BLASTX 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst002m20 (1147 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 5,815,196 sequences; 2,006,227,497 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAD13027.1| hypothetical protein [Oryza sativa (japonica cul... 280 2e-73 gb|EAY87344.1| hypothetical protein OsI_008577 [Oryza sativa (in... 273 2e-71 ref|NP_001047971.1| Os02g0723300 [Oryza sativa (japonica cultiva... 273 2e-71 emb|CAO40474.1| unnamed protein product [Vitis vinifera] 132 3e-29 gb|ABN08874.1| RNA polymerase Rpb4 [Medicago truncatula] 116 2e-24 >dbj|BAD13027.1| hypothetical protein [Oryza sativa (japonica cultivar-group)] Length = 238 Score = 280 bits (715), Expect = 2e-73 Identities = 156/228 (68%), Positives = 177/228 (77%), Gaps = 7/228 (3%) Frame = +1 Query: 193 LASRPGAANGRQNNSANIPLVTIGSDSDSEGFVEEVTPMYSKSNGKAASESLKTGGKPSS 372 +AS+ G+ RQN+SANIP V I SDSDSEGFVEE+ + SK+NGKAASESLKTGGK SS Sbjct: 18 IASKKGSL--RQNSSANIPHVNIDSDSDSEGFVEELPRVNSKTNGKAASESLKTGGKASS 75 Query: 373 FSKGEXXXXXXXXXXXXXXXXXXXXXMPTKSDADLKLELDIPPNSRMLMNCEAAELLQEI 552 KG+ + KSDA+LKLELD+PPNS +LMNCE AELLQEI Sbjct: 76 --KGQTGKGGNAGKGGKGSASAR---VSAKSDAELKLELDMPPNSCILMNCEVAELLQEI 130 Query: 553 HEHMAILSEDPNIKIPESFDKAFQYAKDGNHFTTAKSVKQVLD-------PLKKCGVNDG 711 HEHMAILSEDP IKIPESFDKAFQY K+GN F+TA+SVKQVLD PL+K GV+DG Sbjct: 131 HEHMAILSEDPKIKIPESFDKAFQYVKEGNQFSTAQSVKQVLDSLTSIRSPLRKYGVSDG 190 Query: 712 EICLIANIGPETIEEVYALVPSLRATRSLNEGPIMEALTALANIKAPK 855 E+CLIAN+GPETIEEVYALVPSL+ATRSLNE PIMEALTALA+IKA K Sbjct: 191 EMCLIANVGPETIEEVYALVPSLKATRSLNESPIMEALTALADIKAAK 238 >gb|EAY87344.1| hypothetical protein OsI_008577 [Oryza sativa (indica cultivar-group)] Length = 242 Score = 273 bits (698), Expect = 2e-71 Identities = 153/232 (65%), Positives = 175/232 (75%), Gaps = 11/232 (4%) Frame = +1 Query: 193 LASRPGAANGRQNNSANIPLVTIGSDSDSEGFVEEVTPMYSKSNGKAASESLKTGGKPSS 372 +AS+ G+ RQN+SANIP V I SDSDSEGFVEE+ + SK+NGKAASESLKTGGK SS Sbjct: 18 IASKKGSL--RQNSSANIPHVNIDSDSDSEGFVEELPRVNSKTNGKAASESLKTGGKASS 75 Query: 373 FSKGEXXXXXXXXXXXXXXXXXXXXXMPTKSDADLKLELDIPPNSRMLMNCEAAELLQEI 552 KG+ + KSDA+LKLELD+PPNS +LMNCE AELLQEI Sbjct: 76 --KGQTGKGGNAGKGGKGSASAR---VSAKSDAELKLELDMPPNSCILMNCEVAELLQEI 130 Query: 553 HEHMAILSEDPNIKIPESFDKAFQYAKDGNHFTTAKSVKQ-----------VLDPLKKCG 699 HEHMAILSEDP IKIPESFDKAFQY K+GN F+TA+SVKQ + PL+K G Sbjct: 131 HEHMAILSEDPKIKIPESFDKAFQYVKEGNQFSTAQSVKQQANWFFSSFTSIRSPLRKYG 190 Query: 700 VNDGEICLIANIGPETIEEVYALVPSLRATRSLNEGPIMEALTALANIKAPK 855 V+DGE+CLIAN+GPETIEEVYALVPSL+ATRSLNE PIMEALTALA+IKA K Sbjct: 191 VSDGEMCLIANVGPETIEEVYALVPSLKATRSLNESPIMEALTALADIKAAK 242 >ref|NP_001047971.1| Os02g0723300 [Oryza sativa (japonica cultivar-group)] dbj|BAF09885.1| Os02g0723300 [Oryza sativa (japonica cultivar-group)] gb|EAZ24445.1| hypothetical protein OsJ_007928 [Oryza sativa (japonica cultivar-group)] Length = 242 Score = 273 bits (698), Expect = 2e-71 Identities = 153/232 (65%), Positives = 175/232 (75%), Gaps = 11/232 (4%) Frame = +1 Query: 193 LASRPGAANGRQNNSANIPLVTIGSDSDSEGFVEEVTPMYSKSNGKAASESLKTGGKPSS 372 +AS+ G+ RQN+SANIP V I SDSDSEGFVEE+ + SK+NGKAASESLKTGGK SS Sbjct: 18 IASKKGSL--RQNSSANIPHVNIDSDSDSEGFVEELPRVNSKTNGKAASESLKTGGKASS 75 Query: 373 FSKGEXXXXXXXXXXXXXXXXXXXXXMPTKSDADLKLELDIPPNSRMLMNCEAAELLQEI 552 KG+ + KSDA+LKLELD+PPNS +LMNCE AELLQEI Sbjct: 76 --KGQTGKGGNAGKGGKGSASAR---VSAKSDAELKLELDMPPNSCILMNCEVAELLQEI 130 Query: 553 HEHMAILSEDPNIKIPESFDKAFQYAKDGNHFTTAKSVKQ-----------VLDPLKKCG 699 HEHMAILSEDP IKIPESFDKAFQY K+GN F+TA+SVKQ + PL+K G Sbjct: 131 HEHMAILSEDPKIKIPESFDKAFQYVKEGNQFSTAQSVKQQANWFFSSLTSIRSPLRKYG 190 Query: 700 VNDGEICLIANIGPETIEEVYALVPSLRATRSLNEGPIMEALTALANIKAPK 855 V+DGE+CLIAN+GPETIEEVYALVPSL+ATRSLNE PIMEALTALA+IKA K Sbjct: 191 VSDGEMCLIANVGPETIEEVYALVPSLKATRSLNESPIMEALTALADIKAAK 242 >emb|CAO40474.1| unnamed protein product [Vitis vinifera] Length = 244 Score = 132 bits (333), Expect = 3e-29 Identities = 66/132 (50%), Positives = 93/132 (70%) Frame = +1 Query: 472 DLKLELDIPPNSRMLMNCEAAELLQEIHEHMAILSEDPNIKIPESFDKAFQYAKDGNHFT 651 +L++E ++P N++ +M+CEAA +L+ I E M +LSEDP IKIP SF+K QYA+ N + Sbjct: 100 ELRIEQELPKNAKCMMDCEAALILKGIQEQMVVLSEDPTIKIPLSFNKGLQYAQSSNCYA 159 Query: 652 TAKSVKQVLDPLKKCGVNDGEICLIANIGPETIEEVYALVPSLRATRSLNEGPIMEALTA 831 + +SV+ VL+PL K GV+DGEIC+IAN PETI+EV+ALVPSL+ S P+ + L Sbjct: 160 SPQSVRLVLEPLSKYGVSDGEICVIANTCPETIDEVFALVPSLKPKWSTLREPLKDVLRG 219 Query: 832 LANIKAPK*ISN 867 LA +K SN Sbjct: 220 LAELKHSNQSSN 231 >gb|ABN08874.1| RNA polymerase Rpb4 [Medicago truncatula] Length = 223 Score = 116 bits (291), Expect = 2e-24 Identities = 56/125 (44%), Positives = 85/125 (68%), Gaps = 2/125 (1%) Frame = +1 Query: 478 KLELDIPPNSRMLMNCEAAELLQEIHEHMAILSEDPNIKIPESFDKAFQYAKDGNH--FT 651 +++ ++P N + LM+CEAA +LQ I + M LS DP+IK+P SFDK YAK + ++ Sbjct: 96 RVDQELPENFKCLMDCEAAVMLQGIQDQMVALSRDPSIKMPASFDKGLYYAKSSSSSKYS 155 Query: 652 TAKSVKQVLDPLKKCGVNDGEICLIANIGPETIEEVYALVPSLRATRSLNEGPIMEALTA 831 +SV+ L+PL + + EIC+IAN+ PET +EV+AL+PSL++ R +N P+ EAL+ Sbjct: 156 NPESVRHTLEPLMNHDLTESEICVIANVCPETADEVFALLPSLKSKRGINSQPVEEALSE 215 Query: 832 LANIK 846 LA K Sbjct: 216 LAKFK 220