BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst003k16
         (768 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAY87568.1| hypothetical protein OsI_008801 [Oryza sativa (in...   242   2e-62
ref|NP_001048153.1| Os02g0754300 [Oryza sativa (japonica cultiva...   240   6e-62
ref|NP_001104944.1| ribosomal protein L29 [Zea mays] >gi|4639705...   232   2e-59
ref|NP_201325.1| ribosomal protein L29 family protein [Arabidops...   159   1e-37
gb|ABK22942.1| unknown [Picea sitchensis] >gi|116786089|gb|ABK23...   153   1e-35

>gb|EAY87568.1| hypothetical protein OsI_008801 [Oryza sativa (indica
           cultivar-group)]
          Length = 165

 Score =  242 bits (617), Expect = 2e-62
 Identities = 129/165 (78%), Positives = 140/165 (84%), Gaps = 4/165 (2%)
 Frame = +2

Query: 53  MATMSLAAASPLTSTPRGLAVSTPRTAFVGIRVGGSSVARFXXXXXXXXXXXXXXXX--- 223
           MATMSLAAASPL STPRGLAVSTPRTAF+G+R GG+S+A F                   
Sbjct: 1   MATMSLAAASPLASTPRGLAVSTPRTAFLGLRTGGASLAPFPGLAAAAAPPRLPAGRGDA 60

Query: 224 -LVRMAKREQELEEMRSMTTEQLEEEVVDLKGELFLLRLKRSARQEFKSSEFGRMRKRIA 400
            + RMAKREQELEE+R+M TE++EEEVVDLKGELF+LRLKRSARQEFKSSEFGRMRKRIA
Sbjct: 61  AVARMAKREQELEEIRAMPTEKIEEEVVDLKGELFMLRLKRSARQEFKSSEFGRMRKRIA 120

Query: 401 RMLTVKREREIEQGINKRLSRKLDRKWKQSIVVRPPPSLRENKEE 535
           RMLTVKREREIEQGINKRLSRKLDRKWKQSI+VRPPPSLRENKEE
Sbjct: 121 RMLTVKREREIEQGINKRLSRKLDRKWKQSIMVRPPPSLRENKEE 165


>ref|NP_001048153.1| Os02g0754300 [Oryza sativa (japonica cultivar-group)]
 dbj|BAD17237.1| putative ribosomal protein L29 [Oryza sativa (japonica
           cultivar-group)]
 dbj|BAF10067.1| Os02g0754300 [Oryza sativa (japonica cultivar-group)]
          Length = 165

 Score =  240 bits (613), Expect = 6e-62
 Identities = 129/165 (78%), Positives = 139/165 (84%), Gaps = 4/165 (2%)
 Frame = +2

Query: 53  MATMSLAAASPLTSTPRGLAVSTPRTAFVGIRVGGSSVARFXXXXXXXXXXXXXXXX--- 223
           MATMSLAAASPL STPRGLAVSTPRTAF+G+  GG+S+A F                   
Sbjct: 1   MATMSLAAASPLASTPRGLAVSTPRTAFLGLLTGGASLAPFPGLAAAAAPPRLPAGRGDA 60

Query: 224 -LVRMAKREQELEEMRSMTTEQLEEEVVDLKGELFLLRLKRSARQEFKSSEFGRMRKRIA 400
            + RMAKREQELEE+R+M TE++EEEVVDLKGELF+LRLKRSARQEFKSSEFGRMRKRIA
Sbjct: 61  AVARMAKREQELEEIRAMPTEKIEEEVVDLKGELFMLRLKRSARQEFKSSEFGRMRKRIA 120

Query: 401 RMLTVKREREIEQGINKRLSRKLDRKWKQSIVVRPPPSLRENKEE 535
           RMLTVKREREIEQGINKRLSRKLDRKWKQSIVVRPPPSLRENKEE
Sbjct: 121 RMLTVKREREIEQGINKRLSRKLDRKWKQSIVVRPPPSLRENKEE 165


>ref|NP_001104944.1| ribosomal protein L29 [Zea mays]
 sp|Q9SWI6|RK29_MAIZE 50S ribosomal protein L29, chloroplast precursor (CL29)
 gb|AAD50383.1|AF147725_1 ribosomal protein L29 [Zea mays]
          Length = 161

 Score =  232 bits (592), Expect = 2e-59
 Identities = 122/161 (75%), Positives = 132/161 (81%)
 Frame = +2

Query: 53  MATMSLAAASPLTSTPRGLAVSTPRTAFVGIRVGGSSVARFXXXXXXXXXXXXXXXXLVR 232
           MATMSLAAASPL S PRG+A   P  AF+ IR+GG++  RF                +V 
Sbjct: 1   MATMSLAAASPLASIPRGIAAQAPCAAFLSIRLGGATATRFAGLAVASQPAERRAAAMVA 60

Query: 233 MAKREQELEEMRSMTTEQLEEEVVDLKGELFLLRLKRSARQEFKSSEFGRMRKRIARMLT 412
           MAKREQELEE+R+MTTEQ+EEEVVDLKGELFLLRLKRSARQEFK+SEF RMRKRIARMLT
Sbjct: 61  MAKREQELEEIRAMTTEQMEEEVVDLKGELFLLRLKRSARQEFKNSEFSRMRKRIARMLT 120

Query: 413 VKREREIEQGINKRLSRKLDRKWKQSIVVRPPPSLRENKEE 535
           VKREREIEQGINKRLSRKLDRKWKQSIVVRPPPSLR NKEE
Sbjct: 121 VKREREIEQGINKRLSRKLDRKWKQSIVVRPPPSLRGNKEE 161


>ref|NP_201325.1| ribosomal protein L29 family protein [Arabidopsis thaliana]
 sp|Q9FJP3|RK29_ARATH 50S ribosomal protein L29, chloroplast precursor (CL29)
 dbj|BAB11658.1| 50S ribosomal protein L29 [Arabidopsis thaliana]
 gb|AAK76640.1| putative 50S ribosomal protein L29 [Arabidopsis thaliana]
 gb|AAL85082.1| putative 50S ribosomal protein L29 [Arabidopsis thaliana]
 gb|AAM62883.1| 50S ribosomal protein L29 [Arabidopsis thaliana]
          Length = 173

 Score =  159 bits (403), Expect = 1e-37
 Identities = 91/161 (56%), Positives = 119/161 (73%), Gaps = 3/161 (1%)
 Frame = +2

Query: 62  MSLAAASPLTST--PRGLAVSTPRTA-FVGIRVGGSSVARFXXXXXXXXXXXXXXXXLVR 232
           +SL+ A+P T+    RG A +T  ++ F G+R+     AR                 +V 
Sbjct: 2   LSLSIATPGTAAIFRRGTASATSTSSSFHGVRIQHQVSARVPAAATISSSSPKPS--VVM 59

Query: 233 MAKREQELEEMRSMTTEQLEEEVVDLKGELFLLRLKRSARQEFKSSEFGRMRKRIARMLT 412
           M+KRE EL+E+RS TTEQL+EEVVDLKGELF+LRL++SAR EFKSS+F RM+K++ARMLT
Sbjct: 60  MSKREAELKEIRSKTTEQLQEEVVDLKGELFMLRLQKSARNEFKSSDFRRMKKQVARMLT 119

Query: 413 VKREREIEQGINKRLSRKLDRKWKQSIVVRPPPSLRENKEE 535
           VKREREI++GI KRLSRKLDR+WK+SIV RPPPSL++ +EE
Sbjct: 120 VKREREIKEGIKKRLSRKLDRQWKKSIVPRPPPSLKKLQEE 160


>gb|ABK22942.1| unknown [Picea sitchensis]
 gb|ABK23969.1| unknown [Picea sitchensis]
          Length = 173

 Score =  153 bits (386), Expect = 1e-35
 Identities = 76/108 (70%), Positives = 95/108 (87%)
 Frame = +2

Query: 227 VRMAKREQELEEMRSMTTEQLEEEVVDLKGELFLLRLKRSARQEFKSSEFGRMRKRIARM 406
           V MAKRE+EL+E+R+  TE++ +EV+DLKGEL +LR+K++ RQE KSSEFGRMRK+IARM
Sbjct: 58  VMMAKREEELKEIRTKITEEINDEVIDLKGELVMLRIKKATRQELKSSEFGRMRKKIARM 117

Query: 407 LTVKREREIEQGINKRLSRKLDRKWKQSIVVRPPPSLRENKEE*KAAK 550
           LTV+REREIEQGI KRLSRK+DR WK+SI+ RPPPSL + +EE KAAK
Sbjct: 118 LTVRREREIEQGIKKRLSRKMDRAWKRSIIARPPPSLLKLQEE-KAAK 164