BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphylf003h20
         (941 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001053226.1| Os04g0501000 [Oryza sativa (japonica cultiva...   195   3e-48
gb|EAY94740.1| hypothetical protein OsI_015973 [Oryza sativa (in...   195   4e-48
gb|EAY94744.1| hypothetical protein OsI_015977 [Oryza sativa (in...   194   7e-48
emb|CAC09511.2| H0711G06.17 [Oryza sativa (indica cultivar-group...   194   7e-48
pdb|2GO5|4 Chain 4, Structure Of Signal Recognition Particle Rec...   192   3e-47

>ref|NP_001053226.1| Os04g0501000 [Oryza sativa (japonica cultivar-group)]
 emb|CAE01636.3| OSJNBa0029H02.21 [Oryza sativa (japonica cultivar-group)]
 dbj|BAF15140.1| Os04g0501000 [Oryza sativa (japonica cultivar-group)]
          Length = 192

 Score =  195 bits (496), Expect = 3e-48
 Identities = 108/170 (63%), Positives = 112/170 (65%)
 Frame = +2

Query: 14  APPPPGRGKFKRLS*EXXXXXXXXXXXXGDVKSQALXXXXXXXXXXXXXXXXXXRTSVTF 193
           A PP     FKR   E            GD K+QAL                  RTSVTF
Sbjct: 28  ASPP-----FKRQPCEAPMAPKAAPAKKGDAKAQALKAAKAVKSGTAKKTTKKIRTSVTF 82

Query: 194 HRPKTQKKARNPKYPRISTPGRNKLDQYQILKYPLTTESAMKKIEDNNTLVFXXXXXXXX 373
           HRPKT KK+R+PKYPR+STPGRNKLDQYQILKYPLTTESAMKKIEDNNTLVF        
Sbjct: 83  HRPKTLKKSRDPKYPRVSTPGRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDLKADK 142

Query: 374 XXXXXXXXXMYDIQAKKVNTLIRPDGKKKAYVKLTPDYDALDVANKIGII 523
                    MYDIQAKKVNTLIRPDGKKKAYVKLTPDYDALDVANKIGII
Sbjct: 143 KKIKAAVKKMYDIQAKKVNTLIRPDGKKKAYVKLTPDYDALDVANKIGII 192


>gb|EAY94740.1| hypothetical protein OsI_015973 [Oryza sativa (indica
           cultivar-group)]
          Length = 162

 Score =  195 bits (495), Expect = 4e-48
 Identities = 105/161 (65%), Positives = 109/161 (67%)
 Frame = +2

Query: 41  FKRLS*EXXXXXXXXXXXXGDVKSQALXXXXXXXXXXXXXXXXXXRTSVTFHRPKTQKKA 220
           FKR   E            GD K+QAL                  RTSVTFHRPKT KK+
Sbjct: 2   FKRQPCEAPMAPKAAPAKKGDAKAQALKAAKAVKSGTAKKTTKKIRTSVTFHRPKTLKKS 61

Query: 221 RNPKYPRISTPGRNKLDQYQILKYPLTTESAMKKIEDNNTLVFXXXXXXXXXXXXXXXXX 400
           R+PKYPR+STPGRNKLDQYQILKYPLTTESAMKKIEDNNTLVF                 
Sbjct: 62  RDPKYPRVSTPGRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDLKADKKKIKAAVKK 121

Query: 401 MYDIQAKKVNTLIRPDGKKKAYVKLTPDYDALDVANKIGII 523
           MYDIQAKKVNTLIRPDGKKKAYVKLTPDYDALDVANKIGII
Sbjct: 122 MYDIQAKKVNTLIRPDGKKKAYVKLTPDYDALDVANKIGII 162


>gb|EAY94744.1| hypothetical protein OsI_015977 [Oryza sativa (indica
           cultivar-group)]
          Length = 164

 Score =  194 bits (493), Expect = 7e-48
 Identities = 101/142 (71%), Positives = 105/142 (73%)
 Frame = +2

Query: 98  GDVKSQALXXXXXXXXXXXXXXXXXXRTSVTFHRPKTQKKARNPKYPRISTPGRNKLDQY 277
           GD K+QAL                  RTSVTFHRPKT KK+R+PKYPR+STPGRNKLDQY
Sbjct: 23  GDAKAQALKAAKAVKSGTAKKTTKKIRTSVTFHRPKTLKKSRDPKYPRVSTPGRNKLDQY 82

Query: 278 QILKYPLTTESAMKKIEDNNTLVFXXXXXXXXXXXXXXXXXMYDIQAKKVNTLIRPDGKK 457
           QILKYPLTTESAMKKIEDNNTLVF                 MYDIQAKKVNTLIRPDGKK
Sbjct: 83  QILKYPLTTESAMKKIEDNNTLVFIVDLKADKKKIKAAVKKMYDIQAKKVNTLIRPDGKK 142

Query: 458 KAYVKLTPDYDALDVANKIGII 523
           KAYVKLTPDYDALDVANKIGII
Sbjct: 143 KAYVKLTPDYDALDVANKIGII 164


>emb|CAC09511.2| H0711G06.17 [Oryza sativa (indica cultivar-group)]
 emb|CAH67548.1| H0311C03.2 [Oryza sativa (indica cultivar-group)]
          Length = 152

 Score =  194 bits (493), Expect = 7e-48
 Identities = 101/142 (71%), Positives = 105/142 (73%)
 Frame = +2

Query: 98  GDVKSQALXXXXXXXXXXXXXXXXXXRTSVTFHRPKTQKKARNPKYPRISTPGRNKLDQY 277
           GD K+QAL                  RTSVTFHRPKT KK+R+PKYPR+STPGRNKLDQY
Sbjct: 11  GDAKAQALKAAKAVKSGTAKKTTKKIRTSVTFHRPKTLKKSRDPKYPRVSTPGRNKLDQY 70

Query: 278 QILKYPLTTESAMKKIEDNNTLVFXXXXXXXXXXXXXXXXXMYDIQAKKVNTLIRPDGKK 457
           QILKYPLTTESAMKKIEDNNTLVF                 MYDIQAKKVNTLIRPDGKK
Sbjct: 71  QILKYPLTTESAMKKIEDNNTLVFIVDLKADKKKIKAAVKKMYDIQAKKVNTLIRPDGKK 130

Query: 458 KAYVKLTPDYDALDVANKIGII 523
           KAYVKLTPDYDALDVANKIGII
Sbjct: 131 KAYVKLTPDYDALDVANKIGII 152


>pdb|2GO5|4 Chain 4, Structure Of Signal Recognition Particle Receptor (Sr) In
           Complex With Signal Recognition Particle (Srp) And
           Ribosome Nascent Chain Complex
 pdb|2J37|4 Chain 4, Model Of Mammalian Srp Bound To 80s Rncs
          Length = 152

 Score =  192 bits (487), Expect = 3e-47
 Identities = 101/142 (71%), Positives = 103/142 (72%)
 Frame = +2

Query: 98  GDVKSQALXXXXXXXXXXXXXXXXXXRTSVTFHRPKTQKKARNPKYPRISTPGRNKLDQY 277
           GD K+QA                   RTSVTFHRPKT  KAR+PKYPRISTPGRNKLDQY
Sbjct: 11  GDAKAQAAKVAKAVKSGSIKKTAKKIRTSVTFHRPKTLSKARDPKYPRISTPGRNKLDQY 70

Query: 278 QILKYPLTTESAMKKIEDNNTLVFXXXXXXXXXXXXXXXXXMYDIQAKKVNTLIRPDGKK 457
           QILKYPLTTESAMKKIEDNNTLVF                 MYDIQAKKVNTLIRPDGKK
Sbjct: 71  QILKYPLTTESAMKKIEDNNTLVFIVDLKADKKKIKAAVKKMYDIQAKKVNTLIRPDGKK 130

Query: 458 KAYVKLTPDYDALDVANKIGII 523
           KAYVKLTPDYDALDVANKIGII
Sbjct: 131 KAYVKLTPDYDALDVANKIGII 152