BLASTX 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf047f18 (1428 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 5,815,196 sequences; 2,006,227,497 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001067296.1| Os12g0620400 [Oryza sativa (japonica cultiva... 388 e-106 gb|ABG22088.1| Methyl-CpG binding domain containing protein, exp... 373 e-101 gb|EAY83934.1| hypothetical protein OsI_037893 [Oryza sativa (in... 353 2e-95 ref|NP_001105174.1| methyl binding domain [Zea mays] >gi|1393630... 298 8e-79 ref|NP_001105175.1| methyl binding domain [Zea mays] >gi|1393631... 291 8e-77 >ref|NP_001067296.1| Os12g0620400 [Oryza sativa (japonica cultivar-group)] gb|ABA99897.1| Methyl-CpG binding domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] dbj|BAF30315.1| Os12g0620400 [Oryza sativa (japonica cultivar-group)] Length = 303 Score = 388 bits (996), Expect = e-106 Identities = 222/348 (63%), Positives = 240/348 (68%), Gaps = 4/348 (1%) Frame = +1 Query: 103 SGKRKLETTTMATGGEQT-AAAEEVVSVEMPAPQGWTKKFTPQRVGRSEIVFVSPTGEEI 279 +G + + A E T AAA+EVVSVEMPAP+GWTKKFTPQR GR EIVFVSPTGEEI Sbjct: 4 AGDEQQQQAAAAQTAEVTEAAAKEVVSVEMPAPEGWTKKFTPQRGGRFEIVFVSPTGEEI 63 Query: 280 KNKRQLNQYLKAHPGGPASSEFDWGTGDTPRRSARISEKVKAFDSPEGEKIPKRSRNSTG 459 KNKRQL+QYLKAHPGGPASSEFDWGTGDTPRRSARISEKVKAFDSPEGEKIPKRSRNS+G Sbjct: 64 KNKRQLSQYLKAHPGGPASSEFDWGTGDTPRRSARISEKVKAFDSPEGEKIPKRSRNSSG 123 Query: 460 RKGKQEVKEAPEAEEAKDTETGEEAPEAEEAKDTETGEEAKEAPEAEEAKDTETGEEVKE 639 RKGKQE KEA E EEAKD E +EAP + K+T+ +T+ EE KE Sbjct: 124 RKGKQEKKEATENEEAKDAEADKEAPSEDAPKETDV--------------ETKPAEEAKE 169 Query: 640 APSEDAAKGTDVEMKAAEEAPAEDAEKTADKADAPAPAPVEDKKEDGKPAESDVAPPAPS 819 APSEDA K TDVEMK AEDA KTAD AD PAPAP +KED KPAES+ APPAPS Sbjct: 170 APSEDAPKDTDVEMKT-----AEDASKTAD-ADTPAPAPAGTEKEDAKPAESEAAPPAPS 223 Query: 820 EGEKKEEVAPPAPSDGEKKEEVAPPAPSEGEKKEEVAPPASNPTENSVAAAAADPASETK 999 EG GEKKE+ P P E A P SNPTE S AAA Sbjct: 224 EG-------------GEKKEDAKPAEP------EAAAAPPSNPTEPSAPKAAA------- 257 Query: 1000 ADAAPVENSADKGAHQDSQPTGA---TKESSAVSNGQVPPGASTVKCT 1134 AAPVENSADKG HQDSQP A KESS V+NGQ+P GAS VKCT Sbjct: 258 --AAPVENSADKGPHQDSQPPSAAAPAKESSPVNNGQLPAGASAVKCT 303 >gb|ABG22088.1| Methyl-CpG binding domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] Length = 299 Score = 373 bits (958), Expect = e-101 Identities = 218/348 (62%), Positives = 236/348 (67%), Gaps = 4/348 (1%) Frame = +1 Query: 103 SGKRKLETTTMATGGEQT-AAAEEVVSVEMPAPQGWTKKFTPQRVGRSEIVFVSPTGEEI 279 +G + + A E T AAA+EVVSVEMPAP+GWTKK R GR EIVFVSPTGEEI Sbjct: 4 AGDEQQQQAAAAQTAEVTEAAAKEVVSVEMPAPEGWTKK----RGGRFEIVFVSPTGEEI 59 Query: 280 KNKRQLNQYLKAHPGGPASSEFDWGTGDTPRRSARISEKVKAFDSPEGEKIPKRSRNSTG 459 KNKRQL+QYLKAHPGGPASSEFDWGTGDTPRRSARISEKVKAFDSPEGEKIPKRSRNS+G Sbjct: 60 KNKRQLSQYLKAHPGGPASSEFDWGTGDTPRRSARISEKVKAFDSPEGEKIPKRSRNSSG 119 Query: 460 RKGKQEVKEAPEAEEAKDTETGEEAPEAEEAKDTETGEEAKEAPEAEEAKDTETGEEVKE 639 RKGKQE KEA E EEAKD E +EAP + K+T+ +T+ EE KE Sbjct: 120 RKGKQEKKEATENEEAKDAEADKEAPSEDAPKETDV--------------ETKPAEEAKE 165 Query: 640 APSEDAAKGTDVEMKAAEEAPAEDAEKTADKADAPAPAPVEDKKEDGKPAESDVAPPAPS 819 APSEDA K TDVEMK AEDA KTAD AD PAPAP +KED KPAES+ APPAPS Sbjct: 166 APSEDAPKDTDVEMKT-----AEDASKTAD-ADTPAPAPAGTEKEDAKPAESEAAPPAPS 219 Query: 820 EGEKKEEVAPPAPSDGEKKEEVAPPAPSEGEKKEEVAPPASNPTENSVAAAAADPASETK 999 EG GEKKE+ P P E A P SNPTE S AAA Sbjct: 220 EG-------------GEKKEDAKPAEP------EAAAAPPSNPTEPSAPKAAA------- 253 Query: 1000 ADAAPVENSADKGAHQDSQPTGA---TKESSAVSNGQVPPGASTVKCT 1134 AAPVENSADKG HQDSQP A KESS V+NGQ+P GAS VKCT Sbjct: 254 --AAPVENSADKGPHQDSQPPSAAAPAKESSPVNNGQLPAGASAVKCT 299 >gb|EAY83934.1| hypothetical protein OsI_037893 [Oryza sativa (indica cultivar-group)] gb|EAZ21252.1| hypothetical protein OsJ_035461 [Oryza sativa (japonica cultivar-group)] Length = 313 Score = 353 bits (906), Expect = 2e-95 Identities = 203/321 (63%), Positives = 218/321 (67%), Gaps = 3/321 (0%) Frame = +1 Query: 181 VEMPAPQGWTKKFTPQRVGRSEIVFVSPTGEEIKNKRQLNQYLKAHPGGPASSEFDWGTG 360 V+ P + K FTPQR GR EIVFVSPTGEEIKNKRQL+QYLKAHPGGPASSEFDWGTG Sbjct: 41 VKCPLKVPFLKLFTPQRGGRFEIVFVSPTGEEIKNKRQLSQYLKAHPGGPASSEFDWGTG 100 Query: 361 DTPRRSARISEKVKAFDSPEGEKIPKRSRNSTGRKGKQEVKEAPEAEEAKDTETGEEAPE 540 DTPRRSARISEKVKAFDSPEGEKIPKRSRNS+GRKGKQE KEA E EEAKD E +EAP Sbjct: 101 DTPRRSARISEKVKAFDSPEGEKIPKRSRNSSGRKGKQEKKEATENEEAKDAEADKEAPS 160 Query: 541 AEEAKDTETGEEAKEAPEAEEAKDTETGEEVKEAPSEDAAKGTDVEMKAAEEAPAEDAEK 720 + K+T+ +T+ EE KEAPSEDA K TDVEMK AEDA K Sbjct: 161 EDAPKETDV--------------ETKPAEEAKEAPSEDAPKDTDVEMKT-----AEDASK 201 Query: 721 TADKADAPAPAPVEDKKEDGKPAESDVAPPAPSEGEKKEEVAPPAPSDGEKKEEVAPPAP 900 TAD AD PAPAP +KED KPAES+ APPAPSEG GEKKE+ P P Sbjct: 202 TAD-ADTPAPAPAGTEKEDAKPAESEAAPPAPSEG-------------GEKKEDAKPAEP 247 Query: 901 SEGEKKEEVAPPASNPTENSVAAAAADPASETKADAAPVENSADKGAHQDSQPTGA---T 1071 E A P SNPTE S AAA AAPVENSADKG HQDSQP A Sbjct: 248 ------EAAAAPPSNPTEPSAPKAAA---------AAPVENSADKGPHQDSQPPSAAAPA 292 Query: 1072 KESSAVSNGQVPPGASTVKCT 1134 KESS V+NGQ+P GAS VKCT Sbjct: 293 KESSPVNNGQLPAGASAVKCT 313 >ref|NP_001105174.1| methyl binding domain [Zea mays] gb|AAK40307.1| putative methyl-binding domain protein MBD105 [Zea mays] Length = 433 Score = 298 bits (762), Expect = 8e-79 Identities = 170/283 (60%), Positives = 189/283 (66%), Gaps = 2/283 (0%) Frame = +1 Query: 187 MPAPQGWTKKFTPQRVGRSEIVFVSPTGEEIKNKRQLNQYLKAHPGGPASSEFDWGTGDT 366 MPAP GWTKKFTP R GRSEIVFVSPTGEEIKNKRQL+QYLKAHPGGPA SEFDWGTGDT Sbjct: 1 MPAPDGWTKKFTPLRGGRSEIVFVSPTGEEIKNKRQLSQYLKAHPGGPAVSEFDWGTGDT 60 Query: 367 PRRSARISEKVKAFDSPEGEKIPKRSRNSTGRKGKQEVKEAPEAEEAKDTETGEEAPEAE 546 PRRSARISEKVK FDSPEGEKIPKRSRNS+GRKGKQ KE PE EEAKD ETG+EA E Sbjct: 61 PRRSARISEKVKVFDSPEGEKIPKRSRNSSGRKGKQGKKETPETEEAKDAETGKEAEE-- 118 Query: 547 EAKDTETGEEAKEAPEAEEAKDTETGEEVKEAPSEDAAKGTDVEMKAAEEAPAEDAE-KT 723 APSEDAAK TDVEMK AEE AE + Sbjct: 119 -------------------------------APSEDAAKETDVEMKPAEEVKGASAETED 147 Query: 724 ADKADAPAPAPV-EDKKEDGKPAESDVAPPAPSEGEKKEEVAPPAPSDGEKKEEVAPPAP 900 AD ADAPAPAP+ EDKK+ + AE+ APP PSE +K + A P + E+ A PAP Sbjct: 148 ADMADAPAPAPMEEDKKQTEELAEAIAAPPVPSEEKKDVKPAEPEAAASNPTEDSA-PAP 206 Query: 901 SEGEKKEEVAPPASNPTENSVAAAAADPASETKADAAPVENSA 1029 +E +VA PA+ P ++ AA A P ETK+DA P +A Sbjct: 207 AE---PADVAAPAAEPKSDAKPAAVAAPVPETKSDAEPAAVAA 246 >ref|NP_001105175.1| methyl binding domain [Zea mays] gb|AAK40308.1| putative methyl-binding domain protein MBD106 [Zea mays] Length = 428 Score = 291 bits (745), Expect = 8e-77 Identities = 176/325 (54%), Positives = 205/325 (63%), Gaps = 13/325 (4%) Frame = +1 Query: 187 MPAPQGWTKKFTPQRVGRSEIVFVSPTGEEIKNKRQLNQYLKAHPGGPASSEFDWGTGDT 366 MPAP GWTKKFTPQR GRSEIVFVSPTGEEIKNKRQL+QYLKAHPGGPA+S+FDWGTGDT Sbjct: 1 MPAPDGWTKKFTPQRGGRSEIVFVSPTGEEIKNKRQLSQYLKAHPGGPAASDFDWGTGDT 60 Query: 367 PRRSARISEKVKAFDSPEGEKIPKRSRNSTGRKGKQEVKEAPEAEEAKDTETGEEAPEAE 546 PRRSARISEKVK FDSPEGEKIPKRSRNS+GRKG+Q KEAPE EEAKD ETG++AP + Sbjct: 61 PRRSARISEKVKVFDSPEGEKIPKRSRNSSGRKGRQGKKEAPETEEAKDAETGQDAPSED 120 Query: 547 EAKDTETGEEAKEAPEAEEAKDTETGEEVKEAPSEDAAKGTDVEMKAAEEAPAEDAEKTA 726 K+T+ + + EE KEAP+E +DAEK A Sbjct: 121 GTKETDV--------------EMKPAEEAKEAPTE-----------------TDDAEKAA 149 Query: 727 DKA-DAPAPAPV-EDKKEDGKPAESDVAPPAPSEGEKKEEVAPP-----APSDGEKKEEV 885 DKA D PAPAP+ ED+KE KPAE+ VAP A SE EKKE+ P AP+ E Sbjct: 150 DKADDTPAPAPMEEDEKETEKPAEAVVAPLAQSE-EKKEDAKPDEPEAVAPAPVSNPTEN 208 Query: 886 APPAPSEGEKKEEVAPPASNPTENSVA--AAAADPASETKADAAPVENSADKGAHQ-DSQ 1056 + PAP+ E A PA P SVA AA PA ETK DA P A ++ D++ Sbjct: 209 SAPAPA-----EPAAVPAPVPETESVAEPAAVLAPAPETKPDAKPAAVPAPAPENKPDAE 263 Query: 1057 PTGA---TKESSAVSNGQVPPGAST 1122 P A ++ +V+ P T Sbjct: 264 PAAAAAPVPDTKSVAEPAAAPAPDT 288