BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst006b01
         (829 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001053235.1| Os04g0502300 [Oryza sativa (japonica cultiva...   327   6e-88
gb|EAY94752.1| hypothetical protein OsI_015985 [Oryza sativa (in...   320   7e-86
ref|NP_001060007.1| Os07g0565000 [Oryza sativa (japonica cultiva...   304   4e-81
ref|NP_001105562.1| ribosomal protein S11 [Zea mays] >gi|133867|...   303   9e-81
sp|Q9M5M1|RS11_EUPES 40S ribosomal protein S11 >gi|6984142|gb|AA...   299   1e-79

>ref|NP_001053235.1| Os04g0502300 [Oryza sativa (japonica cultivar-group)]
 dbj|BAF15149.1| Os04g0502300 [Oryza sativa (japonica cultivar-group)]
 emb|CAH67584.1| OSIGBa0112M24.1 [Oryza sativa (indica cultivar-group)]
          Length = 160

 Score =  327 bits (838), Expect = 6e-88
 Identities = 157/160 (98%), Positives = 158/160 (98%)
 Frame = +2

Query: 89  MAEQTERAFLKQPKVFLCPKKTTKGNKPGKGGNRFWKNIGLGFKTPREAIEGTYIDKKCP 268
           MAEQTERAFLKQPKVFLCPKKTTKG KPGKGGNRFWKNIGLGFKTPREAIEGTYIDKKCP
Sbjct: 1   MAEQTERAFLKQPKVFLCPKKTTKGKKPGKGGNRFWKNIGLGFKTPREAIEGTYIDKKCP 60

Query: 269 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 448
           FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61  FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 120

Query: 449 GDYVIIGQCRPLSKTVRFNVLKVIPAGSKSGAGKKAFTAA 568
           GD+VIIGQCRPLSKTVRFNVLKVIPAGSKSGAGKK FTAA
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSKSGAGKKVFTAA 160


>gb|EAY94752.1| hypothetical protein OsI_015985 [Oryza sativa (indica
           cultivar-group)]
 gb|EAZ31257.1| hypothetical protein OsJ_014740 [Oryza sativa (japonica
           cultivar-group)]
          Length = 167

 Score =  320 bits (820), Expect = 7e-86
 Identities = 157/167 (94%), Positives = 158/167 (94%), Gaps = 7/167 (4%)
 Frame = +2

Query: 89  MAEQTERAFLKQPKVFLCPKKTTKGNKPGKGGNRFWKNIGLGFKTPREAIEGTYIDKKCP 268
           MAEQTERAFLKQPKVFLCPKKTTKG KPGKGGNRFWKNIGLGFKTPREAIEGTYIDKKCP
Sbjct: 1   MAEQTERAFLKQPKVFLCPKKTTKGKKPGKGGNRFWKNIGLGFKTPREAIEGTYIDKKCP 60

Query: 269 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQR-------YEKRHSNIPAHIS 427
           FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQR       YEKRHSNIPAHIS
Sbjct: 61  FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQVNLVAGYEKRHSNIPAHIS 120

Query: 428 PCFRVKEGDYVIIGQCRPLSKTVRFNVLKVIPAGSKSGAGKKAFTAA 568
           PCFRVKEGD+VIIGQCRPLSKTVRFNVLKVIPAGSKSGAGKK FTAA
Sbjct: 121 PCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSKSGAGKKVFTAA 167


>ref|NP_001060007.1| Os07g0565000 [Oryza sativa (japonica cultivar-group)]
 dbj|BAC79661.1| putative 40S ribosomal protein S11 [Oryza sativa (japonica
           cultivar-group)]
 dbj|BAD30107.1| putative 40S ribosomal protein S11 [Oryza sativa (japonica
           cultivar-group)]
 dbj|BAF21921.1| Os07g0565000 [Oryza sativa (japonica cultivar-group)]
          Length = 161

 Score =  304 bits (779), Expect = 4e-81
 Identities = 148/161 (91%), Positives = 154/161 (95%), Gaps = 1/161 (0%)
 Frame = +2

Query: 89  MAEQTERAFLKQPKVFLCPKKTTKGNKPGKGGNRFWKNIGLGFKTPREAIEGTYIDKKCP 268
           MAEQTE+AFLKQPKVFL  KK+ KG KPGKGGNRFWK+IGLGFKTPREAIEGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60

Query: 269 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 448
           FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH+SPCFRVKE
Sbjct: 61  FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE 120

Query: 449 GDYVIIGQCRPLSKTVRFNVLKVIPAGSKSGA-GKKAFTAA 568
           GD+VIIGQCRPLSKTVRFNVLKVIPAGS  G+ GKKAFTAA
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSTGGSGGKKAFTAA 161


>ref|NP_001105562.1| ribosomal protein S11 [Zea mays]
 sp|P25460|RS11_MAIZE 40S ribosomal protein S11
 emb|CAA39438.1| ribosomal protein S11 [Zea mays]
          Length = 159

 Score =  303 bits (776), Expect = 9e-81
 Identities = 148/160 (92%), Positives = 154/160 (96%)
 Frame = +2

Query: 89  MAEQTERAFLKQPKVFLCPKKTTKGNKPGKGGNRFWKNIGLGFKTPREAIEGTYIDKKCP 268
           MAEQTE+AFLKQPKVFL  KK+ KG KPGKGGNRFWK+IGLGFKTPREAIEGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60

Query: 269 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 448
           FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61  FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 120

Query: 449 GDYVIIGQCRPLSKTVRFNVLKVIPAGSKSGAGKKAFTAA 568
           GD+VIIGQCRPLSKTVRFNV+KVIPAGS + AGKKAFTAA
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVVKVIPAGS-AAAGKKAFTAA 159


>sp|Q9M5M1|RS11_EUPES 40S ribosomal protein S11
 gb|AAF34771.1|AF227626_1 40S ribosomal protein S11 [Euphorbia esula]
          Length = 159

 Score =  299 bits (766), Expect = 1e-79
 Identities = 144/159 (90%), Positives = 152/159 (95%)
 Frame = +2

Query: 89  MAEQTERAFLKQPKVFLCPKKTTKGNKPGKGGNRFWKNIGLGFKTPREAIEGTYIDKKCP 268
           MAEQTE+AFLKQPKVFL  KKT KG +PGKGGNRFWK+IGLGFKTPREAI+GTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLASKKTGKGKRPGKGGNRFWKSIGLGFKTPREAIDGTYIDKKCP 60

Query: 269 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 448
           FTGTVSIRGRI+AGTCHSAKMNRTIIVRRNYLHF+KKYQRYEKRHSNIPAH+SPCFRVKE
Sbjct: 61  FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHVSPCFRVKE 120

Query: 449 GDYVIIGQCRPLSKTVRFNVLKVIPAGSKSGAGKKAFTA 565
           GD+VIIGQCRPLSKTVRFNVLKVIPAGS SG  KKAFTA
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGS-SGGVKKAFTA 158