BLASTX 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphylf003o18 (1673 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 5,815,196 sequences; 2,006,227,497 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001061885.1| Os08g0436000 [Oryza sativa (japonica cultiva... 853 0.0 gb|ABK95931.1| unknown [Populus trichocarpa] 643 0.0 ref|NP_001050223.1| Os03g0376900 [Oryza sativa (japonica cultiva... 626 e-177 gb|EAY90221.1| hypothetical protein OsI_011454 [Oryza sativa (in... 606 e-171 gb|ABB55397.1| polypyrimidine tract-binding protein-like [Solanu... 594 e-168 >ref|NP_001061885.1| Os08g0436000 [Oryza sativa (japonica cultivar-group)] dbj|BAD10638.1| putative polypyrimidine tract-binding protein homolog [Oryza sativa (japonica cultivar-group)] dbj|BAF23799.1| Os08g0436000 [Oryza sativa (japonica cultivar-group)] Length = 461 Score = 853 bits (2205), Expect = 0.0 Identities = 423/469 (90%), Positives = 435/469 (92%), Gaps = 2/469 (0%) Frame = +1 Query: 163 MPSGSATQFRYTHTPSKVLHLRNMPWECTEEELVDLCKPFGRVVNTMCNVGANRNQAFVE 342 MPSGSATQFRYT TPSKVLHLRNMPWECTEEELV+LCKPFGRVVNTMCNVGANRNQAFVE Sbjct: 1 MPSGSATQFRYTQTPSKVLHLRNMPWECTEEELVELCKPFGRVVNTMCNVGANRNQAFVE 60 Query: 343 FVDQNQAISMVSYYASSSEPAQVRGKTVYIQYSNRQEITNNKGTGDSSGNVLLVTFEGVQ 522 F DQNQAISMVSYYASSSEPAQVRGKTVYIQYSNRQEITNNKGTGDSSGNVLLVTFEGVQ Sbjct: 61 FADQNQAISMVSYYASSSEPAQVRGKTVYIQYSNRQEITNNKGTGDSSGNVLLVTFEGVQ 120 Query: 523 PNDISIDVIHLVFSAFGYVHKVATFEKAAGFQALIQYTDAPTALEAKNSLDGRSIPRYLL 702 PNDISIDVIHLVFSAFG+VHK+ATFEKAAGFQALIQYTDAPTALEAKNSLDGRSIPRYLL Sbjct: 121 PNDISIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNSLDGRSIPRYLL 180 Query: 703 PEHVSTCHLRITFSAHKDLNIKFQSHRSRDYTNPYLPVNPTAIEGIVQPTLGPDGKIKEP 882 PEHV TCHLRITFSAHKDLNIKFQSHRSRDYTNPYLPVNPTAIEGI QPTLGPDGKIKEP Sbjct: 181 PEHVPTCHLRITFSAHKDLNIKFQSHRSRDYTNPYLPVNPTAIEGIAQPTLGPDGKIKEP 240 Query: 883 ESNVLLASIENMQYAVTVDVLHTVFSAFGTTQKIAMFEKNGGMQALIQYPDITTAAVAKQ 1062 ESNVLLASIENMQYAVTVDVLHTVFSAFGT QKIAMFEKNGGMQALIQYPDITTAAVAKQ Sbjct: 241 ESNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAMFEKNGGMQALIQYPDITTAAVAKQ 300 Query: 1063 ALEGHCIYDGGYCKLHLSYSRHTDLNVKAHDERSRDYTI-SDPTAQVQAAGQAPGLGTPG 1239 ALEGHCIYDGGYCKLHLSYSRHTDLNVKAHDERSRDYT+ SDP+AQ+QAA QAPG TPG Sbjct: 301 ALEGHCIYDGGYCKLHLSYSRHTDLNVKAHDERSRDYTVSSDPSAQMQAAAQAPGPSTPG 360 Query: 1240 IVPSAQVQAAWQNTAPAASFYASTAAATPVGQVPAWNPNMQPGASASASAPYPTQPLMAS 1419 + AWQNTAP+ASFY STAAATPVGQVPAWNPNMQ GA SAS+ YPTQP+M Sbjct: 361 V--------AWQNTAPSASFYGSTAAATPVGQVPAWNPNMQAGAFGSASSAYPTQPMMPG 412 Query: 1420 FVPHYPASGSSSGAPPVSYQASPHMPQYGIPPAPP-HAPSASQPMYFPK 1563 VPHYP GSSSGA PVS+QAS MPQYG+PPA P HAP A QPMYFPK Sbjct: 413 SVPHYPGIGSSSGALPVSFQASHQMPQYGVPPAAPHHAPPAGQPMYFPK 461 >gb|ABK95931.1| unknown [Populus trichocarpa] Length = 473 Score = 643 bits (1658), Expect = 0.0 Identities = 334/483 (69%), Positives = 370/483 (76%), Gaps = 18/483 (3%) Frame = +1 Query: 163 MPSGSATQFRYTHTPSKVLHLRNMPWECTEEELVDLCKPFGRVVNTMCNVGANRNQAFVE 342 M + QFRYT TPSKVLHLRN+PWECTEEEL++LCKPFGR+VNT CNVGANRNQAFVE Sbjct: 1 MSTSGQPQFRYTQTPSKVLHLRNLPWECTEEELIELCKPFGRIVNTKCNVGANRNQAFVE 60 Query: 343 FVDQNQAISMVSYYASSSEPAQVRGKTVYIQYSNRQEITNNKGTGDSSGNVLLVTFEGVQ 522 FVDQNQAI MVSYYASSS+PAQVRGKTVYIQYSNR EI NNK GD+ GNVLLVT EGV+ Sbjct: 61 FVDQNQAIQMVSYYASSSDPAQVRGKTVYIQYSNRHEIVNNKSPGDNPGNVLLVTIEGVE 120 Query: 523 PNDISIDVIHLVFSAFGYVHKVATFEKAAGFQALIQYTDAPTALEAKNSLDGRSIPRYLL 702 D+SIDVIHLVFSAFGY+HK+ATFEKAAGFQALIQ+TD+ TA A+N+LDGRSIPRYLL Sbjct: 121 AGDVSIDVIHLVFSAFGYLHKIATFEKAAGFQALIQFTDSETASSARNALDGRSIPRYLL 180 Query: 703 PEHVSTCHLRITFSAHKDLNIKFQSHRSRDYTNPYLPVNPTAIEGIVQPTLGPDGKIKEP 882 PEHV +CHLRI++SAH DLNIKFQSHRSRDYTNPYLPVNPTAIEG VQPT+G DGK KEP Sbjct: 181 PEHVGSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAIEGPVQPTVGADGKKKEP 240 Query: 883 ESNVLLASIENMQYAVTVDVLHTVFSAFGTTQKIAMFEKNGGMQALIQYPDITTAAVAKQ 1062 ESNVLLASIENMQYAVT+DVLHTVFSAFGT QKIA+FEKNGG QALIQYPD+ TAAVAK+ Sbjct: 241 ESNVLLASIENMQYAVTIDVLHTVFSAFGTVQKIAIFEKNGGTQALIQYPDVATAAVAKE 300 Query: 1063 ALEGHCIYDGGYCKLHLSYSRHTDLNVKAHDERSRDYTISDPTAQVQAAGQAPGLGTPGI 1242 LEGHCIYDGGYCKLHLSYSRHTDLNVKA+ ++SRDYTI D + A QAPGL T Sbjct: 301 TLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTIPDASL---IAAQAPGLHT--- 354 Query: 1243 VPSAQVQAAWQNTAPAASF----YASTAAA---TPVGQVPAWNPNMQPGASASASAP--- 1392 WQN + + YA+TAA P GQVPAW+P MQ G AS P Sbjct: 355 -----APTMWQNPQAGSMYTGNNYATTAAVPVQVPPGQVPAWDPTMQAGGQGYASVPGTY 409 Query: 1393 ----YPTQPLMASFVPHYPASGS-SSGAPPVSYQ-ASPHMPQYGIPP--APPHAPSASQP 1548 YPT P A PA S S + P+S+ AS M G+ P A QP Sbjct: 410 PGQTYPTPPASAYATAAIPAGSSPRSHSSPISHSVASMAMSHPGMQSNLRPSGASPPGQP 469 Query: 1549 MYF 1557 Y+ Sbjct: 470 PYY 472 >ref|NP_001050223.1| Os03g0376900 [Oryza sativa (japonica cultivar-group)] gb|AAL82531.1|AC084766_17 putative polypyrimidine tract-binding protein [Oryza sativa] gb|ABF96228.1| Polypyrimidine tract-binding protein, putative, expressed [Oryza sativa (japonica cultivar-group)] dbj|BAF12137.1| Os03g0376900 [Oryza sativa (japonica cultivar-group)] Length = 464 Score = 626 bits (1614), Expect = e-177 Identities = 329/469 (70%), Positives = 360/469 (76%), Gaps = 10/469 (2%) Frame = +1 Query: 172 GSATQFRYTHTPSKVLHLRNMPWECTEEELVDLCKPFGRVVNTMCNVGANRNQAFVEFVD 351 G QFRYT TPSKVLHLRN+PWEC EEELV+LC PFGR+VNT C VGANRNQAFVEF D Sbjct: 8 GGGQQFRYTQTPSKVLHLRNLPWECAEEELVELCNPFGRIVNTKCGVGANRNQAFVEFTD 67 Query: 352 QNQAISMVSYYASSSEPAQVRGKTVYIQYSNRQEITNNKGTGDSSGNVLLVTFEGVQPND 531 NQAISMVSY+ASSSEPAQ+RGKTVYIQYSNRQEI NNK G+++GNVLLVT EGVQ ND Sbjct: 68 INQAISMVSYFASSSEPAQIRGKTVYIQYSNRQEIVNNKSPGETAGNVLLVTIEGVQAND 127 Query: 532 ISIDVIHLVFSAFGYVHKVATFEKAAGFQALIQYTDAPTALEAKNSLDGRSIPRYLLPEH 711 ++IDVIHLVFSAFG+VHK+ATFEKAAGFQALIQYTDA TA A+ +LDGRSIPRYLLPEH Sbjct: 128 VTIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAATASAAREALDGRSIPRYLLPEH 187 Query: 712 VSTCHLRITFSAHKDLNIKFQSHRSRDYTNPYLPVNPTAIEGIVQPTLGPDGKIKEPESN 891 V++C LRI+FSAHKDLNIKFQSHRSRDYTNPYLPVN +AI+ +QP +G DG+ E E N Sbjct: 188 VTSCCLRISFSAHKDLNIKFQSHRSRDYTNPYLPVNSSAID-TLQPAVGADGRKVEAEGN 246 Query: 892 VLLASIENMQYAVTVDVLHTVFSAFGTTQKIAMFEKNGGMQALIQYPDITTAAVAKQALE 1071 VLLASIENMQYAVTVDVLHTVFSAFGT QKIA+FEKNGG QALIQYPD+TTA+VAK+ALE Sbjct: 247 VLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGGTQALIQYPDVTTASVAKEALE 306 Query: 1072 GHCIYDGGYCKLHLSYSRHTDLNVKAHDERSRDYTISDPTAQVQAAGQAPGLGTPGIVPS 1251 GHCIYDGGYCKLHLSYSRHTDLNVKAH ++SRDYTI P +QA Q PG+ T Sbjct: 307 GHCIYDGGYCKLHLSYSRHTDLNVKAHSDKSRDYTI--PQGAMQAVPQPPGVPT------ 358 Query: 1252 AQVQAAWQNTAPAASFYASTAAATP----VGQVPAWNPNMQPGASASASAP--YPTQPLM 1413 A WQ A YA AA P GQVP WN PG S A AP YP Q M Sbjct: 359 --TSAGWQGNPQAGGAYAPPGAAAPNHGTTGQVPNWN----PGNSGYAPAPGAYPGQ--M 410 Query: 1414 ASFVPHYPASG--SSSGAPPVSYQASPHM--PQYGIPPAPPHAPSASQP 1548 S Y ASG S+ APP S M PQYG P P AP QP Sbjct: 411 YSSPMQYGASGGFSAPAAPPQELHTSQQMPPPQYGNQPGPAGAPGTGQP 459 >gb|EAY90221.1| hypothetical protein OsI_011454 [Oryza sativa (indica cultivar-group)] gb|EAZ27103.1| hypothetical protein OsJ_010586 [Oryza sativa (japonica cultivar-group)] Length = 504 Score = 606 bits (1563), Expect = e-171 Identities = 329/509 (64%), Positives = 360/509 (70%), Gaps = 50/509 (9%) Frame = +1 Query: 172 GSATQFRYTHTPSKVLHLRNMPWECTEEELVDLCKPFGRVVNTMCNVGANRNQAFVEFV- 348 G QFRYT TPSKVLHLRN+PWEC EEELV+LC PFGR+VNT C VGANRNQAFVEF Sbjct: 8 GGGQQFRYTQTPSKVLHLRNLPWECAEEELVELCNPFGRIVNTKCGVGANRNQAFVEFTS 67 Query: 349 ---------------------------------------DQNQAISMVSYYASSSEPAQV 411 D NQAISMVSY+ASSSEPAQ+ Sbjct: 68 RKGFQKLYLPTNSIIVYTYVLFVINAAHYLCKAIPSLQTDINQAISMVSYFASSSEPAQI 127 Query: 412 RGKTVYIQYSNRQEITNNKGTGDSSGNVLLVTFEGVQPNDISIDVIHLVFSAFGYVHKVA 591 RGKTVYIQYSNRQEI NNK G+++GNVLLVT EGVQ ND++IDVIHLVFSAFG+VHK+A Sbjct: 128 RGKTVYIQYSNRQEIVNNKSPGETAGNVLLVTIEGVQANDVTIDVIHLVFSAFGFVHKIA 187 Query: 592 TFEKAAGFQALIQYTDAPTALEAKNSLDGRSIPRYLLPEHVSTCHLRITFSAHKDLNIKF 771 TFEKAAGFQALIQYTDA TA A+ +LDGRSIPRYLLPEHV++C LRI+FSAHKDLNIKF Sbjct: 188 TFEKAAGFQALIQYTDAATASAAREALDGRSIPRYLLPEHVTSCCLRISFSAHKDLNIKF 247 Query: 772 QSHRSRDYTNPYLPVNPTAIEGIVQPTLGPDGKIKEPESNVLLASIENMQYAVTVDVLHT 951 QSHRSRDYTNPYLPVN +AI+ +QP +G DG+ E E NVLLASIENMQYAVTVDVLHT Sbjct: 248 QSHRSRDYTNPYLPVNSSAID-TLQPAVGADGRKVEAEGNVLLASIENMQYAVTVDVLHT 306 Query: 952 VFSAFGTTQKIAMFEKNGGMQALIQYPDITTAAVAKQALEGHCIYDGGYCKLHLSYSRHT 1131 VFSAFGT QKIA+FEKNGG QALIQYPD+TTA+VAK+ALEGHCIYDGGYCKLHLSYSRHT Sbjct: 307 VFSAFGTVQKIAIFEKNGGTQALIQYPDVTTASVAKEALEGHCIYDGGYCKLHLSYSRHT 366 Query: 1132 DLNVKAHDERSRDYTISDPTAQVQAAGQAPGLGTPGIVPSAQVQAAWQNTAPAASFYAST 1311 DLNVKAH ++SRDYTI P +QA Q PG+ T A WQ A YA Sbjct: 367 DLNVKAHSDKSRDYTI--PQGAMQAVPQPPGVPT--------TSAGWQGNPQAGGAYAPP 416 Query: 1312 AAATP----VGQVPAWNPNMQPGASASASAP--YPTQPLMASFVPHYPASG--SSSGAPP 1467 AA P GQVP WN PG S A AP YP Q M S Y ASG S+ APP Sbjct: 417 GAAAPNHGTTGQVPNWN----PGNSGYAPAPGAYPGQ--MYSSPMQYGASGGFSAPAAPP 470 Query: 1468 VSYQASPHM--PQYGIPPAPPHAPSASQP 1548 S M PQYG P P AP QP Sbjct: 471 QELHTSQQMPPPQYGNQPGPAGAPGTGQP 499 >gb|ABB55397.1| polypyrimidine tract-binding protein-like [Solanum tuberosum] Length = 442 Score = 594 bits (1532), Expect = e-168 Identities = 305/450 (67%), Positives = 351/450 (78%), Gaps = 6/450 (1%) Frame = +1 Query: 163 MPSGSATQFRYTHTPSKVLHLRNMPWECTEEELVDLCKPFGRVVNTMCNVGANRNQAFVE 342 M + QFRYT TPSKVLHLRN+PW+C++EELV+LCKPFG++VNT CNVGANRNQAFVE Sbjct: 1 MSTSGQQQFRYTQTPSKVLHLRNLPWDCSDEELVELCKPFGKIVNTKCNVGANRNQAFVE 60 Query: 343 FVDQNQAISMVSYYASSSEPAQVRGKTVYIQYSNRQEITNNKGTGDSSGNVLLVTFEGVQ 522 F D NQAI+MVSYYASSSEPAQVRGKTVYIQYSNR EI NNK GD GNVLLVT EGV+ Sbjct: 61 FADLNQAINMVSYYASSSEPAQVRGKTVYIQYSNRNEIVNNKSPGDVPGNVLLVTIEGVE 120 Query: 523 PNDISIDVIHLVFSAFGYVHKVATFEKAAGFQALIQYTDAPTALEAKNSLDGRSIPRYLL 702 D+SIDVIHLVFSAFG+V K+ATFEKAAGFQALIQ++D TA A+ +LDGRSIP+YLL Sbjct: 121 AGDVSIDVIHLVFSAFGFVQKIATFEKAAGFQALIQFSDVGTASAAREALDGRSIPKYLL 180 Query: 703 PEHVSTCHLRITFSAHKDLNIKFQSHRSRDYTNPYLPVNPTAIEGIVQPTLGPDGKIKEP 882 PEHV+ CHLRI++SAH DLNIKFQSHRSRDYTNPYLPVNPTA+EG++QP +GPDGK KEP Sbjct: 181 PEHVNHCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAMEGVLQPVVGPDGKKKEP 240 Query: 883 ESNVLLASIENMQYAVTVDVLHTVFSAFGTTQKIAMFEKNGGMQALIQYPDITTAAVAKQ 1062 ESNVL AS+ENMQYAVTVDVL+TVFSAFGT QKIA+FEKNG QALIQYPD+T AA AK Sbjct: 241 ESNVLFASLENMQYAVTVDVLNTVFSAFGTVQKIAIFEKNGQTQALIQYPDVTIAAAAKD 300 Query: 1063 ALEGHCIYDGGYCKLHLSYSRHTDLNVKAHDERSRDYTISDPTAQVQAAGQAPGL-GTPG 1239 ALEGHCIYDGGYCKLHLSYSRHTDLNV+A+ ++SRDYT+ P + + A QA + TP Sbjct: 301 ALEGHCIYDGGYCKLHLSYSRHTDLNVQAYSDKSRDYTV--PESSLLAMQQASAVHATPP 358 Query: 1240 IVPSAQVQAAWQN--TAPAASFYASTAAATPVGQV-PAWNPNMQPGASASASAP--YPTQ 1404 + W N + P S T GQ PAWNPN+Q G S SAP YP Sbjct: 359 V---------WHNPQSGPVQSSAGYATTGTVPGQAPPAWNPNLQGGGSTFPSAPTGYPGH 409 Query: 1405 PLMASFVPHYPASGSSSGAPPVSYQASPHM 1494 S+ P PA +++ PP S Q + H+ Sbjct: 410 ----SYAPPAPAY-ATAVHPPGSSQQTNHI 434