BLASTX 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf026a21 (1617 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 5,815,196 sequences; 2,006,227,497 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp|P93431|RCA_ORYSJ Ribulose bisphosphate carboxylase/oxygenase ... 860 0.0 gb|AAP83927.1| Rubisco activase alpha form precursor [Deschampsi... 835 0.0 sp|Q40073|RCAA_HORVU Ribulose bisphosphate carboxylase/oxygenase... 821 0.0 gb|ABG22614.1| Ribulose bisphosphate carboxylase/oxygenase activ... 791 0.0 ref|NP_001068555.1| Os11g0707000 [Oryza sativa (japonica cultiva... 791 0.0 >sp|P93431|RCA_ORYSJ Ribulose bisphosphate carboxylase/oxygenase activase, chloroplast precursor (RuBisCO activase) (RA) dbj|BAA97583.1| RuBisCO activase large isoform precursor [Oryza sativa (japonica cultivar-group)] dbj|BAC78572.1| ribulose-bisphosphate carboxylase activase large isoform precursor protein [Oryza sativa (japonica cultivar-group)] gb|ABA95522.1| Ribulose bisphosphate carboxylase/oxygenase activase, chloroplast precursor, putative, expressed [Oryza sativa (japonica cultivar-group)] gb|EAZ19330.1| hypothetical protein OsJ_033539 [Oryza sativa (japonica cultivar-group)] Length = 466 Score = 860 bits (2221), Expect = 0.0 Identities = 421/466 (90%), Positives = 444/466 (95%), Gaps = 3/466 (0%) Frame = +2 Query: 59 MAAAFSSTVGAPASTPANFLGKKLKKQVTSAVNYHGKSSNANRFRVMAKDLDEGEQTETD 238 MAAAFSSTVGAPASTP NFLGKKLKKQVTSAVNYHGKSSN NRF+VMAK+LDEG+QT+ D Sbjct: 1 MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSNINRFKVMAKELDEGKQTDQD 60 Query: 239 RWKGLAFDTSDDQQDITRGKGHVDSLFQAPMGDGTHEAVLSSYEYLSQGLRT--LDNMVG 412 RWKGLA+D SDDQQDITRGKG VDSLFQAP GDGTHEAVLSSYEYLSQGLRT DN +G Sbjct: 61 RWKGLAYDISDDQQDITRGKGFVDSLFQAPTGDGTHEAVLSSYEYLSQGLRTYDFDNTMG 120 Query: 413 EFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGVWGGKGQGKSFQCELVFSKMGINPIMM 592 FYIAPAFMDKLVVHI+KNFMTLPNIKVPLILG+WGGKGQGKSFQCELVF+KMGINPIMM Sbjct: 121 GFYIAPAFMDKLVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMM 180 Query: 593 SAGELESGNAGEPAKLLRQRYREAADIIKKGKMCALFINDLDAGAGRMGGTTQYTVNNQM 772 SAGELESGNAGEPAKL+RQRYREAADIIKKGKMC LFINDLDAGAGRMGGTTQYTVNNQM Sbjct: 181 SAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQM 240 Query: 773 VNATLMNIADNPTNVQLPGMYNKQENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 952 VNATLMNIADNPTNVQLPGMYNK++NPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR Sbjct: 241 VNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 300 Query: 953 EDRIGVCKGIFRTDNVPDEDVVKIVDAFPGQSIDFFGALRARVYDDEVRKWVTGTGVANI 1132 +DR+GVCKGIFRTDNVPDED+VKIVD+FPGQSIDFFGALRARVYDDEVRKWV+ TGV NI Sbjct: 301 DDRVGVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSDTGVENI 360 Query: 1133 GKSLVNSREGPPTFEQPKMTVEKLMGYGQMLVKEQENVKRVQLADKYMSEAALGDANQDA 1312 GK LVNSREGPP FEQPKMT+EKLM YG MLVKEQENVKRVQLA++Y+SEAALGDAN DA Sbjct: 361 GKRLVNSREGPPEFEQPKMTIEKLMEYGYMLVKEQENVKRVQLAEQYLSEAALGDANSDA 420 Query: 1313 LKTGSFYGKGAQQ-GKLPVPEGCTDPDAKNFDPTARSDDGSCLYTF 1447 +KTGSFYG+GAQQ G LPVPEGCTDP AKNFDPTARSDDGSCLYTF Sbjct: 421 MKTGSFYGQGAQQAGNLPVPEGCTDPVAKNFDPTARSDDGSCLYTF 466 >gb|AAP83927.1| Rubisco activase alpha form precursor [Deschampsia antarctica] Length = 465 Score = 835 bits (2158), Expect = 0.0 Identities = 408/465 (87%), Positives = 435/465 (93%), Gaps = 2/465 (0%) Frame = +2 Query: 59 MAAAFSSTVGAPASTPANFLGKKLKKQVTSAVNYHGKSSNANRFRVMAKDLDEGEQTETD 238 MAAAFSSTVGAPASTP +FLG KLKKQVTSAVNYHGKS ANRF VMAKD+DEG+QT+ D Sbjct: 1 MAAAFSSTVGAPASTPTSFLGNKLKKQVTSAVNYHGKSFKANRFTVMAKDIDEGKQTDGD 60 Query: 239 RWKGLAFDTSDDQQDITRGKGHVDSLFQAPMGDGTHEAVLSSYEYLSQGLRT--LDNMVG 412 +WKGLA+D SDDQQDITRGKG VDSLFQAPMGDGTHEAVLSSYEY+SQGL+ DN +G Sbjct: 61 KWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAVLSSYEYVSQGLKKYDFDNTMG 120 Query: 413 EFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGVWGGKGQGKSFQCELVFSKMGINPIMM 592 FYIAPAFMDKLVVH++KNFMTLPNIK+PLILG+WGGKGQGKSFQCELVF+KMGINPIMM Sbjct: 121 GFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMM 180 Query: 593 SAGELESGNAGEPAKLLRQRYREAADIIKKGKMCALFINDLDAGAGRMGGTTQYTVNNQM 772 SAGELESGNAGEPAKL+RQRYREAAD+IKKGKMC LFINDLDAGAGRMGGTTQYTVNNQM Sbjct: 181 SAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQM 240 Query: 773 VNATLMNIADNPTNVQLPGMYNKQENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 952 VNATLMNIAD PTNVQLPGMYNK+ENPRVPI VTGNDFSTLYAPLI DGRMEKFYWAPTR Sbjct: 241 VNATLMNIADAPTNVQLPGMYNKEENPRVPIXVTGNDFSTLYAPLIPDGRMEKFYWAPTR 300 Query: 953 EDRIGVCKGIFRTDNVPDEDVVKIVDAFPGQSIDFFGALRARVYDDEVRKWVTGTGVANI 1132 EDRIGVCKGIF+TDNV DE VVKIVD FPGQSIDFFGALRARVYDDEVRKWV+ TG+ NI Sbjct: 301 EDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVSSTGIENI 360 Query: 1133 GKSLVNSREGPPTFEQPKMTVEKLMGYGQMLVKEQENVKRVQLADKYMSEAALGDANQDA 1312 GK LVNSR+GP TFEQPKMTVEKL+ YG MLV+EQ+NVKRVQLAD YMS+AALGDAN+DA Sbjct: 361 GKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANKDA 420 Query: 1313 LKTGSFYGKGAQQGKLPVPEGCTDPDAKNFDPTARSDDGSCLYTF 1447 +KTGSFYGKGAQQG LPVPEGCTD DAKNFDPTARSDDGSCLYTF Sbjct: 421 MKTGSFYGKGAQQGTLPVPEGCTDRDAKNFDPTARSDDGSCLYTF 465 >sp|Q40073|RCAA_HORVU Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplast precursor (RuBisCO activase A) (RA A) gb|AAA63164.1| ribulose 1,5-bisphosphate carboxylase activase isoform 2 [Hordeum vulgare subsp. vulgare] Length = 464 Score = 821 bits (2120), Expect = 0.0 Identities = 404/465 (86%), Positives = 431/465 (92%), Gaps = 2/465 (0%) Frame = +2 Query: 59 MAAAFSSTVGAPASTPANFLGKKLKKQVTSAVNYHGKSSNANRFRVMAKDLDEGEQTETD 238 MAAAFSSTVGAPASTP NFLGKKLKKQVTSAVNYHGKSS ANRF VMA + + E+ TD Sbjct: 1 MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAE-NIDEKRNTD 59 Query: 239 RWKGLAFDTSDDQQDITRGKGHVDSLFQAPMGDGTHEAVLSSYEYLSQGLRT--LDNMVG 412 +WKGLA+D SDDQQDITRGKG VDSLFQAP G GTHEAVLSSYEY+SQGLR DN +G Sbjct: 60 KWKGLAYDISDDQQDITRGKGIVDSLFQAPTGHGTHEAVLSSYEYVSQGLRKYDFDNTMG 119 Query: 413 EFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGVWGGKGQGKSFQCELVFSKMGINPIMM 592 FYIAPAFMDKLVVH++KNFMTLPNIK+PLILG+WGGKGQGKSFQCELVF+KMGINPIMM Sbjct: 120 GFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMM 179 Query: 593 SAGELESGNAGEPAKLLRQRYREAADIIKKGKMCALFINDLDAGAGRMGGTTQYTVNNQM 772 SAGELESGNAGEPAKL+RQRYREAAD+IKKGKMC LFINDLDAGAGRMGGTTQYTVNNQM Sbjct: 180 SAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQM 239 Query: 773 VNATLMNIADNPTNVQLPGMYNKQENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 952 VNATLMNIAD PTNVQLPGMYNK+ENPRVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR Sbjct: 240 VNATLMNIADAPTNVQLPGMYNKRENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTR 299 Query: 953 EDRIGVCKGIFRTDNVPDEDVVKIVDAFPGQSIDFFGALRARVYDDEVRKWVTGTGVANI 1132 +DRIGVCKGIF+TDNV DE VVKIVD FPGQSIDFFGALRARVYDDEVRKWV TG+ NI Sbjct: 300 DDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENI 359 Query: 1133 GKSLVNSREGPPTFEQPKMTVEKLMGYGQMLVKEQENVKRVQLADKYMSEAALGDANQDA 1312 GK LVNSR+GP TFEQPKMTVEKL+ YG MLV+EQ+NVKRVQLAD YMS+AALGDANQDA Sbjct: 360 GKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDA 419 Query: 1313 LKTGSFYGKGAQQGKLPVPEGCTDPDAKNFDPTARSDDGSCLYTF 1447 +KTGSFYGKGAQQG LPVPEGCTD +AKN+DPTARSDDGSCLYTF Sbjct: 420 MKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 464 >gb|ABG22614.1| Ribulose bisphosphate carboxylase/oxygenase activase, chloroplast precursor, putative, expressed [Oryza sativa (japonica cultivar-group)] gb|EAY81918.1| hypothetical protein OsI_035877 [Oryza sativa (indica cultivar-group)] Length = 428 Score = 791 bits (2044), Expect = 0.0 Identities = 387/428 (90%), Positives = 409/428 (95%), Gaps = 2/428 (0%) Frame = +2 Query: 59 MAAAFSSTVGAPASTPANFLGKKLKKQVTSAVNYHGKSSNANRFRVMAKDLDEGEQTETD 238 MAAAFSSTVGAPASTP NFLGKKLKKQVTSAVNYHGKSSN NRF+VMAK+LDEG+QT+ D Sbjct: 1 MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSNINRFKVMAKELDEGKQTDQD 60 Query: 239 RWKGLAFDTSDDQQDITRGKGHVDSLFQAPMGDGTHEAVLSSYEYLSQGLRT--LDNMVG 412 RWKGLA+D SDDQQDITRGKG VDSLFQAP GDGTHEAVLSSYEYLSQGLRT DN +G Sbjct: 61 RWKGLAYDISDDQQDITRGKGFVDSLFQAPTGDGTHEAVLSSYEYLSQGLRTYDFDNTMG 120 Query: 413 EFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGVWGGKGQGKSFQCELVFSKMGINPIMM 592 FYIAPAFMDKLVVHI+KNFMTLPNIKVPLILG+WGGKGQGKSFQCELVF+KMGINPIMM Sbjct: 121 GFYIAPAFMDKLVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMM 180 Query: 593 SAGELESGNAGEPAKLLRQRYREAADIIKKGKMCALFINDLDAGAGRMGGTTQYTVNNQM 772 SAGELESGNAGEPAKL+RQRYREAADIIKKGKMC LFINDLDAGAGRMGGTTQYTVNNQM Sbjct: 181 SAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQM 240 Query: 773 VNATLMNIADNPTNVQLPGMYNKQENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 952 VNATLMNIADNPTNVQLPGMYNK++NPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR Sbjct: 241 VNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 300 Query: 953 EDRIGVCKGIFRTDNVPDEDVVKIVDAFPGQSIDFFGALRARVYDDEVRKWVTGTGVANI 1132 +DR+GVCKGIFRTDNVPDED+VKIVD+FPGQSIDFFGALRARVYDDEVRKWV+ TGV NI Sbjct: 301 DDRVGVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSDTGVENI 360 Query: 1133 GKSLVNSREGPPTFEQPKMTVEKLMGYGQMLVKEQENVKRVQLADKYMSEAALGDANQDA 1312 GK LVNSREGPP FEQPKMT+EKLM YG MLVKEQENVKRVQLA++Y+SEAALGDAN DA Sbjct: 361 GKRLVNSREGPPEFEQPKMTIEKLMEYGYMLVKEQENVKRVQLAEQYLSEAALGDANSDA 420 Query: 1313 LKTGSFYG 1336 +KTGSFYG Sbjct: 421 MKTGSFYG 428 >ref|NP_001068555.1| Os11g0707000 [Oryza sativa (japonica cultivar-group)] dbj|BAA97584.1| RuBisCO activase small isoform precursor [Oryza sativa] gb|AAX95286.1| RuBisCO activase small isoform precursor [Oryza sativa (japonica cultivar-group)] gb|ABA95523.1| Ribulose bisphosphate carboxylase/oxygenase activase, chloroplast precursor, putative, expressed [Oryza sativa (japonica cultivar-group)] dbj|BAF28918.1| Os11g0707000 [Oryza sativa (japonica cultivar-group)] Length = 433 Score = 791 bits (2044), Expect = 0.0 Identities = 387/428 (90%), Positives = 409/428 (95%), Gaps = 2/428 (0%) Frame = +2 Query: 59 MAAAFSSTVGAPASTPANFLGKKLKKQVTSAVNYHGKSSNANRFRVMAKDLDEGEQTETD 238 MAAAFSSTVGAPASTP NFLGKKLKKQVTSAVNYHGKSSN NRF+VMAK+LDEG+QT+ D Sbjct: 1 MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSNINRFKVMAKELDEGKQTDQD 60 Query: 239 RWKGLAFDTSDDQQDITRGKGHVDSLFQAPMGDGTHEAVLSSYEYLSQGLRT--LDNMVG 412 RWKGLA+D SDDQQDITRGKG VDSLFQAP GDGTHEAVLSSYEYLSQGLRT DN +G Sbjct: 61 RWKGLAYDISDDQQDITRGKGFVDSLFQAPTGDGTHEAVLSSYEYLSQGLRTYDFDNTMG 120 Query: 413 EFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGVWGGKGQGKSFQCELVFSKMGINPIMM 592 FYIAPAFMDKLVVHI+KNFMTLPNIKVPLILG+WGGKGQGKSFQCELVF+KMGINPIMM Sbjct: 121 GFYIAPAFMDKLVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMM 180 Query: 593 SAGELESGNAGEPAKLLRQRYREAADIIKKGKMCALFINDLDAGAGRMGGTTQYTVNNQM 772 SAGELESGNAGEPAKL+RQRYREAADIIKKGKMC LFINDLDAGAGRMGGTTQYTVNNQM Sbjct: 181 SAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQM 240 Query: 773 VNATLMNIADNPTNVQLPGMYNKQENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 952 VNATLMNIADNPTNVQLPGMYNK++NPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR Sbjct: 241 VNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 300 Query: 953 EDRIGVCKGIFRTDNVPDEDVVKIVDAFPGQSIDFFGALRARVYDDEVRKWVTGTGVANI 1132 +DR+GVCKGIFRTDNVPDED+VKIVD+FPGQSIDFFGALRARVYDDEVRKWV+ TGV NI Sbjct: 301 DDRVGVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSDTGVENI 360 Query: 1133 GKSLVNSREGPPTFEQPKMTVEKLMGYGQMLVKEQENVKRVQLADKYMSEAALGDANQDA 1312 GK LVNSREGPP FEQPKMT+EKLM YG MLVKEQENVKRVQLA++Y+SEAALGDAN DA Sbjct: 361 GKRLVNSREGPPEFEQPKMTIEKLMEYGYMLVKEQENVKRVQLAEQYLSEAALGDANSDA 420 Query: 1313 LKTGSFYG 1336 +KTGSFYG Sbjct: 421 MKTGSFYG 428