BLASTX 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf046n22 (1684 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 5,815,196 sequences; 2,006,227,497 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001043297.1| Os01g0549700 [Oryza sativa (japonica cultiva... 769 0.0 sp|Q0JM17|RH56_ORYSJ DEAD-box ATP-dependent RNA helicase 56 >gi|... 769 0.0 ref|NP_001043298.1| Os01g0550000 [Oryza sativa (japonica cultiva... 768 0.0 gb|EDQ64969.1| predicted protein [Physcomitrella patens subsp. p... 755 0.0 gb|ABK93079.1| unknown [Populus trichocarpa] 748 0.0 >ref|NP_001043297.1| Os01g0549700 [Oryza sativa (japonica cultivar-group)] dbj|BAF05211.1| Os01g0549700 [Oryza sativa (japonica cultivar-group)] Length = 495 Score = 769 bits (1985), Expect = 0.0 Identities = 386/428 (90%), Positives = 400/428 (93%), Gaps = 1/428 (0%) Frame = +1 Query: 178 EAKENDVXXXXXXXXXXXXXXKTVDGS-AAKATGEVAKKGYVGIHSSGFRDFLLKPELLR 354 E K+N+V T G+ AA A+ +V KKGYVGIHSSGFRDFLLKPELLR Sbjct: 68 EVKDNEVYEEDLVDYEEEVENGTDGGANAANASADVVKKGYVGIHSSGFRDFLLKPELLR 127 Query: 355 AIQDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLSSLQQIDPVTGQVAALV 534 AIQDCGFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVLSSLQQIDPV GQV ALV Sbjct: 128 AIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVAGQVGALV 187 Query: 535 LCHTRELAYQICHEFERFSKYLTEIKVAVFYGGVNIRKHKDLLKNECPHIVVGTPGRILA 714 LCHTRELAYQICHEFERFSKYL E+KVAVFYGGV+I+KHKDLLKN+CPHIVVGTPGRILA Sbjct: 188 LCHTRELAYQICHEFERFSKYLPEVKVAVFYGGVHIKKHKDLLKNDCPHIVVGTPGRILA 247 Query: 715 LGRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 894 L R+KDLSLKNVRHFILDECDKML+SLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV Sbjct: 248 LAREKDLSLKNVRHFILDECDKMLDSLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 307 Query: 895 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEAEKNRKLNDLLDALDFNQVVIFVKSVS 1074 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEAEKNRKLNDLLDALDFNQVVIFVKSVS Sbjct: 308 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEAEKNRKLNDLLDALDFNQVVIFVKSVS 367 Query: 1075 RAAELNKLLCECNFPSICIHSGMTQEERLTRYKNFKEGHKRILAATDLVGRGIDIERVNI 1254 RAAELNKLLCECNFP+I IHSGMTQEERLTRYKNFKEGHKRIL ATDLVGRGIDIERVNI Sbjct: 368 RAAELNKLLCECNFPAISIHSGMTQEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNI 427 Query: 1255 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQI 1434 VINYDMPDSAD+YLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQI Sbjct: 428 VINYDMPDSADSYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQI 487 Query: 1435 DTSTYMPS 1458 DTSTYMPS Sbjct: 488 DTSTYMPS 495 >sp|Q0JM17|RH56_ORYSJ DEAD-box ATP-dependent RNA helicase 56 dbj|BAD88053.1| putative HLA-B associated transcript 1 [Oryza sativa (japonica cultivar-group)] Length = 432 Score = 769 bits (1985), Expect = 0.0 Identities = 386/428 (90%), Positives = 400/428 (93%), Gaps = 1/428 (0%) Frame = +1 Query: 178 EAKENDVXXXXXXXXXXXXXXKTVDGS-AAKATGEVAKKGYVGIHSSGFRDFLLKPELLR 354 E K+N+V T G+ AA A+ +V KKGYVGIHSSGFRDFLLKPELLR Sbjct: 5 EVKDNEVYEEDLVDYEEEVENGTDGGANAANASADVVKKGYVGIHSSGFRDFLLKPELLR 64 Query: 355 AIQDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLSSLQQIDPVTGQVAALV 534 AIQDCGFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVLSSLQQIDPV GQV ALV Sbjct: 65 AIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVAGQVGALV 124 Query: 535 LCHTRELAYQICHEFERFSKYLTEIKVAVFYGGVNIRKHKDLLKNECPHIVVGTPGRILA 714 LCHTRELAYQICHEFERFSKYL E+KVAVFYGGV+I+KHKDLLKN+CPHIVVGTPGRILA Sbjct: 125 LCHTRELAYQICHEFERFSKYLPEVKVAVFYGGVHIKKHKDLLKNDCPHIVVGTPGRILA 184 Query: 715 LGRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 894 L R+KDLSLKNVRHFILDECDKML+SLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV Sbjct: 185 LAREKDLSLKNVRHFILDECDKMLDSLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 244 Query: 895 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEAEKNRKLNDLLDALDFNQVVIFVKSVS 1074 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEAEKNRKLNDLLDALDFNQVVIFVKSVS Sbjct: 245 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEAEKNRKLNDLLDALDFNQVVIFVKSVS 304 Query: 1075 RAAELNKLLCECNFPSICIHSGMTQEERLTRYKNFKEGHKRILAATDLVGRGIDIERVNI 1254 RAAELNKLLCECNFP+I IHSGMTQEERLTRYKNFKEGHKRIL ATDLVGRGIDIERVNI Sbjct: 305 RAAELNKLLCECNFPAISIHSGMTQEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNI 364 Query: 1255 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQI 1434 VINYDMPDSAD+YLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQI Sbjct: 365 VINYDMPDSADSYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQI 424 Query: 1435 DTSTYMPS 1458 DTSTYMPS Sbjct: 425 DTSTYMPS 432 >ref|NP_001043298.1| Os01g0550000 [Oryza sativa (japonica cultivar-group)] sp|Q5JK84|RH15_ORYSJ DEAD-box ATP-dependent RNA helicase 15 dbj|BAD88055.1| putative HLA-B associated transcript 1 [Oryza sativa (japonica cultivar-group)] dbj|BAD88115.1| putative HLA-B associated transcript 1 [Oryza sativa (japonica cultivar-group)] dbj|BAF05212.1| Os01g0550000 [Oryza sativa (japonica cultivar-group)] Length = 432 Score = 768 bits (1982), Expect = 0.0 Identities = 380/401 (94%), Positives = 392/401 (97%) Frame = +1 Query: 256 SAAKATGEVAKKGYVGIHSSGFRDFLLKPELLRAIQDCGFEHPSEVQHECIPQAILGMDV 435 +AA A+ +V KKGYVGIHSSGFRDFLLKPELLRAIQDCGFEHPSEVQHECIPQAILGMDV Sbjct: 32 AAANASADVVKKGYVGIHSSGFRDFLLKPELLRAIQDCGFEHPSEVQHECIPQAILGMDV 91 Query: 436 LCQAKSGMGKTAVFVLSSLQQIDPVTGQVAALVLCHTRELAYQICHEFERFSKYLTEIKV 615 +CQAKSGMGKTAVFVLSSLQQIDPV GQV ALVLCHTRELAYQICHEFERFSKYL E+KV Sbjct: 92 ICQAKSGMGKTAVFVLSSLQQIDPVAGQVGALVLCHTRELAYQICHEFERFSKYLPEVKV 151 Query: 616 AVFYGGVNIRKHKDLLKNECPHIVVGTPGRILALGRDKDLSLKNVRHFILDECDKMLESL 795 AVFYGGV+I+KHKDLLKN+CPHIVVGTPGRILAL R+KDLSLKNVRHFILDECDKML+SL Sbjct: 152 AVFYGGVHIKKHKDLLKNDCPHIVVGTPGRILALAREKDLSLKNVRHFILDECDKMLDSL 211 Query: 796 DMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQH 975 DMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQH Sbjct: 212 DMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQH 271 Query: 976 YIKLSEAEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLCECNFPSICIHSGMTQEE 1155 YIKLSEAEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLCECNFP+I IHSGMTQEE Sbjct: 272 YIKLSEAEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLCECNFPAISIHSGMTQEE 331 Query: 1156 RLTRYKNFKEGHKRILAATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKG 1335 RLTRYKNFKEGHKRIL ATDLVGRGIDIERVNIVINYDMPDSAD+YLHRVGRAGRFGTKG Sbjct: 332 RLTRYKNFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADSYLHRVGRAGRFGTKG 391 Query: 1336 LAITFVSSASDSDVLNQVQERFEVDIKELPEQIDTSTYMPS 1458 LAITFVSSASDSDVLNQVQERFEVDIKELPEQIDTSTYMPS Sbjct: 392 LAITFVSSASDSDVLNQVQERFEVDIKELPEQIDTSTYMPS 432 >gb|EDQ64969.1| predicted protein [Physcomitrella patens subsp. patens] Length = 425 Score = 755 bits (1949), Expect = 0.0 Identities = 374/403 (92%), Positives = 385/403 (95%) Frame = +1 Query: 250 DGSAAKATGEVAKKGYVGIHSSGFRDFLLKPELLRAIQDCGFEHPSEVQHECIPQAILGM 429 D AAK GE KKGYVGIHSSGFRDFLLKPELLRAI DCGFEHPSEVQHECIPQAILGM Sbjct: 23 DAVAAKTNGETVKKGYVGIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGM 82 Query: 430 DVLCQAKSGMGKTAVFVLSSLQQIDPVTGQVAALVLCHTRELAYQICHEFERFSKYLTEI 609 DV+CQAKSGMGKTAVFVLS+LQQI+PVTGQVAALVLCHTRELAYQICHEFERFS YL +I Sbjct: 83 DVICQAKSGMGKTAVFVLSTLQQIEPVTGQVAALVLCHTRELAYQICHEFERFSTYLPDI 142 Query: 610 KVAVFYGGVNIRKHKDLLKNECPHIVVGTPGRILALGRDKDLSLKNVRHFILDECDKMLE 789 KVAVFYGGVNI+ HKDLLKNECPHIVVGTPGRIL L RDKDLSLK+VRHFILDECDKMLE Sbjct: 143 KVAVFYGGVNIKTHKDLLKNECPHIVVGTPGRILGLARDKDLSLKSVRHFILDECDKMLE 202 Query: 790 SLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLV 969 SLDMRRDVQEIFK+TPHDKQVMMFSATLSKEIRPVCK+FMQDPMEIYVDDEAKLTLHGLV Sbjct: 203 SLDMRRDVQEIFKLTPHDKQVMMFSATLSKEIRPVCKRFMQDPMEIYVDDEAKLTLHGLV 262 Query: 970 QHYIKLSEAEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLCECNFPSICIHSGMTQ 1149 QHYIKL E EKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLL ECNFPSICIHSGM+Q Sbjct: 263 QHYIKLGEVEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQ 322 Query: 1150 EERLTRYKNFKEGHKRILAATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGT 1329 EERLTRYK FKEGHKRIL ATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGT Sbjct: 323 EERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGT 382 Query: 1330 KGLAITFVSSASDSDVLNQVQERFEVDIKELPEQIDTSTYMPS 1458 KGLAITFV+S SDSDVLNQVQERFEVDIKELPEQIDT+TYMPS Sbjct: 383 KGLAITFVASPSDSDVLNQVQERFEVDIKELPEQIDTTTYMPS 425 >gb|ABK93079.1| unknown [Populus trichocarpa] Length = 428 Score = 748 bits (1932), Expect = 0.0 Identities = 377/429 (87%), Positives = 389/429 (90%) Frame = +1 Query: 172 MGEAKENDVXXXXXXXXXXXXXXKTVDGSAAKATGEVAKKGYVGIHSSGFRDFLLKPELL 351 MGE ++ND K D AK GE KKGYVGIHSSGFRDFLLKPELL Sbjct: 1 MGETRDNDTYEEELLDYEEEDE-KAPDSVGAKVNGEAVKKGYVGIHSSGFRDFLLKPELL 59 Query: 352 RAIQDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLSSLQQIDPVTGQVAAL 531 R+I D GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVLS+LQQI+P +GQV AL Sbjct: 60 RSIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPTSGQVIAL 119 Query: 532 VLCHTRELAYQICHEFERFSKYLTEIKVAVFYGGVNIRKHKDLLKNECPHIVVGTPGRIL 711 VLCHTRELAYQICHEFERFS YL + KVAVFYGGVNI+ HKDLLKNECPHIVVGTPGRIL Sbjct: 120 VLCHTRELAYQICHEFERFSTYLPDTKVAVFYGGVNIKTHKDLLKNECPHIVVGTPGRIL 179 Query: 712 ALGRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRP 891 AL RDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRP Sbjct: 180 ALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRP 239 Query: 892 VCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEAEKNRKLNDLLDALDFNQVVIFVKSV 1071 VCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL+E EKNRKLNDLL ALDFNQVVIFVKSV Sbjct: 240 VCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLTELEKNRKLNDLLGALDFNQVVIFVKSV 299 Query: 1072 SRAAELNKLLCECNFPSICIHSGMTQEERLTRYKNFKEGHKRILAATDLVGRGIDIERVN 1251 SRAAELNKLL ECNFPSICIHSGM+QEERL RYK FKEGHKRIL ATDLVGRGIDIERV+ Sbjct: 300 SRAAELNKLLVECNFPSICIHSGMSQEERLMRYKGFKEGHKRILVATDLVGRGIDIERVD 359 Query: 1252 IVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQ 1431 IVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQ Sbjct: 360 IVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQ 419 Query: 1432 IDTSTYMPS 1458 IDTSTYMPS Sbjct: 420 IDTSTYMPS 428