BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst003l12
         (1260 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001062284.1| Os08g0524000 [Oryza sativa (japonica cultiva...   438   e-121
ref|NP_196186.1| signal recognition particle binding [Arabidopsi...   308   5e-82
dbj|BAD35340.1| signal recognition particle receptor beta subuni...   302   4e-80
ref|NP_179467.1| signal recognition particle binding [Arabidopsi...   301   5e-80
dbj|BAE99974.1| putative signal recognition particle receptor be...   301   6e-80

>ref|NP_001062284.1| Os08g0524000 [Oryza sativa (japonica cultivar-group)]
 dbj|BAD08889.1| putative signal recognition particle receptor beta subunit
           (SR-beta) [Oryza sativa (japonica cultivar-group)]
 dbj|BAF24198.1| Os08g0524000 [Oryza sativa (japonica cultivar-group)]
 gb|EAZ07696.1| hypothetical protein OsI_028928 [Oryza sativa (indica
           cultivar-group)]
 gb|EAZ43389.1| hypothetical protein OsJ_026872 [Oryza sativa (japonica
           cultivar-group)]
          Length = 256

 Score =  438 bits (1126), Expect = e-121
 Identities = 220/256 (85%), Positives = 231/256 (90%)
 Frame = +1

Query: 169 MDDLVRQAEAWVGQAERWIRQQPPEQIYXXXXXXXXXXXXXXXXSCLKSSKPNTIVLSGL 348
           MD+ VRQAE WVGQAERWIRQQPPEQ+Y                SCLKSSK NTIVLSGL
Sbjct: 1   MDEWVRQAEVWVGQAERWIRQQPPEQVYVAVAVVAVTVLLLVAVSCLKSSKANTIVLSGL 60

Query: 349 SGSGKTILFYQLRDGSSHQGTVTSMEQNNDTFVLHSELERKGKAKPVHVVDVPGHARLKP 528
           SGSGKTILFYQLRDGS+HQGTVTSMEQNNDTFVLHSELER+GK KPVHVVDVPGHARLKP
Sbjct: 61  SGSGKTILFYQLRDGSTHQGTVTSMEQNNDTFVLHSELERRGKVKPVHVVDVPGHARLKP 120

Query: 529 KLDEVLPQAAGVVFVVDAQDFLSSMQAAAEYLYDILTKATIVKKRVPVLIFCNKTDKVTA 708
           KLDEVLPQAAG+V+VVDAQDFLS+M AAAEYLYDILTKAT+VKKRVPVLIFCNKTDKVTA
Sbjct: 121 KLDEVLPQAAGIVYVVDAQDFLSTMHAAAEYLYDILTKATVVKKRVPVLIFCNKTDKVTA 180

Query: 709 HSKEFIKKQLEKEINKLRESRNAISSADITDEVQLGVPGEVFNFSQCQNNVTVAEGAGLT 888
           HSKEFIKKQLEKE+NKLRESRNAISSADITDEV+LG PGE FNFSQCQN VTV EGAGLT
Sbjct: 181 HSKEFIKKQLEKELNKLRESRNAISSADITDEVKLGNPGEAFNFSQCQNKVTVTEGAGLT 240

Query: 889 GNVSAVEQFIREYVKA 936
           GNVSAVE+FIREYVKA
Sbjct: 241 GNVSAVEEFIREYVKA 256


>ref|NP_196186.1| signal recognition particle binding [Arabidopsis thaliana]
 ref|NP_974735.1| unknown protein [Arabidopsis thaliana]
 dbj|BAB09661.1| signal recognition particle receptor beta subunit-like protein
           [Arabidopsis thaliana]
 gb|AAU95413.1| At5g05670 [Arabidopsis thaliana]
 gb|AAV43791.1| At5g05670 [Arabidopsis thaliana]
          Length = 260

 Score =  308 bits (789), Expect = 5e-82
 Identities = 151/256 (58%), Positives = 195/256 (76%), Gaps = 1/256 (0%)
 Frame = +1

Query: 169 MDDLVRQAEAWVGQAERWIRQQPPEQIYXXXXXXXXXXXXXXXXSCL-KSSKPNTIVLSG 345
           ++DL   AE W  Q   ++++ PP Q+Y                  L + +K NT++LSG
Sbjct: 4   LEDLKILAEQWSHQGIEYLQKIPPNQLYAAIGVLLFTTILLFLSIRLVRRTKSNTVLLSG 63

Query: 346 LSGSGKTILFYQLRDGSSHQGTVTSMEQNNDTFVLHSELERKGKAKPVHVVDVPGHARLK 525
           L+GSGKT+LFYQLRDGSSHQGTVTSME N  TFVLHSE  +KGK KPVH+VDVPGH+RL+
Sbjct: 64  LTGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSENTKKGKIKPVHLVDVPGHSRLR 123

Query: 526 PKLDEVLPQAAGVVFVVDAQDFLSSMQAAAEYLYDILTKATIVKKRVPVLIFCNKTDKVT 705
           PKL+E LPQAA +VFVVDA +FL + +AA+EYLY+ILT A +VKK++PVL+ CNKTDK+T
Sbjct: 124 PKLEEFLPQAAAIVFVVDALEFLPNCRAASEYLYEILTNANVVKKKIPVLLCCNKTDKLT 183

Query: 706 AHSKEFIKKQLEKEINKLRESRNAISSADITDEVQLGVPGEVFNFSQCQNNVTVAEGAGL 885
           AH+KEFI+KQ+EKEI KLR SR+A+S+ADI ++  +G+ GEVF+F+ C N VTVAE +GL
Sbjct: 184 AHTKEFIRKQMEKEIEKLRASRSAVSTADIANDFTIGIEGEVFSFTHCSNKVTVAEASGL 243

Query: 886 TGNVSAVEQFIREYVK 933
           TG    +E FIREY+K
Sbjct: 244 TGETIQIEDFIREYIK 259


>dbj|BAD35340.1| signal recognition particle receptor beta subunit-like [Oryza
           sativa (japonica cultivar-group)]
          Length = 172

 Score =  302 bits (773), Expect = 4e-80
 Identities = 153/172 (88%), Positives = 158/172 (91%)
 Frame = +1

Query: 421 MEQNNDTFVLHSELERKGKAKPVHVVDVPGHARLKPKLDEVLPQAAGVVFVVDAQDFLSS 600
           MEQNNDTFVLHSELERK K KPVHVVDVPGHA LKPKLDEVLPQAAG+VF VDAQDFLS+
Sbjct: 1   MEQNNDTFVLHSELERKSKIKPVHVVDVPGHAGLKPKLDEVLPQAAGIVFAVDAQDFLST 60

Query: 601 MQAAAEYLYDILTKATIVKKRVPVLIFCNKTDKVTAHSKEFIKKQLEKEINKLRESRNAI 780
           MQ  AEYLYDILTKAT+VKKR+ VLIFCNKTDKVTAHSKEFIKKQLEKEINKLRESR  I
Sbjct: 61  MQVVAEYLYDILTKATVVKKRIHVLIFCNKTDKVTAHSKEFIKKQLEKEINKLRESRKDI 120

Query: 781 SSADITDEVQLGVPGEVFNFSQCQNNVTVAEGAGLTGNVSAVEQFIREYVKA 936
           SSAD TDEV+LG PGE F FSQCQN VTVAEGAGLTGNVSAVEQFIREYVKA
Sbjct: 121 SSADTTDEVKLGNPGETFYFSQCQNRVTVAEGAGLTGNVSAVEQFIREYVKA 172


>ref|NP_179467.1| signal recognition particle binding [Arabidopsis thaliana]
 gb|AAD08946.1| putative signal recognition particle receptor beta subunit
           [Arabidopsis thaliana]
 gb|AAM62470.1| putative signal recognition particle receptor beta subunit
           [Arabidopsis thaliana]
 gb|AAX23818.1| hypothetical protein At2g18770 [Arabidopsis thaliana]
          Length = 260

 Score =  301 bits (772), Expect = 5e-80
 Identities = 150/256 (58%), Positives = 193/256 (75%), Gaps = 1/256 (0%)
 Frame = +1

Query: 169 MDDLVRQAEAWVGQAERWIRQQPPEQIYXXXXXXXXXXXXXXXXSCLKSSKPNTIVLSGL 348
           ++DL   AE W  Q   ++++ PP Q+Y                   + +K NT++LSGL
Sbjct: 4   LEDLKIVAEQWSKQGLEFVQKIPPPQLYTAIGVLLLATIWLLSIRLFRRTKSNTVLLSGL 63

Query: 349 SGSGKTILFYQLRDGSSHQGTVTSMEQNNDTFVLHSELE-RKGKAKPVHVVDVPGHARLK 525
           SGSGKT+LFYQLRDGSSHQG VTSME N  TFVLH+E   +KGK KPVH++DVPGH+RL 
Sbjct: 64  SGSGKTVLFYQLRDGSSHQGAVTSMEPNEGTFVLHNENNTKKGKVKPVHLIDVPGHSRLI 123

Query: 526 PKLDEVLPQAAGVVFVVDAQDFLSSMQAAAEYLYDILTKATIVKKRVPVLIFCNKTDKVT 705
            KL+E LP+AA VVFVVDA +FL +++AA+EYLYDILT A+++K + PVL+ CNKTDKVT
Sbjct: 124 SKLEEYLPRAAAVVFVVDALEFLPNIRAASEYLYDILTNASVIKNKTPVLLCCNKTDKVT 183

Query: 706 AHSKEFIKKQLEKEINKLRESRNAISSADITDEVQLGVPGEVFNFSQCQNNVTVAEGAGL 885
           AH+KEFI+KQ+EKEI+KLR SR+AIS+ADI ++  LG+ GEVF+FS C N VTVAE +GL
Sbjct: 184 AHTKEFIRKQMEKEIDKLRVSRSAISTADIANDFTLGIEGEVFSFSHCHNKVTVAEASGL 243

Query: 886 TGNVSAVEQFIREYVK 933
           TG    V++FIRE+VK
Sbjct: 244 TGETDQVQEFIREHVK 259


>dbj|BAE99974.1| putative signal recognition particle receptor beta subunit
           [Arabidopsis thaliana]
          Length = 260

 Score =  301 bits (771), Expect = 6e-80
 Identities = 149/256 (58%), Positives = 193/256 (75%), Gaps = 1/256 (0%)
 Frame = +1

Query: 169 MDDLVRQAEAWVGQAERWIRQQPPEQIYXXXXXXXXXXXXXXXXSCLKSSKPNTIVLSGL 348
           ++DL   AE W  Q   ++++ PP Q+Y                   + +K NT++LSGL
Sbjct: 4   LEDLKIVAEQWSKQGLEFVQKIPPPQLYTAIGVLLLATIWLLSIRLFRRTKSNTVLLSGL 63

Query: 349 SGSGKTILFYQLRDGSSHQGTVTSMEQNNDTFVLHSELE-RKGKAKPVHVVDVPGHARLK 525
           SGSGKT+LFYQLRDGSSHQG VTSME N  TFVLH+E   +KGK KP+H++DVPGH+RL 
Sbjct: 64  SGSGKTVLFYQLRDGSSHQGAVTSMEPNEGTFVLHNENNTKKGKVKPIHLIDVPGHSRLI 123

Query: 526 PKLDEVLPQAAGVVFVVDAQDFLSSMQAAAEYLYDILTKATIVKKRVPVLIFCNKTDKVT 705
            KL+E LP+AA VVFVVDA +FL +++AA+EYLYDILT A+++K + PVL+ CNKTDKVT
Sbjct: 124 SKLEEYLPRAAAVVFVVDALEFLPNIRAASEYLYDILTNASVIKNKTPVLLCCNKTDKVT 183

Query: 706 AHSKEFIKKQLEKEINKLRESRNAISSADITDEVQLGVPGEVFNFSQCQNNVTVAEGAGL 885
           AH+KEFI+KQ+EKEI+KLR SR+AIS+ADI ++  LG+ GEVF+FS C N VTVAE +GL
Sbjct: 184 AHTKEFIRKQMEKEIDKLRVSRSAISTADIANDFTLGIEGEVFSFSHCHNKVTVAEASGL 243

Query: 886 TGNVSAVEQFIREYVK 933
           TG    V++FIRE+VK
Sbjct: 244 TGETDQVQEFIREHVK 259