BLASTX 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf055c17 (1546 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 5,815,196 sequences; 2,006,227,497 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAF32399.1|AF224499_1 KNOTTED-1-like homeobox protein b [Trit... 627 e-178 sp|P46609|OSH1_ORYSJ Homeobox protein OSH1 >gi|478420|pir||JQ237... 625 e-177 gb|AAF32398.1|AF224498_1 KNOTTED-1-like homeobox protein a [Trit... 625 e-177 dbj|BAA03959.1| homeobox protein [Oryza sativa (japonica cultiva... 624 e-177 sp|Q43484|KNOX3_HORVU Homeobox protein KNOX3 (Hooded protein) >g... 620 e-176 >gb|AAF32399.1|AF224499_1 KNOTTED-1-like homeobox protein b [Triticum aestivum] gb|AAF32400.1|AF224500_1 KNOTTED-1-like homeobox protein d [Triticum aestivum] dbj|BAD83802.1| KN1 homeobox protein [Triticum aestivum] dbj|BAD83803.1| KN1 homeobox protein [Triticum aestivum] Length = 363 Score = 627 bits (1617), Expect = e-178 Identities = 320/365 (87%), Positives = 334/365 (91%), Gaps = 10/365 (2%) Frame = +3 Query: 198 MEEISHHFGVGATSHGQHHH--PWGSS-LSAVVAPPPQPL-----SAG-LPHTPLTLNTA 350 MEEI HHFG+GAT+HGQHH PWGSS LSAV+APPPQ SAG L H+PL+LNTA Sbjct: 1 MEEIGHHFGLGATAHGQHHSQLPWGSSPLSAVIAPPPQQQQQQQQSAGYLAHSPLSLNTA 60 Query: 351 PTTGNNGSGSVGGNPVLQLANGSLLDACAKA-KEPSAPSSSYAADVEAIKAKIISHPHYS 527 P +G++G GS NPVLQLANGSLL+ACAKA KEPS SSSYAADVEAIKAKIISHPHYS Sbjct: 61 PPSGSHGGGSGCSNPVLQLANGSLLEACAKAAKEPS--SSSYAADVEAIKAKIISHPHYS 118 Query: 528 SLLAAYLDCQKVGAPPEVAARLTAVAQDLELRQRTSLSGLGAATEPELDQFMEAYHEMLV 707 SLLAAYLDCQKVGAPPEV ARLTAVAQDLELRQRT+L LG ATEPELDQFMEAYHEMLV Sbjct: 119 SLLAAYLDCQKVGAPPEVLARLTAVAQDLELRQRTALGSLGTATEPELDQFMEAYHEMLV 178 Query: 708 KYREELTRPLQEAMEFLRRVESQLNSLSISGRSLRNILSSGSSEEDQEGSGGETELPEID 887 KYREELTRPLQEAMEFLRRVE+QLNSLSISGRSLRNILSSGSSEEDQEGSGGETELPEID Sbjct: 179 KYREELTRPLQEAMEFLRRVETQLNSLSISGRSLRNILSSGSSEEDQEGSGGETELPEID 238 Query: 888 AHGVDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKDARQQLLNWWELHYKWPYPSES 1067 AHGVDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKDARQQLL+WWE+HYKWPYPSES Sbjct: 239 AHGVDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKDARQQLLSWWEMHYKWPYPSES 298 Query: 1068 QKVALAESTGLDLKQINNWFINQRKRHWKPSDEMQFVMMDGYHPTNAAFYMDGHFINDGS 1247 QKVALAESTGLDLKQINNWFINQRKRHWKPSDEMQFVMMD YHP NAAFYMDGHF+ND Sbjct: 299 QKVALAESTGLDLKQINNWFINQRKRHWKPSDEMQFVMMDAYHPPNAAFYMDGHFVNDSG 358 Query: 1248 LYRLG 1262 LYR G Sbjct: 359 LYRFG 363 >sp|P46609|OSH1_ORYSJ Homeobox protein OSH1 pir||JQ2379 homeobox 1 protein OSH1 - rice gb|AAS07158.1| homeobox 1 protein OSH1 [Oryza sativa (japonica cultivar-group)] gb|ABF98651.1| Homeobox protein OSH1, putative, expressed [Oryza sativa (japonica cultivar-group)] gb|ABF98652.1| Homeobox protein OSH1, putative, expressed [Oryza sativa (japonica cultivar-group)] Length = 361 Score = 625 bits (1613), Expect = e-177 Identities = 321/370 (86%), Positives = 329/370 (88%), Gaps = 15/370 (4%) Frame = +3 Query: 198 MEEISHHFGV-------GATSHGQHHHPWGSSLSAVVAPPPQPL-------SAGLPHTPL 335 MEEISHHFGV G H HHHPWGSSLSA+VAPPP P + G+ HTPL Sbjct: 1 MEEISHHFGVVGASGVHGGHQHQHHHHPWGSSLSAIVAPPPPPQLQQQQTQAGGMAHTPL 60 Query: 336 TLNTAPTTGNNGSGSVGGNPVLQLANGSLLDACAKAKEPSAPSSSYAADVEAIKAKIISH 515 TLNTA + GNPVLQLANGSLLDAC KAKE SA S+SYAADVEAIKAKIISH Sbjct: 61 TLNTA--------AAAVGNPVLQLANGSLLDACGKAKEASA-SASYAADVEAIKAKIISH 111 Query: 516 PHYSSLLAAYLDCQKVGAPPEVAARLTAVAQDLELRQRTSLSGLGAATEPELDQFMEAYH 695 PHYSSLLAAYLDCQKVGAPPEVAARLTAVAQDLELRQRT+L LGAATEPELDQFMEAYH Sbjct: 112 PHYSSLLAAYLDCQKVGAPPEVAARLTAVAQDLELRQRTALGVLGAATEPELDQFMEAYH 171 Query: 696 EMLVKYREELTRPLQEAMEFLRRVESQLNSLSISGRSLRNILSSGSSEEDQEGSGGETEL 875 EMLVKYREELTRPLQEAMEFLRRVE+QLN+LSISGRSLRNILSSGSSEEDQEGSGGETEL Sbjct: 172 EMLVKYREELTRPLQEAMEFLRRVETQLNTLSISGRSLRNILSSGSSEEDQEGSGGETEL 231 Query: 876 PEIDAHGVDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKDARQQLLNWWELHYKWPY 1055 PEIDAHGVDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKDARQQLLNWWELHYKWPY Sbjct: 232 PEIDAHGVDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKDARQQLLNWWELHYKWPY 291 Query: 1056 PSESQKVALAESTGLDLKQINNWFINQRKRHWKPSDEMQFVMMDGYHPTN-AAFYMDGHF 1232 PSESQKVALAESTGLDLKQINNWFINQRKRHWKPSDEMQFVMMDGYHPTN AAFYMDGHF Sbjct: 292 PSESQKVALAESTGLDLKQINNWFINQRKRHWKPSDEMQFVMMDGYHPTNAAAFYMDGHF 351 Query: 1233 INDGSLYRLG 1262 INDG LYRLG Sbjct: 352 INDGGLYRLG 361 >gb|AAF32398.1|AF224498_1 KNOTTED-1-like homeobox protein a [Triticum aestivum] dbj|BAD83801.1| KN1 homeobox protein [Triticum aestivum] Length = 362 Score = 625 bits (1611), Expect = e-177 Identities = 318/364 (87%), Positives = 333/364 (91%), Gaps = 9/364 (2%) Frame = +3 Query: 198 MEEISHHFGVGATSHGQHHH--PWGSS-LSAVVAPPPQPL----SAG-LPHTPLTLNTAP 353 MEEI HHFG+GAT+HGQHH PWGSS LSAV+APPPQ SAG L H+PL+LNTAP Sbjct: 1 MEEIGHHFGLGATAHGQHHSQLPWGSSPLSAVIAPPPQQQQQQQSAGYLAHSPLSLNTAP 60 Query: 354 TTGNNGSGSVGGNPVLQLANGSLLDACAKA-KEPSAPSSSYAADVEAIKAKIISHPHYSS 530 +G++G G+ NPVLQLANGSLL+ACAKA KEPS SSSYAADVEAIKAKIISHPHYSS Sbjct: 61 PSGSHGGGTGCSNPVLQLANGSLLEACAKAAKEPS--SSSYAADVEAIKAKIISHPHYSS 118 Query: 531 LLAAYLDCQKVGAPPEVAARLTAVAQDLELRQRTSLSGLGAATEPELDQFMEAYHEMLVK 710 LLAAYLDCQKVGAPPEV ARLTAVAQDLELRQRT+L G ATEPELDQFMEAYHEMLVK Sbjct: 119 LLAAYLDCQKVGAPPEVLARLTAVAQDLELRQRTALGSFGTATEPELDQFMEAYHEMLVK 178 Query: 711 YREELTRPLQEAMEFLRRVESQLNSLSISGRSLRNILSSGSSEEDQEGSGGETELPEIDA 890 YREELTRPLQEAMEFLRRVE+QLNSLSISGRSLRNILSSGSSEEDQEGSGGETELPEIDA Sbjct: 179 YREELTRPLQEAMEFLRRVETQLNSLSISGRSLRNILSSGSSEEDQEGSGGETELPEIDA 238 Query: 891 HGVDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKDARQQLLNWWELHYKWPYPSESQ 1070 HGVDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKDARQQLL+WWE+HYKWPYPSESQ Sbjct: 239 HGVDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKDARQQLLSWWEMHYKWPYPSESQ 298 Query: 1071 KVALAESTGLDLKQINNWFINQRKRHWKPSDEMQFVMMDGYHPTNAAFYMDGHFINDGSL 1250 KVALAESTGLDLKQINNWFINQRKRHWKPSDEMQFVMMD YHP NAAFYMDGHF+ND L Sbjct: 299 KVALAESTGLDLKQINNWFINQRKRHWKPSDEMQFVMMDAYHPPNAAFYMDGHFVNDSGL 358 Query: 1251 YRLG 1262 YR G Sbjct: 359 YRFG 362 >dbj|BAA03959.1| homeobox protein [Oryza sativa (japonica cultivar-group)] Length = 361 Score = 624 bits (1608), Expect = e-177 Identities = 320/370 (86%), Positives = 328/370 (88%), Gaps = 15/370 (4%) Frame = +3 Query: 198 MEEISHHFGV-------GATSHGQHHHPWGSSLSAVVAPPPQPL-------SAGLPHTPL 335 MEEISHHFGV G H HHHPWGSSLSA+VAPPP P + G+ HTPL Sbjct: 1 MEEISHHFGVVGASGVHGGHQHQHHHHPWGSSLSAIVAPPPPPQLQQQQTQAGGMAHTPL 60 Query: 336 TLNTAPTTGNNGSGSVGGNPVLQLANGSLLDACAKAKEPSAPSSSYAADVEAIKAKIISH 515 TLNTA + GNPVLQLANGSLLDAC KAKE SA S+SYA DVEAIKAKIISH Sbjct: 61 TLNTA--------AAAVGNPVLQLANGSLLDACGKAKEASA-SASYAPDVEAIKAKIISH 111 Query: 516 PHYSSLLAAYLDCQKVGAPPEVAARLTAVAQDLELRQRTSLSGLGAATEPELDQFMEAYH 695 PHYSSLLAAYLDCQKVGAPPEVAARLTAVAQDLELRQRT+L LGAATEPELDQFMEAYH Sbjct: 112 PHYSSLLAAYLDCQKVGAPPEVAARLTAVAQDLELRQRTALGVLGAATEPELDQFMEAYH 171 Query: 696 EMLVKYREELTRPLQEAMEFLRRVESQLNSLSISGRSLRNILSSGSSEEDQEGSGGETEL 875 EMLVKYREELTRPLQEAMEFLRRVE+QLN+LSISGRSLRNILSSGSSEEDQEGSGGETEL Sbjct: 172 EMLVKYREELTRPLQEAMEFLRRVETQLNTLSISGRSLRNILSSGSSEEDQEGSGGETEL 231 Query: 876 PEIDAHGVDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKDARQQLLNWWELHYKWPY 1055 PEIDAHGVDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKDARQQLLNWWELHYKWPY Sbjct: 232 PEIDAHGVDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKDARQQLLNWWELHYKWPY 291 Query: 1056 PSESQKVALAESTGLDLKQINNWFINQRKRHWKPSDEMQFVMMDGYHPTN-AAFYMDGHF 1232 PSESQKVALAESTGLDLKQINNWFINQRKRHWKPSDEMQFVMMDGYHPTN AAFYMDGHF Sbjct: 292 PSESQKVALAESTGLDLKQINNWFINQRKRHWKPSDEMQFVMMDGYHPTNAAAFYMDGHF 351 Query: 1233 INDGSLYRLG 1262 INDG LYRLG Sbjct: 352 INDGGLYRLG 361 >sp|Q43484|KNOX3_HORVU Homeobox protein KNOX3 (Hooded protein) emb|CAA58503.1| Knox3 [Hordeum vulgare] Length = 364 Score = 620 bits (1599), Expect = e-176 Identities = 316/366 (86%), Positives = 334/366 (91%), Gaps = 11/366 (3%) Frame = +3 Query: 198 MEEISHHFGVGATSHGQHHH--PWGSS-LSAVVAPPPQPL------SAG-LPHTPLTLNT 347 MEEI HHFG+GAT+HGQHH PWGSS LSAV++PPPQ SAG L H+PL+LNT Sbjct: 1 MEEIGHHFGLGATAHGQHHSQLPWGSSPLSAVISPPPQQQQQHQQQSAGYLAHSPLSLNT 60 Query: 348 APTTGNNGSGSVGGNPVLQLANGSLLDACAKA-KEPSAPSSSYAADVEAIKAKIISHPHY 524 AP ++G GS NPVLQLANGSLL+ACAKA KEPS SSSYAADVEAIKAKIISHPHY Sbjct: 61 APPGVSHGGGSGCSNPVLQLANGSLLEACAKAAKEPS--SSSYAADVEAIKAKIISHPHY 118 Query: 525 SSLLAAYLDCQKVGAPPEVAARLTAVAQDLELRQRTSLSGLGAATEPELDQFMEAYHEML 704 SSLLAAYLDCQKVGAPPEV+ARLTAVAQDLELRQRT+L GLG ATEPELDQFMEAYHEML Sbjct: 119 SSLLAAYLDCQKVGAPPEVSARLTAVAQDLELRQRTALGGLGTATEPELDQFMEAYHEML 178 Query: 705 VKYREELTRPLQEAMEFLRRVESQLNSLSISGRSLRNILSSGSSEEDQEGSGGETELPEI 884 VKYREELTRPLQEAMEFLRRVE+QLNSLSISGRSLRNILS+GSSEEDQEGSGGETELPEI Sbjct: 179 VKYREELTRPLQEAMEFLRRVETQLNSLSISGRSLRNILSTGSSEEDQEGSGGETELPEI 238 Query: 885 DAHGVDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKDARQQLLNWWELHYKWPYPSE 1064 DAHGVDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPK+ARQQLL+WWE+HYKWPYPSE Sbjct: 239 DAHGVDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQQLLSWWEMHYKWPYPSE 298 Query: 1065 SQKVALAESTGLDLKQINNWFINQRKRHWKPSDEMQFVMMDGYHPTNAAFYMDGHFINDG 1244 SQKVALAESTGLDLKQINNWFINQRKRHWKP+DEMQFVMMD YHP NAAFYMDGHF+ND Sbjct: 299 SQKVALAESTGLDLKQINNWFINQRKRHWKPTDEMQFVMMDAYHPPNAAFYMDGHFVNDS 358 Query: 1245 SLYRLG 1262 LYR G Sbjct: 359 GLYRFG 364