BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst003e21
         (855 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001066606.1| Os12g0291400 [Oryza sativa (japonica cultiva...   329   1e-88
ref|NP_001066607.1| Os12g0292400 [Oryza sativa (japonica cultiva...   327   8e-88
ref|NP_001066604.1| Os12g0291100 [Oryza sativa (japonica cultiva...   325   2e-87
gb|EAY82834.1| hypothetical protein OsI_036793 [Oryza sativa (in...   324   4e-87
ref|NP_001066559.1| Os12g0274700 [Oryza sativa (japonica cultiva...   322   2e-86

>ref|NP_001066606.1| Os12g0291400 [Oryza sativa (japonica cultivar-group)]
 gb|ABA97173.1| Ribulose bisphosphate carboxylase small chain A, chloroplast
           precursor, putative, expressed [Oryza sativa (japonica
           cultivar-group)]
 gb|ABG21973.1| Ribulose bisphosphate carboxylase small chain A, chloroplast
           precursor, putative, expressed [Oryza sativa (japonica
           cultivar-group)]
 dbj|BAF29625.1| Os12g0291400 [Oryza sativa (japonica cultivar-group)]
 gb|EAZ20214.1| hypothetical protein OsJ_034423 [Oryza sativa (japonica
           cultivar-group)]
          Length = 175

 Score =  329 bits (844), Expect = 1e-88
 Identities = 156/174 (89%), Positives = 166/174 (95%)
 Frame = +3

Query: 60  MAPSVMASSATSVAPFQGLKSTAGLPVSRRSSSAGLGSVSNGGRIRCMQVWPIVGIKKFE 239
           MAP+VMASSATSVAPFQGLKSTAGLPVSRRS+SAGLGSVSNGGRI CMQVWPI GIKKFE
Sbjct: 1   MAPTVMASSATSVAPFQGLKSTAGLPVSRRSNSAGLGSVSNGGRISCMQVWPIEGIKKFE 60

Query: 240 TLSYLPPLSQEDLLKQIEYLIRNNWIPCLEFSKVGFVYRENNRSPGYYDGRYWTMWKLPM 419
           TLSYLPPL+ EDLLKQIEYL+R+ W+PCLEFSKVGFVYREN+RSPGYYDGRYWTMWKLPM
Sbjct: 61  TLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYYDGRYWTMWKLPM 120

Query: 420 FGCTDASQVLKEVSEVNKEYPDAFVRIIGFDNVRQVQLISFIAYKPPGCQESGG 581
           FGCTDA+QVLKE+ E  K YPDAFVRIIGFDNVRQVQLISFIAYKPPGC+ESGG
Sbjct: 121 FGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPGCEESGG 174


>ref|NP_001066607.1| Os12g0292400 [Oryza sativa (japonica cultivar-group)]
 gb|ABA97179.1| Ribulose bisphosphate carboxylase small chain C, chloroplast
           precursor, putative, expressed [Oryza sativa (japonica
           cultivar-group)]
 gb|ABA97180.1| Ribulose bisphosphate carboxylase small chain C, chloroplast
           precursor, putative, expressed [Oryza sativa (japonica
           cultivar-group)]
 dbj|BAF29626.1| Os12g0292400 [Oryza sativa (japonica cultivar-group)]
 gb|EAZ20216.1| hypothetical protein OsJ_034425 [Oryza sativa (japonica
           cultivar-group)]
 gb|ABR25478.1| ribulose bisphosphate carboxylase small chain c [Oryza sativa
           (indica cultivar-group)]
          Length = 175

 Score =  327 bits (837), Expect = 8e-88
 Identities = 154/174 (88%), Positives = 165/174 (94%)
 Frame = +3

Query: 60  MAPSVMASSATSVAPFQGLKSTAGLPVSRRSSSAGLGSVSNGGRIRCMQVWPIVGIKKFE 239
           MAPSVMASSATSVAPFQGLKSTAGLPV+RRSSS+  G+VSNGGRIRCMQVWPI GIKKFE
Sbjct: 1   MAPSVMASSATSVAPFQGLKSTAGLPVNRRSSSSSFGNVSNGGRIRCMQVWPIEGIKKFE 60

Query: 240 TLSYLPPLSQEDLLKQIEYLIRNNWIPCLEFSKVGFVYRENNRSPGYYDGRYWTMWKLPM 419
           TLSYLPPL+ EDLLKQIEYL+R+ W+PCLEFSKVGFVYREN+RSPGYYDGRYWTMWKLPM
Sbjct: 61  TLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYYDGRYWTMWKLPM 120

Query: 420 FGCTDASQVLKEVSEVNKEYPDAFVRIIGFDNVRQVQLISFIAYKPPGCQESGG 581
           FGCTDA+QVLKE+ E  K YPDAFVRIIGFDNVRQVQLISFIAYKPPGC+ESGG
Sbjct: 121 FGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPGCEESGG 174


>ref|NP_001066604.1| Os12g0291100 [Oryza sativa (japonica cultivar-group)]
 sp|P18566|RBS2_ORYSJ Ribulose bisphosphate carboxylase small chain A, chloroplast
           precursor (RuBisCO small subunit A)
 gb|AAR19268.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           [Oryza sativa (japonica cultivar-group)]
 gb|ABA97169.1| Ribulose bisphosphate carboxylase small chain A, chloroplast
           precursor, putative, expressed [Oryza sativa (japonica
           cultivar-group)]
 gb|ABG21974.1| Ribulose bisphosphate carboxylase small chain A, chloroplast
           precursor, putative, expressed [Oryza sativa (japonica
           cultivar-group)]
 gb|ABG21975.1| Ribulose bisphosphate carboxylase small chain A, chloroplast
           precursor, putative, expressed [Oryza sativa (japonica
           cultivar-group)]
 dbj|BAF29623.1| Os12g0291100 [Oryza sativa (japonica cultivar-group)]
 gb|ABR25686.1| ribulose bisphosphate carboxylase small chain c [Oryza sativa
           (indica cultivar-group)]
          Length = 175

 Score =  325 bits (834), Expect = 2e-87
 Identities = 152/174 (87%), Positives = 166/174 (95%)
 Frame = +3

Query: 60  MAPSVMASSATSVAPFQGLKSTAGLPVSRRSSSAGLGSVSNGGRIRCMQVWPIVGIKKFE 239
           MAP+VMASSATSVAPFQGLKSTAGLPVSRRS+++G G+VSNGGRI+CMQVWPI GIKKFE
Sbjct: 1   MAPTVMASSATSVAPFQGLKSTAGLPVSRRSTNSGFGNVSNGGRIKCMQVWPIEGIKKFE 60

Query: 240 TLSYLPPLSQEDLLKQIEYLIRNNWIPCLEFSKVGFVYRENNRSPGYYDGRYWTMWKLPM 419
           TLSYLPPL+ EDLLKQIEYL+R+ W+PCLEFSKVGFVYREN+RSPGYYDGRYWTMWKLPM
Sbjct: 61  TLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYYDGRYWTMWKLPM 120

Query: 420 FGCTDASQVLKEVSEVNKEYPDAFVRIIGFDNVRQVQLISFIAYKPPGCQESGG 581
           FGCTDA+QVLKE+ E  K YPDAFVRIIGFDNVRQVQLISFIAYKPPGC+ESGG
Sbjct: 121 FGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPGCEESGG 174


>gb|EAY82834.1| hypothetical protein OsI_036793 [Oryza sativa (indica
           cultivar-group)]
          Length = 175

 Score =  324 bits (831), Expect = 4e-87
 Identities = 153/174 (87%), Positives = 164/174 (94%)
 Frame = +3

Query: 60  MAPSVMASSATSVAPFQGLKSTAGLPVSRRSSSAGLGSVSNGGRIRCMQVWPIVGIKKFE 239
           MAPSVMASSATSVAPFQGLK TAGLPV+RRSSS+  G+VSNGGRIRCMQVWPI GIKKFE
Sbjct: 1   MAPSVMASSATSVAPFQGLKFTAGLPVNRRSSSSSFGNVSNGGRIRCMQVWPIEGIKKFE 60

Query: 240 TLSYLPPLSQEDLLKQIEYLIRNNWIPCLEFSKVGFVYRENNRSPGYYDGRYWTMWKLPM 419
           TLSYLPPL+ EDLLKQIEYL+R+ W+PCLEFSKVGFVYREN+RSPGYYDGRYWTMWKLPM
Sbjct: 61  TLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYYDGRYWTMWKLPM 120

Query: 420 FGCTDASQVLKEVSEVNKEYPDAFVRIIGFDNVRQVQLISFIAYKPPGCQESGG 581
           FGCTDA+QVLKE+ E  K YPDAFVRIIGFDNVRQVQLISFIAYKPPGC+ESGG
Sbjct: 121 FGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPGCEESGG 174


>ref|NP_001066559.1| Os12g0274700 [Oryza sativa (japonica cultivar-group)]
 sp|Q0INY7|RBS1_ORYSJ Ribulose bisphosphate carboxylase small chain, chloroplast
           precursor (RuBisCO small subunit) (Ribulose bisphosphate
           carboxylase small chain C) (RuBisCO small subunit C)
 sp|A2Y205|RBS1_ORYSI Ribulose bisphosphate carboxylase small chain, chloroplast
           precursor (RuBisCO small subunit) (Ribulose bisphosphate
           carboxylase small chain C) (RuBisCO small subunit C)
 dbj|BAA00538.1| small subunit of ribulose-1,5-bisphosphate carboxylase [Oryza
           sativa Japonica Group]
 gb|AAB70544.1| ribulose 1,5-bisphosphate carboxylase small subunit [Oryza sativa]
 gb|ABA97056.1| Ribulose bisphosphate carboxylase small chain C, chloroplast
           precursor, putative, expressed [Oryza sativa (japonica
           cultivar-group)]
 dbj|BAF29578.1| Os12g0274700 [Oryza sativa (japonica cultivar-group)]
 gb|EAZ33426.1| hypothetical protein OsJ_016909 [Oryza sativa (japonica
           cultivar-group)]
 gb|ABR25908.1| chloroplast ribulose bisphosphate carboxylase small chain precursor
           [Oryza sativa (indica cultivar-group)]
 prf||1508256A ribulose bisphosphate carboxylase S
          Length = 175

 Score =  322 bits (825), Expect = 2e-86
 Identities = 150/174 (86%), Positives = 164/174 (94%)
 Frame = +3

Query: 60  MAPSVMASSATSVAPFQGLKSTAGLPVSRRSSSAGLGSVSNGGRIRCMQVWPIVGIKKFE 239
           MAPSVMASSAT+VAPFQGLKSTAG+PV+RRS ++  G+VSNGGRIRCMQVWPI GIKKFE
Sbjct: 1   MAPSVMASSATTVAPFQGLKSTAGMPVARRSGNSSFGNVSNGGRIRCMQVWPIEGIKKFE 60

Query: 240 TLSYLPPLSQEDLLKQIEYLIRNNWIPCLEFSKVGFVYRENNRSPGYYDGRYWTMWKLPM 419
           TLSYLPPL+ EDLLKQIEYL+R+ W+PCLEFSKVGFVYREN+RSPGYYDGRYWTMWKLPM
Sbjct: 61  TLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYYDGRYWTMWKLPM 120

Query: 420 FGCTDASQVLKEVSEVNKEYPDAFVRIIGFDNVRQVQLISFIAYKPPGCQESGG 581
           FGCTDA+QVLKE+ E  K YPDAFVRIIGFDNVRQVQLISFIAYKPPGC+ESGG
Sbjct: 121 FGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPGCEESGG 174