BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphylf024m04
         (1062 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl...   490   e-137
ref|NP_001044090.1| Os01g0720500 [Oryza sativa (japonica cultiva...   480   e-134
gb|ABF70112.1| chlorophyll A-B binding protein (CAB), putative [...   479   e-133
gb|AAA33396.1| light-harvesting chlorophyll a/b protein precursor     479   e-133
emb|CAJ77390.1| major chlorophyll a/b binding protein LHCb1.2 [S...   479   e-133

>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloroplast precursor (LHCII
           type I CAB-1) (LHCP)
 emb|CAA32900.1| unnamed protein product [Zea mays]
          Length = 262

 Score =  490 bits (1262), Expect = e-137
 Identities = 235/250 (94%), Positives = 241/250 (96%)
 Frame = +3

Query: 105 GTPVKVSRAAPFGEGRITMRKTAAKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFA 284
           GTP+KV     FGEGRITMRKT  KPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEF 
Sbjct: 15  GTPIKVGS---FGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFP 71

Query: 285 GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG 464
           GDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAG
Sbjct: 72  GDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAG 131

Query: 465 SQIFSDGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSF 644
           SQIFS+GGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSF
Sbjct: 132 SQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSF 191

Query: 645 DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNA 824
           DPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENLADH+ADPVNNNA
Sbjct: 192 DPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNA 251

Query: 825 WAYATNFVPG 854
           WAYATNFVPG
Sbjct: 252 WAYATNFVPG 261


>ref|NP_001044090.1| Os01g0720500 [Oryza sativa (japonica cultivar-group)]
 dbj|BAB84417.1| putative chlorophyll a/b-binding protein 3C precursor [Oryza sativa
           (japonica cultivar-group)]
 dbj|BAF06004.1| Os01g0720500 [Oryza sativa (japonica cultivar-group)]
 gb|EAY75641.1| hypothetical protein OsI_003488 [Oryza sativa (indica
           cultivar-group)]
 gb|EAZ13361.1| hypothetical protein OsJ_003186 [Oryza sativa (japonica
           cultivar-group)]
          Length = 265

 Score =  480 bits (1236), Expect = e-134
 Identities = 231/247 (93%), Positives = 237/247 (95%), Gaps = 1/247 (0%)
 Frame = +3

Query: 120 VSRAAPFGEGRITMRKTAAKPK-VAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFAGDYG 296
           V+ A  FGEGR+TMRK+AAKPK  AASGSPWYG DRV YLGP SGEPPSYLTGEF GDYG
Sbjct: 19  VANAKVFGEGRVTMRKSAAKPKPAAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYG 78

Query: 297 WDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIF 476
           WDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIF
Sbjct: 79  WDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIF 138

Query: 477 SDGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLG 656
           S+GGLDYLGNPSLIHAQSILAIW CQVVLMGAVEGYR+AGGPLGEVVDPLYPGGSFDPLG
Sbjct: 139 SEGGLDYLGNPSLIHAQSILAIWGCQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLG 198

Query: 657 LADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYA 836
           LADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVNNNAWAYA
Sbjct: 199 LADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYA 258

Query: 837 TNFVPGK 857
           TNFVPGK
Sbjct: 259 TNFVPGK 265


>gb|ABF70112.1| chlorophyll A-B binding protein (CAB), putative [Musa balbisiana]
          Length = 267

 Score =  479 bits (1234), Expect = e-133
 Identities = 232/254 (91%), Positives = 241/254 (94%), Gaps = 3/254 (1%)
 Frame = +3

Query: 105 GTPVKVSRAAP--FGEGRITMRKTAAKPK-VAASGSPWYGPDRVKYLGPFSGEPPSYLTG 275
           G  VK++ +A    GEGR+TMRK+ AK K  AASGSPWYGPDRVKYLGPFSGEPPSYLTG
Sbjct: 14  GKAVKLAPSASDVLGEGRVTMRKSTAKAKPAAASGSPWYGPDRVKYLGPFSGEPPSYLTG 73

Query: 276 EFAGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWF 455
           EF GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWF
Sbjct: 74  EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWF 133

Query: 456 KAGSQIFSDGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPG 635
           KAG+QIFS+GGLDYLGNPSLIHAQSILAIWACQV+LMGAVEGYRIAGGPLGEV DPLYPG
Sbjct: 134 KAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPLYPG 193

Query: 636 GSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVN 815
           GSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVN
Sbjct: 194 GSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 253

Query: 816 NNAWAYATNFVPGK 857
           NNAWAYATNFVPGK
Sbjct: 254 NNAWAYATNFVPGK 267


>gb|AAA33396.1| light-harvesting chlorophyll a/b protein precursor
          Length = 266

 Score =  479 bits (1234), Expect = e-133
 Identities = 231/253 (91%), Positives = 241/253 (95%), Gaps = 2/253 (0%)
 Frame = +3

Query: 105 GTPVKVSRAAP--FGEGRITMRKTAAKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGE 278
           G  VK++ AA   FGEGR++MRKTA KPK  +SGSPWYGPDRVKYLGPFSGE PSYLTGE
Sbjct: 14  GKAVKLAPAASEVFGEGRVSMRKTAGKPKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGE 73

Query: 279 FAGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 458
           FAGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFK
Sbjct: 74  FAGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVFPELLARNGVKFGEAVWFK 133

Query: 459 AGSQIFSDGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGG 638
           AGSQIFS+GGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYR+AGGPLGEVVDPLYPGG
Sbjct: 134 AGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVVLMGAVEGYRVAGGPLGEVVDPLYPGG 193

Query: 639 SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNN 818
           SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVNN
Sbjct: 194 SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 253

Query: 819 NAWAYATNFVPGK 857
           NAWA+ATNFVPGK
Sbjct: 254 NAWAFATNFVPGK 266


>emb|CAJ77390.1| major chlorophyll a/b binding protein LHCb1.2 [Spinacia oleracea]
 emb|CAJ77389.2| major chlorophyll a/b binding protein LHCb1.3 [Spinacia oleracea]
          Length = 267

 Score =  479 bits (1233), Expect = e-133
 Identities = 228/253 (90%), Positives = 239/253 (94%), Gaps = 2/253 (0%)
 Frame = +3

Query: 105 GTPVKVSRAAP--FGEGRITMRKTAAKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGE 278
           G  +K+   A    GEGR+TMRKTA KPK  +SGSPWYGPDRVKYLGPFSGE PSYLTGE
Sbjct: 15  GKAIKLGPTASEILGEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYLGPFSGEAPSYLTGE 74

Query: 279 FAGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 458
           F GDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK
Sbjct: 75  FPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 134

Query: 459 AGSQIFSDGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGG 638
           AGSQIFS+GGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYRIAGGPLGEVVDPLYPGG
Sbjct: 135 AGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGG 194

Query: 639 SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNN 818
           SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVNN
Sbjct: 195 SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 254

Query: 819 NAWAYATNFVPGK 857
           NAW++ATNFVPGK
Sbjct: 255 NAWSFATNFVPGK 267