BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst005d10
         (1509 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001058818.1| Os07g0129700 [Oryza sativa (japonica cultiva...   439   e-121
ref|NP_001105331.1| rough sheath1 [Zea mays] >gi|3024577|sp|Q418...   438   e-121
gb|EAZ38573.1| hypothetical protein OsJ_022056 [Oryza sativa (ja...   436   e-120
gb|AAC32818.1| KNOX class homeodomain protein [Oryza sativa]          436   e-120
dbj|BAA77817.1| HOS3 [Oryza sativa (japonica cultivar-group)]         436   e-120

>ref|NP_001058818.1| Os07g0129700 [Oryza sativa (japonica cultivar-group)]
 dbj|BAA31688.1| OSH15 [Oryza sativa (japonica cultivar-group)]
 dbj|BAC84729.1| homeobox gene [Oryza sativa (japonica cultivar-group)]
 dbj|BAF20732.1| Os07g0129700 [Oryza sativa (japonica cultivar-group)]
          Length = 355

 Score =  439 bits (1130), Expect = e-121
 Identities = 236/358 (65%), Positives = 244/358 (68%), Gaps = 20/358 (5%)
 Frame = +2

Query: 197  MDQSFGNLXXXXXXXXXXXXXXXXFLQLPLSXXXXXXXXXXXXXXXXXXXXXHHAAGPSQ 376
            MDQSFGNL                FLQLPLS                       AAGPSQ
Sbjct: 1    MDQSFGNLGGGGGAGGSGKAAASSFLQLPLSTAAAATAYYGTPLALHQAAA---AAGPSQ 57

Query: 377  YY---------------HKHXXXXXXXXXXXXXXXXXXMAHPQYSALLAAYLDCQKVGAP 511
            Y+               H                    MAHPQYSALLAAYLDCQKVGAP
Sbjct: 58   YHGHGHPHHGGGHHHSKHGGAGGGEISAAEAESIKAKIMAHPQYSALLAAYLDCQKVGAP 117

Query: 512  PDVLERLTAMAAKLDARPRGRHEPRDPELDQFMEAYCNMLVKYREELTRPIEEAMEFLRR 691
            P+VLERLTA AAKLDARP GRH+ RDPELDQFMEAYCNML KYREELTRPI+EAMEFL+R
Sbjct: 118  PEVLERLTATAAKLDARPPGRHDARDPELDQFMEAYCNMLAKYREELTRPIDEAMEFLKR 177

Query: 692  VEAQLDSI-----NGGGSSARLLLADGKSEGVGSSEDDLDPSGRENEPPEIDPRAEDKEX 856
            VE+QLD+I      GG  SARLLLADGKSE VGSSEDD+DPSGRENEPPEIDPRAEDKE 
Sbjct: 178  VESQLDTIAGGAHGGGAGSARLLLADGKSECVGSSEDDMDPSGRENEPPEIDPRAEDKEL 237

Query: 857  XXXXXXXXXXXXXXXRQEFSXXXXXXXXXXEARQKLLHWWELHYKWPYPSETEKIALAES 1036
                           RQEFS          EARQKLLHWWELHYKWPYPSETEKIALAES
Sbjct: 238  KFQLLKKYSGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPSETEKIALAES 297

Query: 1037 TGLDQKQINNWFINQRKRHWKPSEDMPFVMMEGFHPQNAAALYMDGQFMADGMYRLGS 1210
            TGLDQKQINNWFINQRKRHWKPSEDMPFVMMEGFHPQNAAALYMDG FMADGMYRLGS
Sbjct: 298  TGLDQKQINNWFINQRKRHWKPSEDMPFVMMEGFHPQNAAALYMDGPFMADGMYRLGS 355


>ref|NP_001105331.1| rough sheath1 [Zea mays]
 sp|Q41853|RSH1_MAIZE Homeobox protein rough sheath 1
 gb|AAA86287.1| RS1 gene product
          Length = 351

 Score =  438 bits (1126), Expect = e-121
 Identities = 238/357 (66%), Positives = 246/357 (68%), Gaps = 19/357 (5%)
 Frame = +2

Query: 197  MDQSFGNLXXXXXXXXXXXXXXXX--------FLQLPLSXXXXXXXXXXXXXXXXXXXXX 352
            MDQSFGNL                        FLQLPLS                     
Sbjct: 1    MDQSFGNLGAGAGSSSGGSNSKAAATAVSSSSFLQLPLSTASPAYYGAPLALLH------ 54

Query: 353  HHAAGPS-------QYYHKHXXXXXXXXXXXXXXXXXX--MAHPQYSALLAAYLDCQKVG 505
            H AA PS       Q +H H                    +AHPQYSALLAAYLDCQKVG
Sbjct: 55   HAAAAPSSSQQHQQQQHHHHYARHGAEMSAAEAEAIKAKIVAHPQYSALLAAYLDCQKVG 114

Query: 506  APPDVLERLTAMAAKLDARPRGRHEPRDPELDQFMEAYCNMLVKYREELTRPIEEAMEFL 685
            APPDVLERLTAMAAKLDA   GRHEPRDPELDQFMEAYCNMLVKYREELTRPI+EAMEFL
Sbjct: 115  APPDVLERLTAMAAKLDASAAGRHEPRDPELDQFMEAYCNMLVKYREELTRPIDEAMEFL 174

Query: 686  RRVEAQLDSINGGG--SSARLLLADGKSEGVGSSEDDLDPSGRENEPPEIDPRAEDKEXX 859
            +RVEAQLD I+GGG  SSARL LADGKSEGVGSSEDD+DP+GREN+PPEIDPRAEDKE  
Sbjct: 175  KRVEAQLDCISGGGGSSSARLSLADGKSEGVGSSEDDMDPNGRENDPPEIDPRAEDKELK 234

Query: 860  XXXXXXXXXXXXXXRQEFSXXXXXXXXXXEARQKLLHWWELHYKWPYPSETEKIALAEST 1039
                          RQEFS          EARQKLLHWWELHYKWPYPSETEKIALAEST
Sbjct: 235  YQLLKKYSGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPSETEKIALAEST 294

Query: 1040 GLDQKQINNWFINQRKRHWKPSEDMPFVMMEGFHPQNAAALYMDGQFMADGMYRLGS 1210
            GLDQKQINNWFINQRKRHWKPSEDMPFVMMEGFHPQNAAALYMDG FM DGMYRLGS
Sbjct: 295  GLDQKQINNWFINQRKRHWKPSEDMPFVMMEGFHPQNAAALYMDGPFMRDGMYRLGS 351


>gb|EAZ38573.1| hypothetical protein OsJ_022056 [Oryza sativa (japonica
            cultivar-group)]
          Length = 405

 Score =  436 bits (1120), Expect = e-120
 Identities = 234/356 (65%), Positives = 242/356 (67%), Gaps = 20/356 (5%)
 Frame = +2

Query: 197  MDQSFGNLXXXXXXXXXXXXXXXXFLQLPLSXXXXXXXXXXXXXXXXXXXXXHHAAGPSQ 376
            MDQSFGNL                FLQLPLS                       AAGPSQ
Sbjct: 1    MDQSFGNLGGGGGAGGSGKAAASSFLQLPLSTAAAATAYYGTPLALHQAAA---AAGPSQ 57

Query: 377  YY---------------HKHXXXXXXXXXXXXXXXXXXMAHPQYSALLAAYLDCQKVGAP 511
            Y+               H                    MAHPQYSALLAAYLDCQKVGAP
Sbjct: 58   YHGHGHPHHGGGHHHSKHGGAGGGEISAAEAESIKAKIMAHPQYSALLAAYLDCQKVGAP 117

Query: 512  PDVLERLTAMAAKLDARPRGRHEPRDPELDQFMEAYCNMLVKYREELTRPIEEAMEFLRR 691
            P+VLERLTA AAKLDARP GRH+ RDPELDQFMEAYCNML KYREELTRPI+EAMEFL+R
Sbjct: 118  PEVLERLTATAAKLDARPPGRHDARDPELDQFMEAYCNMLAKYREELTRPIDEAMEFLKR 177

Query: 692  VEAQLDSI-----NGGGSSARLLLADGKSEGVGSSEDDLDPSGRENEPPEIDPRAEDKEX 856
            VE+QLD+I      GG  SARLLLADGKSE VGSSEDD+DPSGRENEPPEIDPRAEDKE 
Sbjct: 178  VESQLDTIAGGAHGGGAGSARLLLADGKSECVGSSEDDMDPSGRENEPPEIDPRAEDKEL 237

Query: 857  XXXXXXXXXXXXXXXRQEFSXXXXXXXXXXEARQKLLHWWELHYKWPYPSETEKIALAES 1036
                           RQEFS          EARQKLLHWWELHYKWPYPSETEKIALAES
Sbjct: 238  KFQLLKKYSGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPSETEKIALAES 297

Query: 1037 TGLDQKQINNWFINQRKRHWKPSEDMPFVMMEGFHPQNAAALYMDGQFMADGMYRL 1204
            TGLDQKQINNWFINQRKRHWKPSEDMPFVMMEGFHPQNAAALYMDG FMADGMYRL
Sbjct: 298  TGLDQKQINNWFINQRKRHWKPSEDMPFVMMEGFHPQNAAALYMDGPFMADGMYRL 353


>gb|AAC32818.1| KNOX class homeodomain protein [Oryza sativa]
          Length = 357

 Score =  436 bits (1120), Expect = e-120
 Identities = 237/361 (65%), Positives = 245/361 (67%), Gaps = 23/361 (6%)
 Frame = +2

Query: 197  MDQSFGNLXXXXXXXXXXXXXXXXFLQLPLSXXXXXXXXXXXXXXXXXXXXXHHAAGPSQ 376
            MDQSFGNL                FLQLPLS                       AAGPSQ
Sbjct: 1    MDQSFGNLGGGGAGGSGKAAASS-FLQLPLSTAAAATAYYGTPLALHQAAA---AAGPSQ 56

Query: 377  YY---------------HKHXXXXXXXXXXXXXXXXXXMAHPQYSALLAAYLDCQKVGAP 511
            Y+               H                    MAHPQYSALLAAYLDCQKVGAP
Sbjct: 57   YHGHGHPHHGGGHHHSKHGGAGGGEISAAEAESIKAKIMAHPQYSALLAAYLDCQKVGAP 116

Query: 512  PDVLERLTAMAAKLDARPRGRHEPRDPELDQFMEAYCNMLVKYREELTRPIEEAMEFLRR 691
            P+VLERLTA AAKLDARP GRH+ RDPELDQFMEAYCNML KYREELTRPI+EAMEFL+R
Sbjct: 117  PEVLERLTATAAKLDARPPGRHDARDPELDQFMEAYCNMLAKYREELTRPIDEAMEFLKR 176

Query: 692  VEAQLDSINGGG--------SSARLLLADGKSEGVGSSEDDLDPSGRENEPPEIDPRAED 847
            VE+QLD+I GGG         SARLLLADGKSE VGSSEDD+DPSGRENEPPEIDPRAED
Sbjct: 177  VESQLDTIAGGGHGGSGGGAGSARLLLADGKSECVGSSEDDMDPSGRENEPPEIDPRAED 236

Query: 848  KEXXXXXXXXXXXXXXXXRQEFSXXXXXXXXXXEARQKLLHWWELHYKWPYPSETEKIAL 1027
            KE                RQEFS          EARQKLLHWWELHYKWPYPSETEKIAL
Sbjct: 237  KELKFQLLKKYSGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPSETEKIAL 296

Query: 1028 AESTGLDQKQINNWFINQRKRHWKPSEDMPFVMMEGFHPQNAAALYMDGQFMADGMYRLG 1207
            AESTGLDQKQINNWFINQRKRHWKPSEDMPFVMMEGFHPQNAAALYMDG FMADGMYRLG
Sbjct: 297  AESTGLDQKQINNWFINQRKRHWKPSEDMPFVMMEGFHPQNAAALYMDGPFMADGMYRLG 356

Query: 1208 S 1210
            S
Sbjct: 357  S 357


>dbj|BAA77817.1| HOS3 [Oryza sativa (japonica cultivar-group)]
          Length = 355

 Score =  436 bits (1120), Expect = e-120
 Identities = 235/358 (65%), Positives = 243/358 (67%), Gaps = 20/358 (5%)
 Frame = +2

Query: 197  MDQSFGNLXXXXXXXXXXXXXXXXFLQLPLSXXXXXXXXXXXXXXXXXXXXXHHAAGPSQ 376
            MDQSFGNL                FLQLPLS                       AAGPSQ
Sbjct: 1    MDQSFGNLGGGGGAGGSGKAAASSFLQLPLSTAAAATAYYGTPLALHQAAA---AAGPSQ 57

Query: 377  YY---------------HKHXXXXXXXXXXXXXXXXXXMAHPQYSALLAAYLDCQKVGAP 511
            Y+               H                    MAHPQYSALLAAYLDCQKVGAP
Sbjct: 58   YHGHGHPHHGGGHHHSKHGGAGGGEISAAEAESIKAKIMAHPQYSALLAAYLDCQKVGAP 117

Query: 512  PDVLERLTAMAAKLDARPRGRHEPRDPELDQFMEAYCNMLVKYREELTRPIEEAMEFLRR 691
            P+VLERLTA AAKLDARP GRH+ RDPELDQFMEAYCNML KYREELTRPI+EAMEFL+R
Sbjct: 118  PEVLERLTATAAKLDARPPGRHDARDPELDQFMEAYCNMLAKYREELTRPIDEAMEFLKR 177

Query: 692  VEAQLDSI-----NGGGSSARLLLADGKSEGVGSSEDDLDPSGRENEPPEIDPRAEDKEX 856
            VE+QLD+I      GG  SARLLLADGKSE VGSSEDD+DPSGRENEPPEIDPRAEDKE 
Sbjct: 178  VESQLDTIAGGAHGGGAGSARLLLADGKSECVGSSEDDMDPSGRENEPPEIDPRAEDKEL 237

Query: 857  XXXXXXXXXXXXXXXRQEFSXXXXXXXXXXEARQKLLHWWELHYKWPYPSETEKIALAES 1036
                           RQEFS          EARQKLLHWWELHYKWPYPSETEKIALAES
Sbjct: 238  KFQLLKKYSGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPSETEKIALAES 297

Query: 1037 TGLDQKQINNWFINQRKRHWKPSEDMPFVMMEGFHPQNAAALYMDGQFMADGMYRLGS 1210
            TGLDQKQINNWFINQRKRHWKPSEDMPFVMMEGF PQNAAALYMDG FMADGMYRLGS
Sbjct: 298  TGLDQKQINNWFINQRKRHWKPSEDMPFVMMEGFPPQNAAALYMDGPFMADGMYRLGS 355