BLASTX 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst005o24 (672 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 5,815,196 sequences; 2,006,227,497 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001053235.1| Os04g0502300 [Oryza sativa (japonica cultiva... 262 1e-68 gb|EAY94752.1| hypothetical protein OsI_015985 [Oryza sativa (in... 255 1e-66 ref|NP_001060007.1| Os07g0565000 [Oryza sativa (japonica cultiva... 254 3e-66 ref|NP_001105562.1| ribosomal protein S11 [Zea mays] >gi|133867|... 253 5e-66 sp|Q9M5M1|RS11_EUPES 40S ribosomal protein S11 >gi|6984142|gb|AA... 252 1e-65 >ref|NP_001053235.1| Os04g0502300 [Oryza sativa (japonica cultivar-group)] dbj|BAF15149.1| Os04g0502300 [Oryza sativa (japonica cultivar-group)] emb|CAH67584.1| OSIGBa0112M24.1 [Oryza sativa (indica cultivar-group)] Length = 160 Score = 262 bits (670), Expect = 1e-68 Identities = 130/158 (82%), Positives = 131/158 (82%) Frame = +3 Query: 66 EQTEKAFLKQPKVFLCXXXXXXXXXXXXXXNRFWKNIGLGFKTPREAIEGTYIDKKCPFT 245 EQTE+AFLKQPKVFLC NRFWKNIGLGFKTPREAIEGTYIDKKCPFT Sbjct: 3 EQTERAFLKQPKVFLCPKKTTKGKKPGKGGNRFWKNIGLGFKTPREAIEGTYIDKKCPFT 62 Query: 246 GTVSIRGRIIAGTCLSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGD 425 GTVSIRGRIIAGTC SAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGD Sbjct: 63 GTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGD 122 Query: 426 HAIIGQCRPLSKTVRFNVLKVIPXXXXXXXXXXXFTAA 539 H IIGQCRPLSKTVRFNVLKVIP FTAA Sbjct: 123 HVIIGQCRPLSKTVRFNVLKVIPAGSKSGAGKKVFTAA 160 >gb|EAY94752.1| hypothetical protein OsI_015985 [Oryza sativa (indica cultivar-group)] gb|EAZ31257.1| hypothetical protein OsJ_014740 [Oryza sativa (japonica cultivar-group)] Length = 167 Score = 255 bits (652), Expect = 1e-66 Identities = 130/165 (78%), Positives = 131/165 (79%), Gaps = 7/165 (4%) Frame = +3 Query: 66 EQTEKAFLKQPKVFLCXXXXXXXXXXXXXXNRFWKNIGLGFKTPREAIEGTYIDKKCPFT 245 EQTE+AFLKQPKVFLC NRFWKNIGLGFKTPREAIEGTYIDKKCPFT Sbjct: 3 EQTERAFLKQPKVFLCPKKTTKGKKPGKGGNRFWKNIGLGFKTPREAIEGTYIDKKCPFT 62 Query: 246 GTVSIRGRIIAGTCLSAKMNRTIIVRRNYLHFVKKYQR-------YEKRHSNIPAHISPC 404 GTVSIRGRIIAGTC SAKMNRTIIVRRNYLHFVKKYQR YEKRHSNIPAHISPC Sbjct: 63 GTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQVNLVAGYEKRHSNIPAHISPC 122 Query: 405 FRVKEGDHAIIGQCRPLSKTVRFNVLKVIPXXXXXXXXXXXFTAA 539 FRVKEGDH IIGQCRPLSKTVRFNVLKVIP FTAA Sbjct: 123 FRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSKSGAGKKVFTAA 167 >ref|NP_001060007.1| Os07g0565000 [Oryza sativa (japonica cultivar-group)] dbj|BAC79661.1| putative 40S ribosomal protein S11 [Oryza sativa (japonica cultivar-group)] dbj|BAD30107.1| putative 40S ribosomal protein S11 [Oryza sativa (japonica cultivar-group)] dbj|BAF21921.1| Os07g0565000 [Oryza sativa (japonica cultivar-group)] Length = 161 Score = 254 bits (649), Expect = 3e-66 Identities = 124/143 (86%), Positives = 126/143 (88%) Frame = +3 Query: 66 EQTEKAFLKQPKVFLCXXXXXXXXXXXXXXNRFWKNIGLGFKTPREAIEGTYIDKKCPFT 245 EQTEKAFLKQPKVFL NRFWK+IGLGFKTPREAIEGTYIDKKCPFT Sbjct: 3 EQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFT 62 Query: 246 GTVSIRGRIIAGTCLSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGD 425 GTVSIRGRIIAGTC SAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH+SPCFRVKEGD Sbjct: 63 GTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFRVKEGD 122 Query: 426 HAIIGQCRPLSKTVRFNVLKVIP 494 H IIGQCRPLSKTVRFNVLKVIP Sbjct: 123 HVIIGQCRPLSKTVRFNVLKVIP 145 >ref|NP_001105562.1| ribosomal protein S11 [Zea mays] sp|P25460|RS11_MAIZE 40S ribosomal protein S11 emb|CAA39438.1| ribosomal protein S11 [Zea mays] Length = 159 Score = 253 bits (647), Expect = 5e-66 Identities = 124/143 (86%), Positives = 126/143 (88%) Frame = +3 Query: 66 EQTEKAFLKQPKVFLCXXXXXXXXXXXXXXNRFWKNIGLGFKTPREAIEGTYIDKKCPFT 245 EQTEKAFLKQPKVFL NRFWK+IGLGFKTPREAIEGTYIDKKCPFT Sbjct: 3 EQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFT 62 Query: 246 GTVSIRGRIIAGTCLSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGD 425 GTVSIRGRIIAGTC SAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGD Sbjct: 63 GTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGD 122 Query: 426 HAIIGQCRPLSKTVRFNVLKVIP 494 H IIGQCRPLSKTVRFNV+KVIP Sbjct: 123 HVIIGQCRPLSKTVRFNVVKVIP 145 >sp|Q9M5M1|RS11_EUPES 40S ribosomal protein S11 gb|AAF34771.1|AF227626_1 40S ribosomal protein S11 [Euphorbia esula] Length = 159 Score = 252 bits (644), Expect = 1e-65 Identities = 121/143 (84%), Positives = 126/143 (88%) Frame = +3 Query: 66 EQTEKAFLKQPKVFLCXXXXXXXXXXXXXXNRFWKNIGLGFKTPREAIEGTYIDKKCPFT 245 EQTEKAFLKQPKVFL NRFWK+IGLGFKTPREAI+GTYIDKKCPFT Sbjct: 3 EQTEKAFLKQPKVFLASKKTGKGKRPGKGGNRFWKSIGLGFKTPREAIDGTYIDKKCPFT 62 Query: 246 GTVSIRGRIIAGTCLSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGD 425 GTVSIRGRI+AGTC SAKMNRTIIVRRNYLHF+KKYQRYEKRHSNIPAH+SPCFRVKEGD Sbjct: 63 GTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHVSPCFRVKEGD 122 Query: 426 HAIIGQCRPLSKTVRFNVLKVIP 494 H IIGQCRPLSKTVRFNVLKVIP Sbjct: 123 HVIIGQCRPLSKTVRFNVLKVIP 145