BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphylf024f17
         (1069 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001044929.1| Os01g0869800 [Oryza sativa (japonica cultiva...   427   e-118
ref|NP_001105228.1| photosystem II subunit PsbS1 [Zea mays] >gi|...   394   e-108
emb|CAO61870.1| unnamed protein product [Vitis vinifera]              377   e-103
gb|ABC59515.1| chloroplast photosystem II 22 kDa component [Nico...   376   e-102
gb|ABC59516.1| chloroplast photosystem II 22 kDa component [Nico...   374   e-102

>ref|NP_001044929.1| Os01g0869800 [Oryza sativa (japonica cultivar-group)]
 dbj|BAB64099.1| putative photosystem II subunit PsbS [Oryza sativa (japonica
           cultivar-group)]
 dbj|BAB89811.1| putative photosystem II subunit PsbS [Oryza sativa (japonica
           cultivar-group)]
 dbj|BAF06843.1| Os01g0869800 [Oryza sativa (japonica cultivar-group)]
 gb|EAY76635.1| hypothetical protein OsI_004482 [Oryza sativa (indica
           cultivar-group)]
 gb|EAZ14301.1| hypothetical protein OsJ_004126 [Oryza sativa (japonica
           cultivar-group)]
          Length = 268

 Score =  427 bits (1098), Expect = e-118
 Identities = 234/271 (86%), Positives = 243/271 (89%), Gaps = 3/271 (1%)
 Frame = +2

Query: 83  MAQSMLTSSASG-VAASGRSLLHAVRPTPLSRLVLSSQPSYYKHTPSLSVKTVALFGGKS 259
           MAQSML S A+G VAA+  S L  VRPTP SRLVLS   S      ++SVKTVALFG +S
Sbjct: 1   MAQSMLVSGANGTVAAASTSRLQPVRPTPFSRLVLSQPSSSLGR--AVSVKTVALFG-RS 57

Query: 260 KTKAAPARKAEAKPKVKTEDGIFGTSGGIGFTKENELFVGRVAMLGFAASILGEAITGKG 439
           KTKAAPARKAE KPK KTEDGIFGTSGGIGFTKENELFVGRVAMLGFAASILGEAITGKG
Sbjct: 58  KTKAAPARKAEPKPKFKTEDGIFGTSGGIGFTKENELFVGRVAMLGFAASILGEAITGKG 117

Query: 440 ILSQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGSFVDE--TTGLDKAVIPPGKG 613
           IL+QLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGSFVD+   TGLDKAVI PGKG
Sbjct: 118 ILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGSFVDDQPVTGLDKAVIAPGKG 177

Query: 614 LRSALGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPISE 793
            RSALGLSEGGPLFGFTK+NELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPI+E
Sbjct: 178 FRSALGLSEGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPINE 237

Query: 794 IEPLVLFNVVFFFIAAINPGTGKFVITDDEE 886
           IEPLVLFNVVFFFIAAINPGTGKFV  DDEE
Sbjct: 238 IEPLVLFNVVFFFIAAINPGTGKFVSDDDEE 268


>ref|NP_001105228.1| photosystem II subunit PsbS1 [Zea mays]
 gb|AAQ55066.1| photosystem II subunit PsbS precursor [Zea mays]
          Length = 265

 Score =  394 bits (1013), Expect = e-108
 Identities = 212/259 (81%), Positives = 230/259 (88%), Gaps = 7/259 (2%)
 Frame = +2

Query: 131 GRSL--LHAVRPTPLSRLVL---SSQPSYYKHTPSLSVKTVALFGGKSKTKAAPARKAEA 295
           GR+L  L AVRP P  RL L   SS  + Y+H+ S+SVKT+ALFG KSK K APA+KA A
Sbjct: 8   GRALPSLQAVRPAPYPRLPLPSSSSSSAGYRHSKSVSVKTLALFG-KSKVKTAPAKKAAA 66

Query: 296 -KPKVKTEDGIFGTSGGIGFTKENELFVGRVAMLGFAASILGEAITGKGILSQLNLETGI 472
            KPK K EDGIFGTSGGIGFTKENELFVGRVAMLGFAAS+LGEAITGKGIL+QLNLETGI
Sbjct: 67  PKPKPKVEDGIFGTSGGIGFTKENELFVGRVAMLGFAASLLGEAITGKGILAQLNLETGI 126

Query: 473 PIYEAEPLLLFFILFTLLGAIGALGDRGSFVD-ETTGLDKAVIPPGKGLRSALGLSEGGP 649
           PIYEAEPLLLFFILFTLLGAIGALGDRG FVD E TGLDKAVI PGKG R ALGLSEGGP
Sbjct: 127 PIYEAEPLLLFFILFTLLGAIGALGDRGRFVDEEVTGLDKAVIQPGKGFRGALGLSEGGP 186

Query: 650 LFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPISEIEPLVLFNVVFF 829
           LFGFTKSNELFVGR+AQLG+AFSIIGEIITGKGALAQLNIETGVPI+EIEPLV+FNV+FF
Sbjct: 187 LFGFTKSNELFVGRMAQLGVAFSIIGEIITGKGALAQLNIETGVPINEIEPLVIFNVLFF 246

Query: 830 FIAAINPGTGKFVITDDEE 886
           FIAAINPG G+F+I ++EE
Sbjct: 247 FIAAINPGNGRFIIGEEEE 265


>emb|CAO61870.1| unnamed protein product [Vitis vinifera]
          Length = 270

 Score =  377 bits (967), Expect = e-103
 Identities = 208/274 (75%), Positives = 230/274 (83%), Gaps = 6/274 (2%)
 Frame = +2

Query: 83  MAQSML-TSSASGVAA---SGRSLLHAVRPTPLSRLVLSSQPSYYKHTPSLSVKTVALFG 250
           MAQ+ML T S SG +      + LL  +RP P S L+L   P+    T S +  T+ALF 
Sbjct: 1   MAQTMLITPSVSGHSVLDLKRQPLLQRLRPKPFSHLLLPPLPTS-SSTSSPAFTTLALF- 58

Query: 251 GKSKTKAAPARKAEAKPKVKTEDGIFGTSGGIGFTKENELFVGRVAMLGFAASILGEAIT 430
            KSKTKAAP++K   KPK + EDGIFGTSGGIGFTK+NELFVGRVAMLGFAAS+LGEAIT
Sbjct: 59  -KSKTKAAPSKKV-TKPKPQVEDGIFGTSGGIGFTKKNELFVGRVAMLGFAASLLGEAIT 116

Query: 431 GKGILSQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGSFVDET--TGLDKAVIPP 604
           GKGIL+QLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRG FVD+   TG++ AVIPP
Sbjct: 117 GKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVDDDPPTGIEGAVIPP 176

Query: 605 GKGLRSALGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVP 784
           GKGLRSALGL EGGPLFGFTKSNELFVGRLAQLGI FSIIGEIITGKGALAQLNIETGVP
Sbjct: 177 GKGLRSALGLREGGPLFGFTKSNELFVGRLAQLGIVFSIIGEIITGKGALAQLNIETGVP 236

Query: 785 ISEIEPLVLFNVVFFFIAAINPGTGKFVITDDEE 886
           IS+IEPLVLFNV+FFF AA+NPG+GKFV  D+EE
Sbjct: 237 ISDIEPLVLFNVIFFFFAALNPGSGKFVTDDEEE 270


>gb|ABC59515.1| chloroplast photosystem II 22 kDa component [Nicotiana benthamiana]
          Length = 274

 Score =  376 bits (965), Expect = e-102
 Identities = 203/277 (73%), Positives = 226/277 (81%), Gaps = 9/277 (3%)
 Frame = +2

Query: 83  MAQSML-TSSASGVAASGRSLLHAVRPTPLSRLVLSSQPSYYKHTPSLSVK-----TVAL 244
           MAQ+ML T++A     +   L+  ++P PLS   L S P  Y    S S       TVAL
Sbjct: 1   MAQTMLLTANAKVDLRNKEPLVERLKPKPLSSFFLPSLPLKYPSASSSSSSHFTSTTVAL 60

Query: 245 FGGKSKTKAAPARKAEAKPKVKTEDGIFGTSGGIGFTKENELFVGRVAMLGFAASILGEA 424
           F  K+K   APA+K   KPK K EDGIFGTSGGIGFTK+NELFVGRVAM+GFAAS+LGEA
Sbjct: 61  FKSKAK---APAKKVVPKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEA 117

Query: 425 ITGKGILSQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGSFVDE---TTGLDKAV 595
           ITGKGIL+QLNLETGIPIYEAEPLLLFFILF LLGAIGALGDRG F+D+    TGLDKAV
Sbjct: 118 ITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGDRGKFIDDPVPATGLDKAV 177

Query: 596 IPPGKGLRSALGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIET 775
           IPPGKG +SALGLSEGGPLFGFTK+NELFVGRLAQLGIAFSIIGEIITGKGALAQLN ET
Sbjct: 178 IPPGKGFKSALGLSEGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLNFET 237

Query: 776 GVPISEIEPLVLFNVVFFFIAAINPGTGKFVITDDEE 886
           GVPI+EIEPL+LFN+VFFF+AAINPGTGKFV  ++EE
Sbjct: 238 GVPINEIEPLLLFNIVFFFVAAINPGTGKFVTDEEEE 274


>gb|ABC59516.1| chloroplast photosystem II 22 kDa component [Nicotiana benthamiana]
          Length = 277

 Score =  374 bits (961), Expect = e-102
 Identities = 204/280 (72%), Positives = 226/280 (80%), Gaps = 12/280 (4%)
 Frame = +2

Query: 83  MAQSML-TSSASGVAASGRSLLHAVRPTPLSRLVLSSQPSYYKHTPSLSVK--------T 235
           MAQ+ML T++A     S  SL+  ++P PLS   L S    Y    S S          T
Sbjct: 1   MAQTMLLTANAKVDLRSKESLVERLKPKPLSSFFLPSLSLKYPSASSSSSSSSSHFTSTT 60

Query: 236 VALFGGKSKTKAAPARKAEAKPKVKTEDGIFGTSGGIGFTKENELFVGRVAMLGFAASIL 415
           VALF  K+K   APA+K   KPK K EDGIFGTSGGIGFTK+NELFVGRVAM+GFAAS+L
Sbjct: 61  VALFKSKAK---APAKKVVPKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLL 117

Query: 416 GEAITGKGILSQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGSFVDETT---GLD 586
           GEAITGKGIL+QLNLETGIPIYEAEPLLLFFILF LLGAIGALGDRG F+D+ T   GLD
Sbjct: 118 GEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGDRGKFIDDPTPPTGLD 177

Query: 587 KAVIPPGKGLRSALGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLN 766
           KAVIPPGKG +SALGLSEGGPLFGFTK+NELFVGRLAQLGIAFSIIGEIITGKGALAQLN
Sbjct: 178 KAVIPPGKGFKSALGLSEGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 237

Query: 767 IETGVPISEIEPLVLFNVVFFFIAAINPGTGKFVITDDEE 886
            ETGVPI+EIEPL+LFN+VFFF+AAINPGTGKFV  ++EE
Sbjct: 238 FETGVPINEIEPLLLFNIVFFFVAAINPGTGKFVTDEEEE 277