BLASTX 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf044c08 (1906 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 5,815,196 sequences; 2,006,227,497 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAB91997.1| putative DNA-damage repair protein DRT111 precur... 433 e-163 ref|NP_001043226.1| Os01g0526100 [Oryza sativa (japonica cultiva... 433 e-158 gb|EAY74353.1| hypothetical protein OsI_002200 [Oryza sativa (in... 380 e-147 ref|NP_174336.1| DRT111 (DNA-damage-repair/toleration protein 11... 320 e-123 gb|AAA73382.1| [Arabidopsis thaliana recombination and DNA-damag... 270 e-109 >dbj|BAB91997.1| putative DNA-damage repair protein DRT111 precursor [Oryza sativa (japonica cultivar-group)] dbj|BAC00713.1| putative DNA-damage repair protein DRT111 precursor [Oryza sativa (japonica cultivar-group)] Length = 368 Score = 433 bits (1113), Expect(2) = e-163 Identities = 224/288 (77%), Positives = 246/288 (85%), Gaps = 2/288 (0%) Frame = +2 Query: 374 MLGGLYGDLPPPSSTPADDDKPSAAVWSSATKMAPPTLRKPSTTFAPSPSLLRNQHPRPT 553 MLGGLYGDLPPPSS+ ADDDKPSAA WSSA KMAPPTLRKP TFAP PS+LRN P P Sbjct: 1 MLGGLYGDLPPPSSS-ADDDKPSAAGWSSAAKMAPPTLRKPPATFAPPPSVLRNSRPAP- 58 Query: 554 PKTTSAPAATAPPPP-LPLDTTTTSSFQPALVAVQSTVLEEYDPARPNDYEDYRREKLKR 730 APAA PPPP LP++TTT++SFQPALVAVQSTV+EEYDPARPNDYEDYR++KLKR Sbjct: 59 ----KAPAAQPPPPPTLPIETTTSTSFQPALVAVQSTVMEEYDPARPNDYEDYRKDKLKR 114 Query: 731 AKEAEMKKELERRRREDEEREREREQREREALEREERDYQSRASSLNISGEEAWKRRAAM 910 AKEAE++KELERRRRE+EERERERE RERE + +LNISGEEAWKRRAAM Sbjct: 115 AKEAEVRKELERRRREEEERERERELREREGRD-----------ALNISGEEAWKRRAAM 163 Query: 911 SGPSQRTPSS-PPHGGGFTIGSSSSSGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQG 1087 SG + PSS PPHG GF IG+SSSSGLG+GAGGQMTAAQRMMA+MGWKEGQGLGKQEQG Sbjct: 164 SGSAAPRPSSSPPHGDGFAIGNSSSSGLGLGAGGQMTAAQRMMARMGWKEGQGLGKQEQG 223 Query: 1088 ITAPLVARKTDKRGGVIVDENSSRSEKNPKSVNFDGLPTRILLLRNMV 1231 ITAPLVA+KTD+RGGVIVDENSS+ EK PKSVNFDG PTR+LLLRNMV Sbjct: 224 ITAPLVAKKTDRRGGVIVDENSSKQEKKPKSVNFDGPPTRVLLLRNMV 271 Score = 167 bits (423), Expect(2) = e-163 Identities = 81/95 (85%), Positives = 90/95 (94%) Frame = +1 Query: 1228 GEVDDELEDEVASECAKYGTVSRVLIFEITQANFPADEAVRIFIQFERAEETTKAMIDLQ 1407 GEVDDELE+EVASEC+KYGTV RVLIFEITQA+FPA+EAVRIFI FERAEE TKAMIDL+ Sbjct: 274 GEVDDELEEEVASECSKYGTVLRVLIFEITQADFPAEEAVRIFILFERAEEATKAMIDLE 333 Query: 1408 GRFFGGRVVKTSFFDEERFERNELAPMPGEVAGFD 1512 GRFFGGRVV+ +FFDEERF +N+LAPMPGEVAGFD Sbjct: 334 GRFFGGRVVRATFFDEERFGKNQLAPMPGEVAGFD 368 >ref|NP_001043226.1| Os01g0526100 [Oryza sativa (japonica cultivar-group)] dbj|BAF05140.1| Os01g0526100 [Oryza sativa (japonica cultivar-group)] Length = 373 Score = 433 bits (1113), Expect(2) = e-158 Identities = 224/288 (77%), Positives = 246/288 (85%), Gaps = 2/288 (0%) Frame = +2 Query: 374 MLGGLYGDLPPPSSTPADDDKPSAAVWSSATKMAPPTLRKPSTTFAPSPSLLRNQHPRPT 553 MLGGLYGDLPPPSS+ ADDDKPSAA WSSA KMAPPTLRKP TFAP PS+LRN P P Sbjct: 1 MLGGLYGDLPPPSSS-ADDDKPSAAGWSSAAKMAPPTLRKPPATFAPPPSVLRNSRPAP- 58 Query: 554 PKTTSAPAATAPPPP-LPLDTTTTSSFQPALVAVQSTVLEEYDPARPNDYEDYRREKLKR 730 APAA PPPP LP++TTT++SFQPALVAVQSTV+EEYDPARPNDYEDYR++KLKR Sbjct: 59 ----KAPAAQPPPPPTLPIETTTSTSFQPALVAVQSTVMEEYDPARPNDYEDYRKDKLKR 114 Query: 731 AKEAEMKKELERRRREDEEREREREQREREALEREERDYQSRASSLNISGEEAWKRRAAM 910 AKEAE++KELERRRRE+EERERERE RERE + +LNISGEEAWKRRAAM Sbjct: 115 AKEAEVRKELERRRREEEERERERELREREGRD-----------ALNISGEEAWKRRAAM 163 Query: 911 SGPSQRTPSS-PPHGGGFTIGSSSSSGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQG 1087 SG + PSS PPHG GF IG+SSSSGLG+GAGGQMTAAQRMMA+MGWKEGQGLGKQEQG Sbjct: 164 SGSAAPRPSSSPPHGDGFAIGNSSSSGLGLGAGGQMTAAQRMMARMGWKEGQGLGKQEQG 223 Query: 1088 ITAPLVARKTDKRGGVIVDENSSRSEKNPKSVNFDGLPTRILLLRNMV 1231 ITAPLVA+KTD+RGGVIVDENSS+ EK PKSVNFDG PTR+LLLRNMV Sbjct: 224 ITAPLVAKKTDRRGGVIVDENSSKQEKKPKSVNFDGPPTRVLLLRNMV 271 Score = 153 bits (386), Expect(2) = e-158 Identities = 74/88 (84%), Positives = 83/88 (94%) Frame = +1 Query: 1228 GEVDDELEDEVASECAKYGTVSRVLIFEITQANFPADEAVRIFIQFERAEETTKAMIDLQ 1407 GEVDDELE+EVASEC+KYGTV RVLIFEITQA+FPA+EAVRIFI FERAEE TKAMIDL+ Sbjct: 274 GEVDDELEEEVASECSKYGTVLRVLIFEITQADFPAEEAVRIFILFERAEEATKAMIDLE 333 Query: 1408 GRFFGGRVVKTSFFDEERFERNELAPMP 1491 GRFFGGRVV+ +FFDEERF +N+LAPMP Sbjct: 334 GRFFGGRVVRATFFDEERFGKNQLAPMP 361 >gb|EAY74353.1| hypothetical protein OsI_002200 [Oryza sativa (indica cultivar-group)] Length = 337 Score = 380 bits (975), Expect(2) = e-147 Identities = 196/256 (76%), Positives = 217/256 (84%), Gaps = 2/256 (0%) Frame = +2 Query: 470 MAPPTLRKPSTTFAPSPSLLRNQHPRPTPKTTSAPAATAPPPP-LPLDTTTTSSFQPALV 646 MAPPTLRKP TFAP PS+LRN P P APAA PPPP LP++TTT++SFQPALV Sbjct: 1 MAPPTLRKPPATFAPPPSVLRNSRPAP-----KAPAAQPPPPPTLPVETTTSTSFQPALV 55 Query: 647 AVQSTVLEEYDPARPNDYEDYRREKLKRAKEAEMKKELERRRREDEEREREREQREREAL 826 AVQSTV+EEYDPARPNDYEDYR++KLKRAKEAE++KELERRRRE+EERERERE RERE Sbjct: 56 AVQSTVMEEYDPARPNDYEDYRKDKLKRAKEAEVRKELERRRREEEERERERELREREGR 115 Query: 827 EREERDYQSRASSLNISGEEAWKRRAAMSGPSQRTPSS-PPHGGGFTIGSSSSSGLGVGA 1003 + +LNISGEEAWKRRAAMSG + PSS PPHG GF IG+SSSSGLG+GA Sbjct: 116 D-----------ALNISGEEAWKRRAAMSGSAAPRPSSSPPHGDGFAIGNSSSSGLGLGA 164 Query: 1004 GGQMTAAQRMMAKMGWKEGQGLGKQEQGITAPLVARKTDKRGGVIVDENSSRSEKNPKSV 1183 GGQMTAAQRMMA+MGWKEGQGLGKQEQGITAPLVA+KTD+RGGVIVDENSS+ EK PKSV Sbjct: 165 GGQMTAAQRMMARMGWKEGQGLGKQEQGITAPLVAKKTDRRGGVIVDENSSKQEKKPKSV 224 Query: 1184 NFDGLPTRILLLRNMV 1231 NFDG PTR+LLLRNMV Sbjct: 225 NFDGPPTRVLLLRNMV 240 Score = 167 bits (423), Expect(2) = e-147 Identities = 81/95 (85%), Positives = 90/95 (94%) Frame = +1 Query: 1228 GEVDDELEDEVASECAKYGTVSRVLIFEITQANFPADEAVRIFIQFERAEETTKAMIDLQ 1407 GEVDDELE+EVASEC+KYGTV RVLIFEITQA+FPA+EAVRIFI FERAEE TKAMIDL+ Sbjct: 243 GEVDDELEEEVASECSKYGTVLRVLIFEITQADFPAEEAVRIFILFERAEEATKAMIDLE 302 Query: 1408 GRFFGGRVVKTSFFDEERFERNELAPMPGEVAGFD 1512 GRFFGGRVV+ +FFDEERF +N+LAPMPGEVAGFD Sbjct: 303 GRFFGGRVVRATFFDEERFGKNQLAPMPGEVAGFD 337 >ref|NP_174336.1| DRT111 (DNA-damage-repair/toleration protein 111); nucleic acid binding / nucleotide binding [Arabidopsis thaliana] sp|P42698|DR111_ARATH DNA-damage-repair/toleration protein DRT111, chloroplast precursor gb|AAF19751.1|AC009917_10 Strong similarity to gi|1169200 DNA-Damage-Repair/Toleration protein (DRT111) precurser, and contains a G-patch PF|01585 domain and RNA recognition PF|00076 motif. EST gb|AA395591 comes from this gene. [Arabidopsis thaliana] gb|AAK76533.1| putative DNA damage repair protein [Arabidopsis thaliana] gb|AAM14338.1| putative DNA damage repair protein [Arabidopsis thaliana] Length = 387 Score = 320 bits (821), Expect(2) = e-123 Identities = 187/306 (61%), Positives = 227/306 (74%), Gaps = 20/306 (6%) Frame = +2 Query: 374 MLGGLYGDLPPPSSTPADDDKPS---AAVWSSATKMAPPTLRKPSTTFAPSPSLLRNQHP 544 MLGGLYGDLPPP+ DD+KPS ++VWSS+TKMAPPTLRKP FAP ++LR + Sbjct: 1 MLGGLYGDLPPPT----DDEKPSGNSSSVWSSSTKMAPPTLRKPPA-FAPPQTILRPLN- 54 Query: 545 RPTPKTTSAPAATAPPPP--------LPLDTTTTSSFQPALVAVQSTVLEEYDPARPNDY 700 +P P SAP PPPP +P + + S QPALV V S+V+EEYDPARPNDY Sbjct: 55 KPKP-IVSAPYK--PPPPSNSSQSVLIPANESAPSH-QPALVGVTSSVIEEYDPARPNDY 110 Query: 701 EDYRREKLKRAKEAEMKKELERRRREDEERE-REREQREREALEREERDYQSRASSLNIS 877 E+Y+REK ++A EAEMK+E+++RR+EDEER+ RERE+RE+E ERD S S LNIS Sbjct: 111 EEYKREKKRKATEAEMKREMDKRRQEDEERDKREREEREKE----RERD-NSDPSRLNIS 165 Query: 878 GEEAWKRRAAMSGPSQ----RTPSSPPHGGGFTIGSSSSSGLGVGAGGQMTAAQRMMAKM 1045 GEEAWKRRAAMSG R+ S P + GF+IG S +SGLGVGAGGQMTAAQRMMAKM Sbjct: 166 GEEAWKRRAAMSGGGSGGKGRSSSPPGNVDGFSIGKSETSGLGVGAGGQMTAAQRMMAKM 225 Query: 1046 GWKEGQGLGKQEQGITAPLVARKTDKRGGVIV----DENSSRSEKNPKSVNFDGLPTRIL 1213 GWK+GQGLGK EQGIT PL+A+KTD+R GVIV +++SS +K KSVN +G PTR+L Sbjct: 226 GWKQGQGLGKSEQGITTPLMAKKTDRRAGVIVNASENKSSSAEKKVVKSVNINGEPTRVL 285 Query: 1214 LLRNMV 1231 LLRNMV Sbjct: 286 LLRNMV 291 Score = 149 bits (376), Expect(2) = e-123 Identities = 66/94 (70%), Positives = 81/94 (86%) Frame = +1 Query: 1228 GEVDDELEDEVASECAKYGTVSRVLIFEITQANFPADEAVRIFIQFERAEETTKAMIDLQ 1407 G+VDDELEDEV EC KYGTV+RVLIFEIT+ NFP EAVRIF+QF R EETTKA++DL Sbjct: 294 GQVDDELEDEVGGECGKYGTVTRVLIFEITEPNFPVHEAVRIFVQFSRPEETTKALVDLD 353 Query: 1408 GRFFGGRVVKTSFFDEERFERNELAPMPGEVAGF 1509 GR+FGGR V+ +F+DEE+F +NELAP+PGE+ G+ Sbjct: 354 GRYFGGRTVRATFYDEEKFSKNELAPVPGEIPGY 387 >gb|AAA73382.1| [Arabidopsis thaliana recombination and DNA-damage resistance protein (DRT111) mRNA, complete cds.], gene product Length = 383 Score = 270 bits (690), Expect(2) = e-109 Identities = 159/297 (53%), Positives = 201/297 (67%), Gaps = 11/297 (3%) Frame = +2 Query: 374 MLGGLYGDLPPPSSTPADDDKPS---AAVWSSATKMAPPTLRKPSTTFAPSPSLLRNQH- 541 MLGGLYGDLPPP+ DD+KPS ++VWS +TKMAPPTLRKP FAP ++LR + Sbjct: 1 MLGGLYGDLPPPT----DDEKPSGNSSSVWSRSTKMAPPTLRKPPA-FAPPQTILRPLNK 55 Query: 542 PRPTPKTTSAPAATAPPPPLPLDTTTTSSFQPALVAVQSTVLEEYDPARPNDYEDYRREK 721 P+P P + L + S QPALV V S+V+EEYDPARPNDYE+Y+REK Sbjct: 56 PKPIVSAPYKPPPNSSQSVLIPANESAPSHQPALVGVTSSVIEEYDPARPNDYEEYKREK 115 Query: 722 LKRAKEAEMKKELERRRREDEEREREREQREREALEREERDYQSRASSLNISGEEAWK-- 895 ++A EAEMK+E+++RR + ER+ RERE ER ER+ + S++ISGEE + Sbjct: 116 KRKATEAEMKREMDKRR----QVYPERDMREREERERREREI-TVILSVDISGEERGRDP 170 Query: 896 RRAAMSGPSQRTPS-SPPHGGGFTIGSSSSSGLGVGAGGQMTAAQRMMAKMGWKEGQGLG 1072 R + + P P + GF+IG S SGLGVGAGGQMT AQRMM KMGWK+GQGLG Sbjct: 171 ARVVVEVLGREDPRLLPGNVDGFSIGKSKPSGLGVGAGGQMTPAQRMMPKMGWKQGQGLG 230 Query: 1073 KQEQGITAPLVARKTDKRGGVIV----DENSSRSEKNPKSVNFDGLPTRILLLRNMV 1231 K EQGI PL+A+KTD+R GVIV +++SS +K KSVN +G PTR+LLLRNMV Sbjct: 231 KSEQGIPTPLMAKKTDRRAGVIVNASENKSSSAEKKVVKSVNINGEPTRVLLLRNMV 287 Score = 150 bits (380), Expect(2) = e-109 Identities = 67/94 (71%), Positives = 82/94 (87%) Frame = +1 Query: 1228 GEVDDELEDEVASECAKYGTVSRVLIFEITQANFPADEAVRIFIQFERAEETTKAMIDLQ 1407 G+VDDELEDEV ECAKYGTV+RVLIFEIT+ NFP EAVRIF+QF R EETTKA++DL Sbjct: 290 GQVDDELEDEVGGECAKYGTVTRVLIFEITEPNFPVHEAVRIFVQFSRPEETTKALVDLD 349 Query: 1408 GRFFGGRVVKTSFFDEERFERNELAPMPGEVAGF 1509 GR+FGGR V+ +F+DEE+F +NELAP+PGE+ G+ Sbjct: 350 GRYFGGRTVRATFYDEEKFSKNELAPVPGEIPGY 383