BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphylf043p14
         (1004 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001066606.1| Os12g0291400 [Oryza sativa (japonica cultiva...   244   3e-84
ref|NP_001066604.1| Os12g0291100 [Oryza sativa (japonica cultiva...   244   2e-83
ref|NP_001066607.1| Os12g0292400 [Oryza sativa (japonica cultiva...   244   5e-83
gb|EAY82834.1| hypothetical protein OsI_036793 [Oryza sativa (in...   244   2e-82
dbj|BAA00539.1| small subunit of ribulose-1,5-bisphosphate carbo...   244   4e-82

>ref|NP_001066606.1| Os12g0291400 [Oryza sativa (japonica cultivar-group)]
 gb|ABA97173.1| Ribulose bisphosphate carboxylase small chain A, chloroplast
           precursor, putative, expressed [Oryza sativa (japonica
           cultivar-group)]
 gb|ABG21973.1| Ribulose bisphosphate carboxylase small chain A, chloroplast
           precursor, putative, expressed [Oryza sativa (japonica
           cultivar-group)]
 dbj|BAF29625.1| Os12g0291400 [Oryza sativa (japonica cultivar-group)]
 gb|EAZ20214.1| hypothetical protein OsJ_034423 [Oryza sativa (japonica
           cultivar-group)]
          Length = 175

 Score =  244 bits (624), Expect(2) = 3e-84
 Identities = 111/127 (87%), Positives = 120/127 (94%)
 Frame = +1

Query: 313 IQVWPIVGIKKFETLSYLPPLSQEDLLKQIEYLIRNNWIPCLEFSKVGFVYRENNRSPGY 492
           +QVWPI GIKKFETLSYLPPL+ EDLLKQIEYL+R+ W+PCLEFSKVGFVYREN+RSPGY
Sbjct: 48  MQVWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGY 107

Query: 493 YDGRYWTMWKLPMFGCTDASQVLKEVSEVNKEYPDAFVRIIGFDNVRQVQLISFIAYKPP 672
           YDGRYWTMWKLPMFGCTDA+QVLKE+ E  K YPDAFVRIIGFDNVRQVQLISFIAYKPP
Sbjct: 108 YDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPP 167

Query: 673 GCQESGG 693
           GC+ESGG
Sbjct: 168 GCEESGG 174



 Score = 92.0 bits (227), Expect(2) = 3e-84
 Identities = 46/50 (92%), Positives = 48/50 (96%)
 Frame = +3

Query: 57  MAPTVMASSATSVAPFQGLKSTAGLPVSRRSSSTGLGSVTNGGRIRCMQV 206
           MAPTVMASSATSVAPFQGLKSTAGLPVSRRS+S GLGSV+NGGRI CMQV
Sbjct: 1   MAPTVMASSATSVAPFQGLKSTAGLPVSRRSNSAGLGSVSNGGRISCMQV 50


>ref|NP_001066604.1| Os12g0291100 [Oryza sativa (japonica cultivar-group)]
 sp|P18566|RBS2_ORYSJ Ribulose bisphosphate carboxylase small chain A, chloroplast
           precursor (RuBisCO small subunit A)
 gb|AAR19268.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           [Oryza sativa (japonica cultivar-group)]
 gb|ABA97169.1| Ribulose bisphosphate carboxylase small chain A, chloroplast
           precursor, putative, expressed [Oryza sativa (japonica
           cultivar-group)]
 gb|ABG21974.1| Ribulose bisphosphate carboxylase small chain A, chloroplast
           precursor, putative, expressed [Oryza sativa (japonica
           cultivar-group)]
 gb|ABG21975.1| Ribulose bisphosphate carboxylase small chain A, chloroplast
           precursor, putative, expressed [Oryza sativa (japonica
           cultivar-group)]
 dbj|BAF29623.1| Os12g0291100 [Oryza sativa (japonica cultivar-group)]
 gb|ABR25686.1| ribulose bisphosphate carboxylase small chain c [Oryza sativa
           (indica cultivar-group)]
          Length = 175

 Score =  244 bits (624), Expect(2) = 2e-83
 Identities = 111/127 (87%), Positives = 120/127 (94%)
 Frame = +1

Query: 313 IQVWPIVGIKKFETLSYLPPLSQEDLLKQIEYLIRNNWIPCLEFSKVGFVYRENNRSPGY 492
           +QVWPI GIKKFETLSYLPPL+ EDLLKQIEYL+R+ W+PCLEFSKVGFVYREN+RSPGY
Sbjct: 48  MQVWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGY 107

Query: 493 YDGRYWTMWKLPMFGCTDASQVLKEVSEVNKEYPDAFVRIIGFDNVRQVQLISFIAYKPP 672
           YDGRYWTMWKLPMFGCTDA+QVLKE+ E  K YPDAFVRIIGFDNVRQVQLISFIAYKPP
Sbjct: 108 YDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPP 167

Query: 673 GCQESGG 693
           GC+ESGG
Sbjct: 168 GCEESGG 174



 Score = 89.7 bits (221), Expect(2) = 2e-83
 Identities = 43/50 (86%), Positives = 49/50 (98%)
 Frame = +3

Query: 57  MAPTVMASSATSVAPFQGLKSTAGLPVSRRSSSTGLGSVTNGGRIRCMQV 206
           MAPTVMASSATSVAPFQGLKSTAGLPVSRRS+++G G+V+NGGRI+CMQV
Sbjct: 1   MAPTVMASSATSVAPFQGLKSTAGLPVSRRSTNSGFGNVSNGGRIKCMQV 50


>ref|NP_001066607.1| Os12g0292400 [Oryza sativa (japonica cultivar-group)]
 gb|ABA97179.1| Ribulose bisphosphate carboxylase small chain C, chloroplast
           precursor, putative, expressed [Oryza sativa (japonica
           cultivar-group)]
 gb|ABA97180.1| Ribulose bisphosphate carboxylase small chain C, chloroplast
           precursor, putative, expressed [Oryza sativa (japonica
           cultivar-group)]
 dbj|BAF29626.1| Os12g0292400 [Oryza sativa (japonica cultivar-group)]
 gb|EAZ20216.1| hypothetical protein OsJ_034425 [Oryza sativa (japonica
           cultivar-group)]
 gb|ABR25478.1| ribulose bisphosphate carboxylase small chain c [Oryza sativa
           (indica cultivar-group)]
          Length = 175

 Score =  244 bits (624), Expect(2) = 5e-83
 Identities = 111/127 (87%), Positives = 120/127 (94%)
 Frame = +1

Query: 313 IQVWPIVGIKKFETLSYLPPLSQEDLLKQIEYLIRNNWIPCLEFSKVGFVYRENNRSPGY 492
           +QVWPI GIKKFETLSYLPPL+ EDLLKQIEYL+R+ W+PCLEFSKVGFVYREN+RSPGY
Sbjct: 48  MQVWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGY 107

Query: 493 YDGRYWTMWKLPMFGCTDASQVLKEVSEVNKEYPDAFVRIIGFDNVRQVQLISFIAYKPP 672
           YDGRYWTMWKLPMFGCTDA+QVLKE+ E  K YPDAFVRIIGFDNVRQVQLISFIAYKPP
Sbjct: 108 YDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPP 167

Query: 673 GCQESGG 693
           GC+ESGG
Sbjct: 168 GCEESGG 174



 Score = 88.2 bits (217), Expect(2) = 5e-83
 Identities = 43/50 (86%), Positives = 48/50 (96%)
 Frame = +3

Query: 57  MAPTVMASSATSVAPFQGLKSTAGLPVSRRSSSTGLGSVTNGGRIRCMQV 206
           MAP+VMASSATSVAPFQGLKSTAGLPV+RRSSS+  G+V+NGGRIRCMQV
Sbjct: 1   MAPSVMASSATSVAPFQGLKSTAGLPVNRRSSSSSFGNVSNGGRIRCMQV 50


>gb|EAY82834.1| hypothetical protein OsI_036793 [Oryza sativa (indica
           cultivar-group)]
          Length = 175

 Score =  244 bits (624), Expect(2) = 2e-82
 Identities = 111/127 (87%), Positives = 120/127 (94%)
 Frame = +1

Query: 313 IQVWPIVGIKKFETLSYLPPLSQEDLLKQIEYLIRNNWIPCLEFSKVGFVYRENNRSPGY 492
           +QVWPI GIKKFETLSYLPPL+ EDLLKQIEYL+R+ W+PCLEFSKVGFVYREN+RSPGY
Sbjct: 48  MQVWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGY 107

Query: 493 YDGRYWTMWKLPMFGCTDASQVLKEVSEVNKEYPDAFVRIIGFDNVRQVQLISFIAYKPP 672
           YDGRYWTMWKLPMFGCTDA+QVLKE+ E  K YPDAFVRIIGFDNVRQVQLISFIAYKPP
Sbjct: 108 YDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPP 167

Query: 673 GCQESGG 693
           GC+ESGG
Sbjct: 168 GCEESGG 174



 Score = 85.9 bits (211), Expect(2) = 2e-82
 Identities = 42/50 (84%), Positives = 47/50 (94%)
 Frame = +3

Query: 57  MAPTVMASSATSVAPFQGLKSTAGLPVSRRSSSTGLGSVTNGGRIRCMQV 206
           MAP+VMASSATSVAPFQGLK TAGLPV+RRSSS+  G+V+NGGRIRCMQV
Sbjct: 1   MAPSVMASSATSVAPFQGLKFTAGLPVNRRSSSSSFGNVSNGGRIRCMQV 50


>dbj|BAA00539.1| small subunit of ribulose-1,5-bisphosphate carboxylase [Oryza
           sativa Japonica Group]
          Length = 175

 Score =  244 bits (623), Expect(2) = 4e-82
 Identities = 110/127 (86%), Positives = 120/127 (94%)
 Frame = +1

Query: 313 IQVWPIVGIKKFETLSYLPPLSQEDLLKQIEYLIRNNWIPCLEFSKVGFVYRENNRSPGY 492
           +QVWPI GIKKFETLSYLPPL+ EDLLKQIEYL+R+ W+PCLEFSKVGFVYREN+RSPGY
Sbjct: 48  MQVWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGY 107

Query: 493 YDGRYWTMWKLPMFGCTDASQVLKEVSEVNKEYPDAFVRIIGFDNVRQVQLISFIAYKPP 672
           YDGRYWTMWKLPMFGCTDA+QVLKE+ E  K YPDAF+RIIGFDNVRQVQLISFIAYKPP
Sbjct: 108 YDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFIRIIGFDNVRQVQLISFIAYKPP 167

Query: 673 GCQESGG 693
           GC+ESGG
Sbjct: 168 GCEESGG 174



 Score = 85.5 bits (210), Expect(2) = 4e-82
 Identities = 42/50 (84%), Positives = 48/50 (96%)
 Frame = +3

Query: 57  MAPTVMASSATSVAPFQGLKSTAGLPVSRRSSSTGLGSVTNGGRIRCMQV 206
           MAPTVMASSATSVAPFQGLKSTAGLPVSRRS+++G G+V+NGGRI+ MQV
Sbjct: 1   MAPTVMASSATSVAPFQGLKSTAGLPVSRRSTNSGFGNVSNGGRIKFMQV 50