BLASTX 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf052c10 (1230 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 5,815,196 sequences; 2,006,227,497 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001060047.1| Os07g0570700 [Oryza sativa (japonica cultiva... 362 e-115 gb|EAZ04403.1| hypothetical protein OsI_025635 [Oryza sativa (in... 362 e-105 gb|ABK96574.1| unknown [Populus trichocarpa x Populus deltoides] 308 5e-82 sp|P82231|RRFC_SPIOL Ribosome recycling factor, chloroplast prec... 307 1e-81 ref|NP_567141.1| ribosome recycling factor, chloroplast, putativ... 290 1e-76 >ref|NP_001060047.1| Os07g0570700 [Oryza sativa (japonica cultivar-group)] sp|A2YMU2|RRFC_ORYSI Ribosome recycling factor, chloroplast precursor (Ribosome-releasing factor, chloroplast) (Protein OsL8) sp|A3BLC3|RRFC_ORYSJ Ribosome recycling factor, chloroplast precursor (Ribosome-releasing factor, chloroplast) (Protein OsL8) dbj|BAC84660.1| putative Ribosome recycling factor, chloroplast precursor [Oryza sativa (japonica cultivar-group)] dbj|BAF21961.1| Os07g0570700 [Oryza sativa (japonica cultivar-group)] Length = 266 Score = 362 bits (930), Expect(2) = e-115 Identities = 188/197 (95%), Positives = 191/197 (96%) Frame = +2 Query: 278 VLMHATIEEIEAEKSVIEDQAKERMEKAIETVQNNFNTVRTGRANPSMLDRIEVEYYGTP 457 VL HATIEEIEAEKSVIEDQA+ERMEKAIETVQNNFNTVRTGRANP+MLDRIEVEYYGTP Sbjct: 70 VLRHATIEEIEAEKSVIEDQARERMEKAIETVQNNFNTVRTGRANPAMLDRIEVEYYGTP 129 Query: 458 VNLKSIAQINTPDATSLLIQPYDKSCLKLIEKAIVAANLGVTPSNDGEVIRITVPPLTSD 637 VNLKSIAQINTPDATSLLIQPYDKS LKLIEK IVAANLGVTPSNDGEVIR+TVPPLTSD Sbjct: 130 VNLKSIAQINTPDATSLLIQPYDKSSLKLIEKTIVAANLGVTPSNDGEVIRVTVPPLTSD 189 Query: 638 RRKELTKTVGKLAEEGKVTIRNIRRDAIKAYDKLEKEKKLSEDNVKDLSADLQKVTDEYM 817 RRKEL KTV KLAEEGKV IRNIRRDAIKAYDKLEKEKKLSEDNVKDLSADLQKVTDEYM Sbjct: 190 RRKELAKTVAKLAEEGKVAIRNIRRDAIKAYDKLEKEKKLSEDNVKDLSADLQKVTDEYM 249 Query: 818 KKIEAIQKQKEQELMKI 868 KKIEAIQKQKEQELMKI Sbjct: 250 KKIEAIQKQKEQELMKI 266 Score = 76.3 bits (186), Expect(2) = e-115 Identities = 42/66 (63%), Positives = 51/66 (77%), Gaps = 1/66 (1%) Frame = +1 Query: 82 LHAVSPAAAASPPRALSSARLPLQRPGCGCLSKRPTLLSSST-IMKLHAGTVGFFSMPLV 258 LHAVSPAAAA+PPRALSSA QRP GC+ +RP +LSSST M L AG + F+S PL+ Sbjct: 4 LHAVSPAAAAAPPRALSSAARVPQRP--GCVPERPNILSSSTNFMSLRAGPMRFYSRPLI 61 Query: 259 LRHSDK 276 L++SDK Sbjct: 62 LQNSDK 67 >gb|EAZ04403.1| hypothetical protein OsI_025635 [Oryza sativa (indica cultivar-group)] gb|EAZ40362.1| hypothetical protein OsJ_023845 [Oryza sativa (japonica cultivar-group)] Length = 251 Score = 362 bits (930), Expect(2) = e-105 Identities = 188/197 (95%), Positives = 191/197 (96%) Frame = +2 Query: 278 VLMHATIEEIEAEKSVIEDQAKERMEKAIETVQNNFNTVRTGRANPSMLDRIEVEYYGTP 457 VL HATIEEIEAEKSVIEDQA+ERMEKAIETVQNNFNTVRTGRANP+MLDRIEVEYYGTP Sbjct: 55 VLRHATIEEIEAEKSVIEDQARERMEKAIETVQNNFNTVRTGRANPAMLDRIEVEYYGTP 114 Query: 458 VNLKSIAQINTPDATSLLIQPYDKSCLKLIEKAIVAANLGVTPSNDGEVIRITVPPLTSD 637 VNLKSIAQINTPDATSLLIQPYDKS LKLIEK IVAANLGVTPSNDGEVIR+TVPPLTSD Sbjct: 115 VNLKSIAQINTPDATSLLIQPYDKSSLKLIEKTIVAANLGVTPSNDGEVIRVTVPPLTSD 174 Query: 638 RRKELTKTVGKLAEEGKVTIRNIRRDAIKAYDKLEKEKKLSEDNVKDLSADLQKVTDEYM 817 RRKEL KTV KLAEEGKV IRNIRRDAIKAYDKLEKEKKLSEDNVKDLSADLQKVTDEYM Sbjct: 175 RRKELAKTVAKLAEEGKVAIRNIRRDAIKAYDKLEKEKKLSEDNVKDLSADLQKVTDEYM 234 Query: 818 KKIEAIQKQKEQELMKI 868 KKIEAIQKQKEQELMKI Sbjct: 235 KKIEAIQKQKEQELMKI 251 Score = 43.9 bits (102), Expect(2) = e-105 Identities = 22/27 (81%), Positives = 23/27 (85%) Frame = +1 Query: 82 LHAVSPAAAASPPRALSSARLPLQRPG 162 LHAVSPAAAA+PPRALSSA QRPG Sbjct: 4 LHAVSPAAAAAPPRALSSAARVPQRPG 30 >gb|ABK96574.1| unknown [Populus trichocarpa x Populus deltoides] Length = 286 Score = 308 bits (789), Expect = 5e-82 Identities = 172/285 (60%), Positives = 214/285 (75%), Gaps = 18/285 (6%) Frame = +2 Query: 68 AAPWRSTPSPPRRRPPHRA-PSPPPA----------SPCSAQVVVVSQSAQPC*APQQS* 214 AAP+ S +PP R + P+PP A P A+V S A S Sbjct: 2 AAPFSSPTTPPPLRSIFQPNPNPPKALLSLTGSFHRGPHRAKVGYNSIGAASVSLWSSSA 61 Query: 215 NFTLEQWAS-------LACLWFFDTQTRVLMHATIEEIEAEKSVIEDQAKERMEKAIETV 373 N++ + S +A + V+ +ATIEEIEAEKS+IED AK RMEK I+T+ Sbjct: 62 NYSSLRNGSSKLSGKPVAVKRLLQNRRGVVRNATIEEIEAEKSLIEDDAKGRMEKTIDTM 121 Query: 374 QNNFNTVRTGRANPSMLDRIEVEYYGTPVNLKSIAQINTPDATSLLIQPYDKSCLKLIEK 553 + NFN+VRTGRANPSMLD+IEVEYYGTPV+LKSIAQI+TPDA+SLL+QPYDKS LK IEK Sbjct: 122 RTNFNSVRTGRANPSMLDKIEVEYYGTPVSLKSIAQISTPDASSLLVQPYDKSSLKAIEK 181 Query: 554 AIVAANLGVTPSNDGEVIRITVPPLTSDRRKELTKTVGKLAEEGKVTIRNIRRDAIKAYD 733 AIV+++LG+TP+NDGEVIR+++P LTS+RRKEL+K V KLAEEGKV +RNIRRDA+KAY+ Sbjct: 182 AIVSSDLGLTPNNDGEVIRMSIPQLTSERRKELSKMVAKLAEEGKVALRNIRRDALKAYE 241 Query: 734 KLEKEKKLSEDNVKDLSADLQKVTDEYMKKIEAIQKQKEQELMKI 868 KLEKEKKLSEDNVKDLS+DLQK+TDEYMKK++ I KQKE+EL+K+ Sbjct: 242 KLEKEKKLSEDNVKDLSSDLQKLTDEYMKKLDNIFKQKEKELLKV 286 >sp|P82231|RRFC_SPIOL Ribosome recycling factor, chloroplast precursor (Ribosome-releasing factor, chloroplast) (RRF) (CpFrr) (RRFHCP) emb|CAB41419.1| chloroplast ribosome recycling factor protein [Spinacia oleracea] Length = 271 Score = 307 bits (786), Expect = 1e-81 Identities = 151/193 (78%), Positives = 178/193 (92%) Frame = +2 Query: 290 ATIEEIEAEKSVIEDQAKERMEKAIETVQNNFNTVRTGRANPSMLDRIEVEYYGTPVNLK 469 AT+EE+EAEKS+IE K+RMEK IET+++NFN+VRT RA+P+MLDRIEVEYYGTPV+LK Sbjct: 79 ATMEEVEAEKSLIETNTKQRMEKTIETIRSNFNSVRTNRASPTMLDRIEVEYYGTPVSLK 138 Query: 470 SIAQINTPDATSLLIQPYDKSCLKLIEKAIVAANLGVTPSNDGEVIRITVPPLTSDRRKE 649 SIAQI+TPDA+SLLI PYDKS LK IEKAIV + LGV+P+NDGEVIR+++PPLTSDRRKE Sbjct: 139 SIAQISTPDASSLLISPYDKSSLKAIEKAIVTSQLGVSPNNDGEVIRLSLPPLTSDRRKE 198 Query: 650 LTKTVGKLAEEGKVTIRNIRRDAIKAYDKLEKEKKLSEDNVKDLSADLQKVTDEYMKKIE 829 L K V KLAEEGKV +RNIRRDA+K+Y+KLEKEKKLSEDNVKDLSADLQK+TDEYMKK+E Sbjct: 199 LAKVVSKLAEEGKVAVRNIRRDALKSYEKLEKEKKLSEDNVKDLSADLQKLTDEYMKKVE 258 Query: 830 AIQKQKEQELMKI 868 +I KQKEQELMK+ Sbjct: 259 SIYKQKEQELMKV 271 >ref|NP_567141.1| ribosome recycling factor, chloroplast, putative / ribosome releasing factor, chloroplast, putative [Arabidopsis thaliana] sp|Q9M1X0|RRFC_ARATH Ribosome recycling factor, chloroplast precursor (Ribosome-releasing factor, chloroplast) (RRF) (CpFrr) (RRFHCP) gb|AAK49599.1|AF372883_1 AT3g63190/F16M2_40 [Arabidopsis thaliana] gb|AAL09724.1| AT3g63190/F16M2_40 [Arabidopsis thaliana] gb|AAM12981.1| putative protein [Arabidopsis thaliana] gb|AAO11594.1| At3g63190/F16M2_40 [Arabidopsis thaliana] Length = 275 Score = 290 bits (743), Expect = 1e-76 Identities = 143/197 (72%), Positives = 175/197 (88%) Frame = +2 Query: 278 VLMHATIEEIEAEKSVIEDQAKERMEKAIETVQNNFNTVRTGRANPSMLDRIEVEYYGTP 457 V+ ATIEEIEAEKS IE K +MEK IET++ +FN++RTGR+N +MLD+IEVEYYG+P Sbjct: 79 VIRSATIEEIEAEKSAIETDVKSKMEKTIETLRTSFNSIRTGRSNAAMLDKIEVEYYGSP 138 Query: 458 VNLKSIAQINTPDATSLLIQPYDKSCLKLIEKAIVAANLGVTPSNDGEVIRITVPPLTSD 637 V+LKSIAQI+TPD +SLL+QPYDKS LK IEKAIV ++LGVTP+NDG+VIR+++PPLTSD Sbjct: 139 VSLKSIAQISTPDGSSLLLQPYDKSSLKAIEKAIVNSDLGVTPNNDGDVIRLSLPPLTSD 198 Query: 638 RRKELTKTVGKLAEEGKVTIRNIRRDAIKAYDKLEKEKKLSEDNVKDLSADLQKVTDEYM 817 RRKEL+K V K +EEGKV +RNIRRDA+K+YDKLEKEKKLSEDNVKDLS+DLQK+ D YM Sbjct: 199 RRKELSKVVAKQSEEGKVALRNIRRDALKSYDKLEKEKKLSEDNVKDLSSDLQKLIDVYM 258 Query: 818 KKIEAIQKQKEQELMKI 868 KKIE + KQKE+ELMK+ Sbjct: 259 KKIEELYKQKEKELMKV 275