BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphylf023p04
         (839 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001066604.1| Os12g0291100 [Oryza sativa (japonica cultiva...   287   6e-76
ref|NP_001066607.1| Os12g0292400 [Oryza sativa (japonica cultiva...   286   8e-76
ref|NP_001066606.1| Os12g0291400 [Oryza sativa (japonica cultiva...   286   1e-75
ref|NP_001066559.1| Os12g0274700 [Oryza sativa (japonica cultiva...   285   2e-75
gb|EAY97115.1| hypothetical protein OsI_018348 [Oryza sativa (in...   284   4e-75

>ref|NP_001066604.1| Os12g0291100 [Oryza sativa (japonica cultivar-group)]
 sp|P18566|RBS2_ORYSJ Ribulose bisphosphate carboxylase small chain A, chloroplast
           precursor (RuBisCO small subunit A)
 gb|AAR19268.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           [Oryza sativa (japonica cultivar-group)]
 gb|ABA97169.1| Ribulose bisphosphate carboxylase small chain A, chloroplast
           precursor, putative, expressed [Oryza sativa (japonica
           cultivar-group)]
 gb|ABG21974.1| Ribulose bisphosphate carboxylase small chain A, chloroplast
           precursor, putative, expressed [Oryza sativa (japonica
           cultivar-group)]
 gb|ABG21975.1| Ribulose bisphosphate carboxylase small chain A, chloroplast
           precursor, putative, expressed [Oryza sativa (japonica
           cultivar-group)]
 dbj|BAF29623.1| Os12g0291100 [Oryza sativa (japonica cultivar-group)]
 gb|ABR25686.1| ribulose bisphosphate carboxylase small chain c [Oryza sativa
           (indica cultivar-group)]
          Length = 175

 Score =  287 bits (734), Expect = 6e-76
 Identities = 138/174 (79%), Positives = 146/174 (83%)
 Frame = +2

Query: 62  MAPTVMASSAISVAPFQGLKSTAXXXXXXXXXXXXXXXXXXXXRIRCMQVWPIVGIKKFE 241
           MAPTVMASSA SVAPFQGLKSTA                    RI+CMQVWPI GIKKFE
Sbjct: 1   MAPTVMASSATSVAPFQGLKSTAGLPVSRRSTNSGFGNVSNGGRIKCMQVWPIEGIKKFE 60

Query: 242 TLSYLPPLSQEDLLKQIEYLIRNNWIPCLEFSKVGFVYRENNRSPGYYDGRYWTMWKLPM 421
           TLSYLPPL+ EDLLKQIEYL+R+ W+PCLEFSKVGFVYREN+RSPGYYDGRYWTMWKLPM
Sbjct: 61  TLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYYDGRYWTMWKLPM 120

Query: 422 FGCTDASQVLKEVSEVNKEYPDAFVRIIGFDNVRQVQLISFIAYKPPGCEESGG 583
           FGCTDA+QVLKE+ E  K YPDAFVRIIGFDNVRQVQLISFIAYKPPGCEESGG
Sbjct: 121 FGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPGCEESGG 174


>ref|NP_001066607.1| Os12g0292400 [Oryza sativa (japonica cultivar-group)]
 gb|ABA97179.1| Ribulose bisphosphate carboxylase small chain C, chloroplast
           precursor, putative, expressed [Oryza sativa (japonica
           cultivar-group)]
 gb|ABA97180.1| Ribulose bisphosphate carboxylase small chain C, chloroplast
           precursor, putative, expressed [Oryza sativa (japonica
           cultivar-group)]
 dbj|BAF29626.1| Os12g0292400 [Oryza sativa (japonica cultivar-group)]
 gb|EAZ20216.1| hypothetical protein OsJ_034425 [Oryza sativa (japonica
           cultivar-group)]
 gb|ABR25478.1| ribulose bisphosphate carboxylase small chain c [Oryza sativa
           (indica cultivar-group)]
          Length = 175

 Score =  286 bits (733), Expect = 8e-76
 Identities = 138/174 (79%), Positives = 146/174 (83%)
 Frame = +2

Query: 62  MAPTVMASSAISVAPFQGLKSTAXXXXXXXXXXXXXXXXXXXXRIRCMQVWPIVGIKKFE 241
           MAP+VMASSA SVAPFQGLKSTA                    RIRCMQVWPI GIKKFE
Sbjct: 1   MAPSVMASSATSVAPFQGLKSTAGLPVNRRSSSSSFGNVSNGGRIRCMQVWPIEGIKKFE 60

Query: 242 TLSYLPPLSQEDLLKQIEYLIRNNWIPCLEFSKVGFVYRENNRSPGYYDGRYWTMWKLPM 421
           TLSYLPPL+ EDLLKQIEYL+R+ W+PCLEFSKVGFVYREN+RSPGYYDGRYWTMWKLPM
Sbjct: 61  TLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYYDGRYWTMWKLPM 120

Query: 422 FGCTDASQVLKEVSEVNKEYPDAFVRIIGFDNVRQVQLISFIAYKPPGCEESGG 583
           FGCTDA+QVLKE+ E  K YPDAFVRIIGFDNVRQVQLISFIAYKPPGCEESGG
Sbjct: 121 FGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPGCEESGG 174


>ref|NP_001066606.1| Os12g0291400 [Oryza sativa (japonica cultivar-group)]
 gb|ABA97173.1| Ribulose bisphosphate carboxylase small chain A, chloroplast
           precursor, putative, expressed [Oryza sativa (japonica
           cultivar-group)]
 gb|ABG21973.1| Ribulose bisphosphate carboxylase small chain A, chloroplast
           precursor, putative, expressed [Oryza sativa (japonica
           cultivar-group)]
 dbj|BAF29625.1| Os12g0291400 [Oryza sativa (japonica cultivar-group)]
 gb|EAZ20214.1| hypothetical protein OsJ_034423 [Oryza sativa (japonica
           cultivar-group)]
          Length = 175

 Score =  286 bits (731), Expect = 1e-75
 Identities = 138/174 (79%), Positives = 145/174 (83%)
 Frame = +2

Query: 62  MAPTVMASSAISVAPFQGLKSTAXXXXXXXXXXXXXXXXXXXXRIRCMQVWPIVGIKKFE 241
           MAPTVMASSA SVAPFQGLKSTA                    RI CMQVWPI GIKKFE
Sbjct: 1   MAPTVMASSATSVAPFQGLKSTAGLPVSRRSNSAGLGSVSNGGRISCMQVWPIEGIKKFE 60

Query: 242 TLSYLPPLSQEDLLKQIEYLIRNNWIPCLEFSKVGFVYRENNRSPGYYDGRYWTMWKLPM 421
           TLSYLPPL+ EDLLKQIEYL+R+ W+PCLEFSKVGFVYREN+RSPGYYDGRYWTMWKLPM
Sbjct: 61  TLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYYDGRYWTMWKLPM 120

Query: 422 FGCTDASQVLKEVSEVNKEYPDAFVRIIGFDNVRQVQLISFIAYKPPGCEESGG 583
           FGCTDA+QVLKE+ E  K YPDAFVRIIGFDNVRQVQLISFIAYKPPGCEESGG
Sbjct: 121 FGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPGCEESGG 174


>ref|NP_001066559.1| Os12g0274700 [Oryza sativa (japonica cultivar-group)]
 sp|Q0INY7|RBS1_ORYSJ Ribulose bisphosphate carboxylase small chain, chloroplast
           precursor (RuBisCO small subunit) (Ribulose bisphosphate
           carboxylase small chain C) (RuBisCO small subunit C)
 sp|A2Y205|RBS1_ORYSI Ribulose bisphosphate carboxylase small chain, chloroplast
           precursor (RuBisCO small subunit) (Ribulose bisphosphate
           carboxylase small chain C) (RuBisCO small subunit C)
 dbj|BAA00538.1| small subunit of ribulose-1,5-bisphosphate carboxylase [Oryza
           sativa Japonica Group]
 gb|AAB70544.1| ribulose 1,5-bisphosphate carboxylase small subunit [Oryza sativa]
 gb|ABA97056.1| Ribulose bisphosphate carboxylase small chain C, chloroplast
           precursor, putative, expressed [Oryza sativa (japonica
           cultivar-group)]
 dbj|BAF29578.1| Os12g0274700 [Oryza sativa (japonica cultivar-group)]
 gb|EAZ33426.1| hypothetical protein OsJ_016909 [Oryza sativa (japonica
           cultivar-group)]
 gb|ABR25908.1| chloroplast ribulose bisphosphate carboxylase small chain precursor
           [Oryza sativa (indica cultivar-group)]
 prf||1508256A ribulose bisphosphate carboxylase S
          Length = 175

 Score =  285 bits (730), Expect = 2e-75
 Identities = 137/174 (78%), Positives = 146/174 (83%)
 Frame = +2

Query: 62  MAPTVMASSAISVAPFQGLKSTAXXXXXXXXXXXXXXXXXXXXRIRCMQVWPIVGIKKFE 241
           MAP+VMASSA +VAPFQGLKSTA                    RIRCMQVWPI GIKKFE
Sbjct: 1   MAPSVMASSATTVAPFQGLKSTAGMPVARRSGNSSFGNVSNGGRIRCMQVWPIEGIKKFE 60

Query: 242 TLSYLPPLSQEDLLKQIEYLIRNNWIPCLEFSKVGFVYRENNRSPGYYDGRYWTMWKLPM 421
           TLSYLPPL+ EDLLKQIEYL+R+ W+PCLEFSKVGFVYREN+RSPGYYDGRYWTMWKLPM
Sbjct: 61  TLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYYDGRYWTMWKLPM 120

Query: 422 FGCTDASQVLKEVSEVNKEYPDAFVRIIGFDNVRQVQLISFIAYKPPGCEESGG 583
           FGCTDA+QVLKE+ E  K YPDAFVRIIGFDNVRQVQLISFIAYKPPGCEESGG
Sbjct: 121 FGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPGCEESGG 174


>gb|EAY97115.1| hypothetical protein OsI_018348 [Oryza sativa (indica
           cultivar-group)]
          Length = 175

 Score =  284 bits (727), Expect = 4e-75
 Identities = 136/174 (78%), Positives = 146/174 (83%)
 Frame = +2

Query: 62  MAPTVMASSAISVAPFQGLKSTAXXXXXXXXXXXXXXXXXXXXRIRCMQVWPIVGIKKFE 241
           MAP+VMASSA +VAPFQGLKSTA                    RIRCMQVWPI GIKKFE
Sbjct: 1   MAPSVMASSATTVAPFQGLKSTAGMPVARRSGNSSFGNVSNGGRIRCMQVWPIEGIKKFE 60

Query: 242 TLSYLPPLSQEDLLKQIEYLIRNNWIPCLEFSKVGFVYRENNRSPGYYDGRYWTMWKLPM 421
           TLSYLPPL+ EDLLKQIEYL+R+ W+PCLEFSKVGFVYREN++SPGYYDGRYWTMWKLPM
Sbjct: 61  TLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHKSPGYYDGRYWTMWKLPM 120

Query: 422 FGCTDASQVLKEVSEVNKEYPDAFVRIIGFDNVRQVQLISFIAYKPPGCEESGG 583
           FGCTDA+QVLKE+ E  K YPDAFVRIIGFDNVRQVQLISFIAYKPPGCEESGG
Sbjct: 121 FGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPGCEESGG 174