopsis thaliana]
 gb|AAO42424.1| putative RRM-containing protein [Arabidopsis thaliana]
          Length = 124

 Score =  209 bits (531), Expect = 2e-52
 Identities = 103/122 (84%), Positives = 111/122 (90%)
 Frame = +2

Query: 86  MSAVSLRKSNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRLGNAKDTRGTA 265
           M+ +SLRKSN RLPPEVNRVLYVRNLPFNI+SEEMYDIFGKYGAIRQIR+G  K T+GTA
Sbjct: 1   MTTISLRKSNTRLPPEVNRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGCDKATKGTA 60

Query: 266 FVVYEDIYDAKNAVDHLSGFNVANRYLIVLYYQPTKMSKKSDFKKKEDEITRLQEKYGLG 445
           FVVYEDIYDAKNAVDHLSGFNVANRYLIVLYYQ  KMSKK D KK EDEIT+LQEKYG+ 
Sbjct: 61  FVVYEDIYDAKNAVDHLSGFNVANRYLIVLYYQHAKMSKKFDQKKSEDEITKLQEKYGVS 120

Query: 446 SK 451
           +K
Sbjct: 121 TK 122


>emb|CAN62387.1| hypothetical protein [Vitis vinifera]
 emb|CAN67767.1| hypothetical protein [Vitis vinifera]
 emb|CAO67259.1| unnamed protein product [Vitis vinifera]
          Length = 125

 Score =  208 bits (529), Expect = 3e-52
 Identities = 101/119 (84%), Positives = 108/119 (90%)
 Frame = +2

Query: 86  MSAVSLRKSNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRLGNAKDTRGTA 265
           M+ +SLRK N RLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIR+G  KDTRGTA
Sbjct: 1   MATISLRKGNTRLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGTNKDTRGTA 60

Query: 266 FVVYEDIYDAKNAVDHLSGFNVANRYLIVLYYQPTKMSKKSDFKKKEDEITRLQEKYGL 442
           FVVYEDIYDAK AVDHLSGFNVANRYLIVLYYQ  KMSKK D KKKEDE+ ++QEKYG+
Sbjct: 61  FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQAKMSKKFDQKKKEDELAKMQEKYGV 119