BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphylf026n12
         (1158 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001044929.1| Os01g0869800 [Oryza sativa (japonica cultiva...   426   e-117
gb|ABC59516.1| chloroplast photosystem II 22 kDa component [Nico...   382   e-104
gb|ABC59515.1| chloroplast photosystem II 22 kDa component [Nico...   380   e-104
emb|CAO61870.1| unnamed protein product [Vitis vinifera]              379   e-103
sp|Q9SMB4|PSBS_TOBAC Photosystem II 22 kDa protein, chloroplast ...   378   e-103

>ref|NP_001044929.1| Os01g0869800 [Oryza sativa (japonica cultivar-group)]
 dbj|BAB64099.1| putative photosystem II subunit PsbS [Oryza sativa (japonica
           cultivar-group)]
 dbj|BAB89811.1| putative photosystem II subunit PsbS [Oryza sativa (japonica
           cultivar-group)]
 dbj|BAF06843.1| Os01g0869800 [Oryza sativa (japonica cultivar-group)]
 gb|EAY76635.1| hypothetical protein OsI_004482 [Oryza sativa (indica
           cultivar-group)]
 gb|EAZ14301.1| hypothetical protein OsJ_004126 [Oryza sativa (japonica
           cultivar-group)]
          Length = 268

 Score =  426 bits (1095), Expect = e-117
 Identities = 227/271 (83%), Positives = 241/271 (88%), Gaps = 2/271 (0%)
 Frame = +2

Query: 89  MARSMLMSSVSGVASASGRSLLHAVRPTPLSRFVLSSQPSYCKRMAPLSVKTVALFGGKS 268
           MA+SML+S  +G  +A+  S L  VRPTP SR VLS   S   R   +SVKTVALFG +S
Sbjct: 1   MAQSMLVSGANGTVAAASTSRLQPVRPTPFSRLVLSQPSSSLGRA--VSVKTVALFG-RS 57

Query: 269 KAKAAPARKAETKPKFKTEDGIFGTSGGIGFTKENELFVGRVAMLGFAASILGEAITGKG 448
           K KAAPARKAE KPKFKTEDGIFGTSGGIGFTKENELFVGRVAMLGFAASILGEAITGKG
Sbjct: 58  KTKAAPARKAEPKPKFKTEDGIFGTSGGIGFTKENELFVGRVAMLGFAASILGEAITGKG 117

Query: 449 ILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGSFVDEP--TGLDKAVVPPGKG 622
           ILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGSFVD+   TGLDKAV+ PGKG
Sbjct: 118 ILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGSFVDDQPVTGLDKAVIAPGKG 177

Query: 623 LRAALGLGEGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPISE 802
            R+ALGL EGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPI+E
Sbjct: 178 FRSALGLSEGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPINE 237

Query: 803 IEPLVLFNVIFFFVAAINPGTGKFVTTDDEE 895
           IEPLVLFNV+FFF+AAINPGTGKFV+ DDEE
Sbjct: 238 IEPLVLFNVVFFFIAAINPGTGKFVSDDDEE 268


>gb|ABC59516.1| chloroplast photosystem II 22 kDa component [Nicotiana benthamiana]
          Length = 277

 Score =  382 bits (981), Expect = e-104
 Identities = 205/280 (73%), Positives = 232/280 (82%), Gaps = 11/280 (3%)
 Frame = +2

Query: 89  MARSMLMSSVSGVASASGRSLLHAVRPTPLSRFVL--------SSQPSYCKRMAPLSVKT 244
           MA++ML+++ + V   S  SL+  ++P PLS F L        S+  S     +  +  T
Sbjct: 1   MAQTMLLTANAKVDLRSKESLVERLKPKPLSSFFLPSLSLKYPSASSSSSSSSSHFTSTT 60

Query: 245 VALFGGKSKAKAAPARKAETKPKFKTEDGIFGTSGGIGFTKENELFVGRVAMLGFAASIL 424
           VALF  KSKAKA PA+K   KPK K EDGIFGTSGGIGFTK+NELFVGRVAM+GFAAS+L
Sbjct: 61  VALF--KSKAKA-PAKKVVPKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLL 117

Query: 425 GEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGSFVDEPT---GLD 595
           GEAITGKGILAQLNLETGIPIYEAEPLLLFFILF LLGAIGALGDRG F+D+PT   GLD
Sbjct: 118 GEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGDRGKFIDDPTPPTGLD 177

Query: 596 KAVVPPGKGLRAALGLGEGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 775
           KAV+PPGKG ++ALGL EGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLN
Sbjct: 178 KAVIPPGKGFKSALGLSEGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 237

Query: 776 IETGVPISEIEPLVLFNVIFFFVAAINPGTGKFVTTDDEE 895
            ETGVPI+EIEPL+LFN++FFFVAAINPGTGKFVT ++EE
Sbjct: 238 FETGVPINEIEPLLLFNIVFFFVAAINPGTGKFVTDEEEE 277


>gb|ABC59515.1| chloroplast photosystem II 22 kDa component [Nicotiana benthamiana]
          Length = 274

 Score =  380 bits (977), Expect = e-104
 Identities = 203/277 (73%), Positives = 231/277 (83%), Gaps = 8/277 (2%)
 Frame = +2

Query: 89  MARSMLMSSVSGVASASGRSLLHAVRPTPLSRFVLSSQP-----SYCKRMAPLSVKTVAL 253
           MA++ML+++ + V   +   L+  ++P PLS F L S P     +     +  +  TVAL
Sbjct: 1   MAQTMLLTANAKVDLRNKEPLVERLKPKPLSSFFLPSLPLKYPSASSSSSSHFTSTTVAL 60

Query: 254 FGGKSKAKAAPARKAETKPKFKTEDGIFGTSGGIGFTKENELFVGRVAMLGFAASILGEA 433
           F  KSKAKA PA+K   KPK K EDGIFGTSGGIGFTK+NELFVGRVAM+GFAAS+LGEA
Sbjct: 61  F--KSKAKA-PAKKVVPKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEA 117

Query: 434 ITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGSFVDEP---TGLDKAV 604
           ITGKGILAQLNLETGIPIYEAEPLLLFFILF LLGAIGALGDRG F+D+P   TGLDKAV
Sbjct: 118 ITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGDRGKFIDDPVPATGLDKAV 177

Query: 605 VPPGKGLRAALGLGEGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLNIET 784
           +PPGKG ++ALGL EGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLN ET
Sbjct: 178 IPPGKGFKSALGLSEGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLNFET 237

Query: 785 GVPISEIEPLVLFNVIFFFVAAINPGTGKFVTTDDEE 895
           GVPI+EIEPL+LFN++FFFVAAINPGTGKFVT ++EE
Sbjct: 238 GVPINEIEPLLLFNIVFFFVAAINPGTGKFVTDEEEE 274


>emb|CAO61870.1| unnamed protein product [Vitis vinifera]
          Length = 270

 Score =  379 bits (974), Expect = e-103
 Identities = 207/274 (75%), Positives = 233/274 (85%), Gaps = 5/274 (1%)
 Frame = +2

Query: 89  MARSMLMS-SVSG--VASASGRSLLHAVRPTPLSRFVLSSQPSYCKRMAPLSVKTVALFG 259
           MA++ML++ SVSG  V     + LL  +RP P S  +L   P+     +P +  T+ALF 
Sbjct: 1   MAQTMLITPSVSGHSVLDLKRQPLLQRLRPKPFSHLLLPPLPTSSSTSSP-AFTTLALF- 58

Query: 260 GKSKAKAAPARKAETKPKFKTEDGIFGTSGGIGFTKENELFVGRVAMLGFAASILGEAIT 439
            KSK KAAP++K  TKPK + EDGIFGTSGGIGFTK+NELFVGRVAMLGFAAS+LGEAIT
Sbjct: 59  -KSKTKAAPSKKV-TKPKPQVEDGIFGTSGGIGFTKKNELFVGRVAMLGFAASLLGEAIT 116

Query: 440 GKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGSFVDE--PTGLDKAVVPP 613
           GKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRG FVD+  PTG++ AV+PP
Sbjct: 117 GKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVDDDPPTGIEGAVIPP 176

Query: 614 GKGLRAALGLGEGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVP 793
           GKGLR+ALGL EGGPLFGFTK+NELFVGRLAQLGI FSIIGEIITGKGALAQLNIETGVP
Sbjct: 177 GKGLRSALGLREGGPLFGFTKSNELFVGRLAQLGIVFSIIGEIITGKGALAQLNIETGVP 236

Query: 794 ISEIEPLVLFNVIFFFVAAINPGTGKFVTTDDEE 895
           IS+IEPLVLFNVIFFF AA+NPG+GKFVT D+EE
Sbjct: 237 ISDIEPLVLFNVIFFFFAALNPGSGKFVTDDEEE 270


>sp|Q9SMB4|PSBS_TOBAC Photosystem II 22 kDa protein, chloroplast precursor (CP22)
 emb|CAA59007.1| precursor of photosystem II subunit (22KDa) [Nicotiana tabacum]
          Length = 274

 Score =  378 bits (970), Expect = e-103
 Identities = 203/277 (73%), Positives = 230/277 (83%), Gaps = 8/277 (2%)
 Frame = +2

Query: 89  MARSMLMSSVSGVASASGRSLLHAVRPTPLSRFVLSSQP-----SYCKRMAPLSVKTVAL 253
           MA++ML+++ + V   S  SL+  ++P PLS F L S P     +     +  +  TVAL
Sbjct: 1   MAQTMLLTANAKVDLRSKESLVERLKPKPLSSFFLPSLPLKYPSASASASSHFTSTTVAL 60

Query: 254 FGGKSKAKAAPARKAETKPKFKTEDGIFGTSGGIGFTKENELFVGRVAMLGFAASILGEA 433
           F  KSKAKA PA+K   KPK K EDGIFGTSGGIGFTK+NELFVGRVAM+GFAAS+LGEA
Sbjct: 61  F--KSKAKA-PAKKVVPKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEA 117

Query: 434 ITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGSFVDEP---TGLDKAV 604
           ITGKGILAQLNLETGIPIYEAEPLLLFFILF LLGAIGAL DRG F+D+P   TGLDKAV
Sbjct: 118 ITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALEDRGKFIDDPAPPTGLDKAV 177

Query: 605 VPPGKGLRAALGLGEGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLNIET 784
           +PPGKG ++ALGL EGGPLF FTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLN ET
Sbjct: 178 IPPGKGFKSALGLSEGGPLFEFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLNFET 237

Query: 785 GVPISEIEPLVLFNVIFFFVAAINPGTGKFVTTDDEE 895
           GVPI+EIEPL+LFN++FFFVAAINPGTGKFVT ++EE
Sbjct: 238 GVPINEIEPLLLFNIVFFFVAAINPGTGKFVTDEEEE 274