BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphylf032e11
         (1556 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL73528.1|AF466200_7 putative RNA polymerase II complex comp...    80   5e-13
ref|NP_001060943.1| Os08g0135600 [Oryza sativa (japonica cultiva...    75   2e-11
dbj|BAD03057.1| RNA polymerase II complex component SRB7 protein...    75   2e-11
gb|EAZ05509.1| hypothetical protein OsI_026741 [Oryza sativa (in...    74   2e-11

>gb|AAL73528.1|AF466200_7 putative RNA polymerase II complex component SRB7 [Sorghum bicolor]
          Length = 159

 Score = 79.7 bits (195), Expect = 5e-13
 Identities = 39/44 (88%), Positives = 41/44 (93%)
 Frame = +3

Query: 1188 MQAENEVVGLEFQKQLEAAELELKQVEVLFNEATDNCINMKKLD 1319
            +QAENEVVGLE QKQLEAAE ELKQVEVLFNEATDNCIN K+LD
Sbjct: 116  LQAENEVVGLELQKQLEAAERELKQVEVLFNEATDNCINFKRLD 159


>ref|NP_001060943.1| Os08g0135600 [Oryza sativa (japonica cultivar-group)]
 dbj|BAF22857.1| Os08g0135600 [Oryza sativa (japonica cultivar-group)]
          Length = 523

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 36/42 (85%), Positives = 39/42 (92%)
 Frame = +3

Query: 1188 MQAENEVVGLEFQKQLEAAELELKQVEVLFNEATDNCINMKK 1313
            +QAENEVVG E QKQLEAAELELKQVE LFNEATD+CIN+KK
Sbjct: 480  LQAENEVVGTELQKQLEAAELELKQVEALFNEATDHCINLKK 521


>dbj|BAD03057.1| RNA polymerase II complex component SRB7 protein-like [Oryza sativa
            (japonica cultivar-group)]
 dbj|BAD16305.1| RNA polymerase II complex component SRB7 protein-like [Oryza sativa
            (japonica cultivar-group)]
 gb|EAZ41437.1| hypothetical protein OsJ_024920 [Oryza sativa (japonica
            cultivar-group)]
          Length = 236

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 36/42 (85%), Positives = 39/42 (92%)
 Frame = +3

Query: 1188 MQAENEVVGLEFQKQLEAAELELKQVEVLFNEATDNCINMKK 1313
            +QAENEVVG E QKQLEAAELELKQVE LFNEATD+CIN+KK
Sbjct: 193  LQAENEVVGTELQKQLEAAELELKQVEALFNEATDHCINLKK 234


>gb|EAZ05509.1| hypothetical protein OsI_026741 [Oryza sativa (indica
            cultivar-group)]
          Length = 172

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 36/42 (85%), Positives = 39/42 (92%)
 Frame = +3

Query: 1188 MQAENEVVGLEFQKQLEAAELELKQVEVLFNEATDNCINMKK 1313
            +QAENEVVG E QKQLEAAELELKQVE LFNEATD+CIN+KK
Sbjct: 129  LQAENEVVGSELQKQLEAAELELKQVEALFNEATDHCINLKK 170