BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphylf054h16
         (1284 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001050349.1| Os03g0411500 [Oryza sativa (japonica cultiva...   452   e-125
gb|EAY90430.1| hypothetical protein OsI_011663 [Oryza sativa (in...   360   9e-98
gb|ABK94496.1| unknown [Populus trichocarpa]                          318   7e-85
gb|AAC04810.1| clp-like energy-dependent protease [Fritillaria a...   316   2e-84
ref|NP_563893.1| CLPP6 (Clp protease proteolytic subunit 6); end...   309   3e-82

>ref|NP_001050349.1| Os03g0411500 [Oryza sativa (japonica cultivar-group)]
 gb|AAO37504.2| putative clp-like energy-dependent protease [Oryza sativa (japonica
           cultivar-group)]
 gb|ABF96569.1| Clp protease family protein, expressed [Oryza sativa (japonica
           cultivar-group)]
 dbj|BAF12263.1| Os03g0411500 [Oryza sativa (japonica cultivar-group)]
          Length = 259

 Score =  452 bits (1163), Expect = e-125
 Identities = 230/259 (88%), Positives = 241/259 (93%)
 Frame = +2

Query: 86  MAPMAISTPLAVRTSPFRLLSHGRSGTGACLGIRGLQFVTPGVSSRLDERIHCHYYLWQN 265
           MAPMAISTPLA+R SP RLLS  RSG  + + + G QFV PG+SS+LDERIHCH  L +N
Sbjct: 1   MAPMAISTPLALRASPTRLLSRRRSGAKSGVALPGPQFVPPGISSKLDERIHCHSSLRKN 60

Query: 266 TIVASENENPPLMPAIMTPGGPLDLATVLLGNRIIFIGQYINSQVAQRVISQLVTLSAVD 445
           TIVASENENPPLMPAIMTP G LDLATVLLGNRIIFIGQYINSQVAQRVISQLVTL+AVD
Sbjct: 61  TIVASENENPPLMPAIMTPAGALDLATVLLGNRIIFIGQYINSQVAQRVISQLVTLAAVD 120

Query: 446 EKADILIYLNCPGGSLYSILAIYDCMSWIKPKVGTVCFGVVASQAAIILSGGEKGMRYAM 625
           E+ADILIYLNCPGGSLYSILAIYDCMSWIKPKVGTVCFGVVASQAAIIL+GGEKGMRYAM
Sbjct: 121 EEADILIYLNCPGGSLYSILAIYDCMSWIKPKVGTVCFGVVASQAAIILAGGEKGMRYAM 180

Query: 626 PNARVMIHQPQGGSEGNVEEVRRQVGETIYARDKVDKMFAAFTGQPLDIVQQWTERDRFM 805
           PNARVMIHQPQG SEGNVEEVRRQVGETIYARDKVDKMFAAFTGQ LD+VQQWTERDRFM
Sbjct: 181 PNARVMIHQPQGVSEGNVEEVRRQVGETIYARDKVDKMFAAFTGQTLDMVQQWTERDRFM 240

Query: 806 SSSEAMDFGLVDALLETRY 862
           SSSEAMDFGLVDALLETRY
Sbjct: 241 SSSEAMDFGLVDALLETRY 259


>gb|EAY90430.1| hypothetical protein OsI_011663 [Oryza sativa (indica
           cultivar-group)]
 gb|EAZ27303.1| hypothetical protein OsJ_010786 [Oryza sativa (japonica
           cultivar-group)]
          Length = 274

 Score =  360 bits (925), Expect = 9e-98
 Identities = 202/291 (69%), Positives = 217/291 (74%), Gaps = 32/291 (10%)
 Frame = +2

Query: 86  MAPMAISTPLAVRTSPFRLLSHGRSGTGACLGIRGL-------------QFVTPGVSSRL 226
           MAPMAISTPLA+R SP RLLS  RSG  + + + G              ++   G+S  +
Sbjct: 1   MAPMAISTPLALRASPTRLLSRRRSGAKSGVALPGFAKHIEPLNVGIIQEYADLGLSEPV 60

Query: 227 DERIHCHYYLWQNTIVASENENPPLMPAIMTPGGPLDLATVLLGNRIIFIGQYINSQVAQ 406
                 +  +W+NTIVASENENPPLMPAIMTP G LDLATVLLGNRIIFIGQYINSQVAQ
Sbjct: 61  STPSWAN--VWKNTIVASENENPPLMPAIMTPAGALDLATVLLGNRIIFIGQYINSQVAQ 118

Query: 407 RVISQLVTLSAVDEKADILIYLNCPGGSLYSILAIYDCMSW------------------- 529
           RVISQLVTL+AVDE+ADILIYLNCPGGSLYSILAIYDCMSW                   
Sbjct: 119 RVISQLVTLAAVDEEADILIYLNCPGGSLYSILAIYDCMSWYILDMSICHAETVLIGFGL 178

Query: 530 IKPKVGTVCFGVVASQAAIILSGGEKGMRYAMPNARVMIHQPQGGSEGNVEEVRRQVGET 709
           IKPKVGTVCFGVVASQAAIIL+GGEKGMRYAMPNARVMIHQPQG SEGNVEEVRRQVGET
Sbjct: 179 IKPKVGTVCFGVVASQAAIILAGGEKGMRYAMPNARVMIHQPQGVSEGNVEEVRRQVGET 238

Query: 710 IYARDKVDKMFAAFTGQPLDIVQQWTERDRFMSSSEAMDFGLVDALLETRY 862
           IYARDKVDKMFAAFTGQ LD+               AMDFGLVDALLETRY
Sbjct: 239 IYARDKVDKMFAAFTGQTLDM---------------AMDFGLVDALLETRY 274


>gb|ABK94496.1| unknown [Populus trichocarpa]
          Length = 265

 Score =  318 bits (814), Expect = 7e-85
 Identities = 149/197 (75%), Positives = 176/197 (89%)
 Frame = +2

Query: 272 VASENENPPLMPAIMTPGGPLDLATVLLGNRIIFIGQYINSQVAQRVISQLVTLSAVDEK 451
           V ++  NPP+MPA+MTPGGP+DL++VL  NRIIFIGQ INSQVAQRVISQLVTL+ +DEK
Sbjct: 69  VEAKGGNPPIMPAVMTPGGPMDLSSVLFRNRIIFIGQPINSQVAQRVISQLVTLATIDEK 128

Query: 452 ADILIYLNCPGGSLYSILAIYDCMSWIKPKVGTVCFGVVASQAAIILSGGEKGMRYAMPN 631
            DIL+YLNCPGGS YS+LAIYDCMSWIKPKVGTVCFGV ASQ A++LSGGEKGMRYAMPN
Sbjct: 129 TDILLYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLSGGEKGMRYAMPN 188

Query: 632 ARVMIHQPQGGSEGNVEEVRRQVGETIYARDKVDKMFAAFTGQPLDIVQQWTERDRFMSS 811
           AR+MIHQPQGG  G+VE+VRRQV E + AR K+D+M+A FTGQPL+ VQQ+TERDRF+S+
Sbjct: 189 ARIMIHQPQGGCGGHVEDVRRQVNEAVQARHKIDQMYATFTGQPLEKVQQYTERDRFLST 248

Query: 812 SEAMDFGLVDALLETRY 862
           SEAM+FGL+D +LET Y
Sbjct: 249 SEAMEFGLIDGILETEY 265


>gb|AAC04810.1| clp-like energy-dependent protease [Fritillaria agrestis]
          Length = 267

 Score =  316 bits (810), Expect = 2e-84
 Identities = 158/267 (59%), Positives = 201/267 (75%), Gaps = 8/267 (2%)
 Frame = +2

Query: 86  MAPMAISTPLAV-RTSPFRLLSHGRSGTGACLGIR-------GLQFVTPGVSSRLDERIH 241
           MAP A+S PLA+   +P    +  R      +  +       G+   T  +  +L +   
Sbjct: 1   MAPSAVSAPLALFSAAPREATATLRPSPSVRIPFKPRFFDRCGMFGGTNALPLKLTDPAS 60

Query: 242 CHYYLWQNTIVASENENPPLMPAIMTPGGPLDLATVLLGNRIIFIGQYINSQVAQRVISQ 421
           CH     + ++ ++  NPP+MPA+MTPGGPLDL++VL  NRIIFIGQ +NSQVAQRVISQ
Sbjct: 61  CHSASRYDAVIEAKRGNPPMMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSQVAQRVISQ 120

Query: 422 LVTLSAVDEKADILIYLNCPGGSLYSILAIYDCMSWIKPKVGTVCFGVVASQAAIILSGG 601
           LVTL+ +DE++DIL+YLNCPGGS YSILAIYDCMSWIKPKVGTVCFGV ASQ A++L+GG
Sbjct: 121 LVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGALLLAGG 180

Query: 602 EKGMRYAMPNARVMIHQPQGGSEGNVEEVRRQVGETIYARDKVDKMFAAFTGQPLDIVQQ 781
           EKGMRY MPNAR+MIHQPQ G  G+VE+VRRQV E + +R K+D+M+AAFTGQ L+ VQ+
Sbjct: 181 EKGMRYTMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDQMYAAFTGQTLEKVQE 240

Query: 782 WTERDRFMSSSEAMDFGLVDALLETRY 862
           +TERDRF S+SEA++FGLVD +LET Y
Sbjct: 241 YTERDRFFSASEALEFGLVDGVLETEY 267


>ref|NP_563893.1| CLPP6 (Clp protease proteolytic subunit 6); endopeptidase Clp
           [Arabidopsis thaliana]
 sp|Q9SAA2|CLPP6_ARATH ATP-dependent Clp protease proteolytic subunit 6, chloroplast
           precursor (Endopeptidase ClpP6) (nClpP6) (nClpP1)
 gb|AAD30248.1|AC007296_9 Identical to gb|AF016621 ATP-dependent Clp protease proteolytic
           subunit from Arabidopsis thaliana and is a member of the
           PF|00574 CLP_protease family.  ESTs gb|F13836 and
           gb|F13997 come from this gene
 gb|AAK15551.1|AF348580_1 putative ATP-dependent Clp protease proteolytic subunit ClpP6
           [Arabidopsis thaliana]
 gb|AAM64804.1| ATP-dependent Clp protease proteolytic subunit (ClpP6) [Arabidopsis
           thaliana]
 dbj|BAF00932.1| putative ATP-dependent Clp protease proteolytic subunit
           [Arabidopsis thaliana]
          Length = 271

 Score =  309 bits (791), Expect = 3e-82
 Identities = 145/198 (73%), Positives = 177/198 (89%)
 Frame = +2

Query: 269 IVASENENPPLMPAIMTPGGPLDLATVLLGNRIIFIGQYINSQVAQRVISQLVTLSAVDE 448
           ++ ++  NPP+MP++MTPGGPLDL++VL  NRIIFIGQ IN+QVAQRVISQLVTL+++D+
Sbjct: 74  VIEAKKGNPPVMPSVMTPGGPLDLSSVLFRNRIIFIGQPINAQVAQRVISQLVTLASIDD 133

Query: 449 KADILIYLNCPGGSLYSILAIYDCMSWIKPKVGTVCFGVVASQAAIILSGGEKGMRYAMP 628
           K+DIL+YLNCPGGS YS+LAIYDCMSWIKPKVGTV FGV ASQ A++L+GGEKGMRYAMP
Sbjct: 134 KSDILMYLNCPGGSTYSVLAIYDCMSWIKPKVGTVAFGVAASQGALLLAGGEKGMRYAMP 193

Query: 629 NARVMIHQPQGGSEGNVEEVRRQVGETIYARDKVDKMFAAFTGQPLDIVQQWTERDRFMS 808
           N RVMIHQPQ G  G+VE+VRRQV E I AR K+D+M+AAFTGQPL+ VQQ+TERDRF+S
Sbjct: 194 NTRVMIHQPQTGCGGHVEDVRRQVNEAIEARQKIDRMYAAFTGQPLEKVQQYTERDRFLS 253

Query: 809 SSEAMDFGLVDALLETRY 862
           +SEA++FGL+D LLET Y
Sbjct: 254 ASEALEFGLIDGLLETEY 271