BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst004g03
         (696 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAZ00722.1| hypothetical protein OsI_021954 [Oryza sativa (in...   234   3e-60
ref|NP_001057508.1| Os06g0319700 [Oryza sativa (japonica cultiva...   231   3e-59
ref|NP_001105280.1| hypothetical protein LOC542196 [Zea mays] >g...   231   4e-59
pdb|2GO5|6 Chain 6, Structure Of Signal Recognition Particle Rec...   220   7e-56
dbj|BAD08833.1| putative 60S ribosomal protein L31 [Oryza sativa...   219   1e-55

>gb|EAZ00722.1| hypothetical protein OsI_021954 [Oryza sativa (indica
           cultivar-group)]
          Length = 124

 Score =  234 bits (597), Expect = 3e-60
 Identities = 116/121 (95%), Positives = 119/121 (98%)
 Frame = +3

Query: 84  MAEKKQRAGGARKDEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRV 263
           MAEKKQR GGARKDEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGT DVRV
Sbjct: 1   MAEKKQRPGGARKDEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTIDVRV 60

Query: 264 DVKLNKHIWSSGIRSVPRRVRVKIARKRNDEEDAKEELYSLVTVAEIPPEGLKGLGTKLV 443
           DVKLNKHIWSSGIRSVPRRVRV+IAR+RNDEEDAKEELYSLVTVAE+PPEGLKGLGTKLV
Sbjct: 61  DVKLNKHIWSSGIRSVPRRVRVRIARRRNDEEDAKEELYSLVTVAEVPPEGLKGLGTKLV 120

Query: 444 E 446
           E
Sbjct: 121 E 121


>ref|NP_001057508.1| Os06g0319700 [Oryza sativa (japonica cultivar-group)]
 dbj|BAD61612.1| putative 60S ribosomal protein L31 [Oryza sativa (japonica
           cultivar-group)]
 dbj|BAF19422.1| Os06g0319700 [Oryza sativa (japonica cultivar-group)]
 gb|EAZ36810.1| hypothetical protein OsJ_020293 [Oryza sativa (japonica
           cultivar-group)]
          Length = 124

 Score =  231 bits (589), Expect = 3e-59
 Identities = 115/121 (95%), Positives = 118/121 (97%)
 Frame = +3

Query: 84  MAEKKQRAGGARKDEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRV 263
           MAEKKQR GGARKDEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGT DVRV
Sbjct: 1   MAEKKQRPGGARKDEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTIDVRV 60

Query: 264 DVKLNKHIWSSGIRSVPRRVRVKIARKRNDEEDAKEELYSLVTVAEIPPEGLKGLGTKLV 443
           DVKLNKHIWSSGIRSVPRRVRV+IAR+RNDEEDAKEELYSLVTVAE+P EGLKGLGTKLV
Sbjct: 61  DVKLNKHIWSSGIRSVPRRVRVRIARRRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKLV 120

Query: 444 E 446
           E
Sbjct: 121 E 121


>ref|NP_001105280.1| hypothetical protein LOC542196 [Zea mays]
 gb|AAV28627.1| putative 60S ribosomal protein L31 [Zea mays]
          Length = 124

 Score =  231 bits (588), Expect = 4e-59
 Identities = 113/121 (93%), Positives = 119/121 (98%)
 Frame = +3

Query: 84  MAEKKQRAGGARKDEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRV 263
           MAEKKQR GG+RKDEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTD+R+
Sbjct: 1   MAEKKQRPGGSRKDEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDIRI 60

Query: 264 DVKLNKHIWSSGIRSVPRRVRVKIARKRNDEEDAKEELYSLVTVAEIPPEGLKGLGTKLV 443
           DVKLNKHIWSSGIRSVPRRVRV+IARKRNDEEDAKEELYSLVTVAEIP EGLKGLGTK+V
Sbjct: 61  DVKLNKHIWSSGIRSVPRRVRVRIARKRNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVV 120

Query: 444 E 446
           +
Sbjct: 121 D 121


>pdb|2GO5|6 Chain 6, Structure Of Signal Recognition Particle Receptor (Sr) In
           Complex With Signal Recognition Particle (Srp) And
           Ribosome Nascent Chain Complex
 pdb|2J37|6 Chain 6, Model Of Mammalian Srp Bound To 80s Rncs
          Length = 123

 Score =  220 bits (560), Expect = 7e-56
 Identities = 110/121 (90%), Positives = 116/121 (95%)
 Frame = +3

Query: 84  MAEKKQRAGGARKDEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRV 263
           M+EKK RA G RKDEVVTREYT+NLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGT DVR+
Sbjct: 1   MSEKK-RAPGPRKDEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRI 59

Query: 264 DVKLNKHIWSSGIRSVPRRVRVKIARKRNDEEDAKEELYSLVTVAEIPPEGLKGLGTKLV 443
           DVKLNKHIWSSGIRSVPRRVRV+IARKRNDEEDAKEELYSLVTVAE+P EGLKGLGTK+V
Sbjct: 60  DVKLNKHIWSSGIRSVPRRVRVRIARKRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVV 119

Query: 444 E 446
           E
Sbjct: 120 E 120


>dbj|BAD08833.1| putative 60S ribosomal protein L31 [Oryza sativa (japonica
           cultivar-group)]
 dbj|BAD10170.1| putative 60S ribosomal protein L31 [Oryza sativa (japonica
           cultivar-group)]
 gb|EAZ07547.1| hypothetical protein OsI_028779 [Oryza sativa (indica
           cultivar-group)]
 gb|EAZ43268.1| hypothetical protein OsJ_026751 [Oryza sativa (japonica
           cultivar-group)]
          Length = 122

 Score =  219 bits (558), Expect = 1e-55
 Identities = 110/121 (90%), Positives = 115/121 (95%)
 Frame = +3

Query: 84  MAEKKQRAGGARKDEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRV 263
           M EKK   G ARK+EVVTREYTINLHKRLH CTFKKKAPNAIKEIRKFAQKAMGTTDVRV
Sbjct: 1   MVEKK--GGAARKEEVVTREYTINLHKRLHSCTFKKKAPNAIKEIRKFAQKAMGTTDVRV 58

Query: 264 DVKLNKHIWSSGIRSVPRRVRVKIARKRNDEEDAKEELYSLVTVAEIPPEGLKGLGTKLV 443
           DVKLNKHIWSSGIRSVPRRVRV+IARKRNDEEDAKEELYSLVTVAE+PPEGLKGLGTK+V
Sbjct: 59  DVKLNKHIWSSGIRSVPRRVRVRIARKRNDEEDAKEELYSLVTVAEVPPEGLKGLGTKVV 118

Query: 444 E 446
           +
Sbjct: 119 D 119