BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphylf002f03
         (706 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001044402.1| Os01g0773700 [Oryza sativa (japonica cultiva...   166   2e-39
gb|EAY98643.1| hypothetical protein OsI_019876 [Oryza sativa (in...   152   1e-35
sp|Q41387|PSBW_SPIOL Photosystem II reaction center W protein, c...   127   8e-28
emb|CAO70652.1| unnamed protein product [Vitis vinifera]              126   1e-27
gb|ABL97943.1| component of 6.1 kDa polypeptide of photosystem I...   125   2e-27

>ref|NP_001044402.1| Os01g0773700 [Oryza sativa (japonica cultivar-group)]
 sp|Q5ZBY9|PSBW_ORYSJ Photosystem II reaction center W protein, chloroplast precursor
           (PSII 6.1 kDa protein)
 dbj|BAD52944.1| putative photosystem II reaction center W protein [Oryza sativa
           (japonica cultivar-group)]
 dbj|BAF06316.1| Os01g0773700 [Oryza sativa (japonica cultivar-group)]
 gb|EAY76000.1| hypothetical protein OsI_003847 [Oryza sativa (indica
           cultivar-group)]
          Length = 124

 Score =  166 bits (419), Expect = 2e-39
 Identities = 91/131 (69%), Positives = 105/131 (80%), Gaps = 1/131 (0%)
 Frame = +3

Query: 111 MATISAATATTIVARPAVARPSQAQGLPQLRVR-AEKVRCSYSKNAKEAASPAVVNGASL 287
           MAT+SAA AT++VAR  +A P    GLPQ+R R +E+VRC+YSK A   A+     GASL
Sbjct: 1   MATVSAAAATSVVARAVLAGPL---GLPQMRARRSERVRCNYSKEAATPAAAVKGAGASL 57

Query: 288 LAAASAMTVSAAPALALVDERMSTEGTGLSLGLSNNLLGWILLGMFGLIWSLYTVYTSTL 467
           LA    M  +AAPA+ALVDERMSTEGTGLSLGLSNNLLGWILLG+FGLIWSLYT+YTS L
Sbjct: 58  LA----MAATAAPAMALVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTIYTSDL 113

Query: 468 DEDEESGGLSL 500
           +EDEESGGLSL
Sbjct: 114 EEDEESGGLSL 124


>gb|EAY98643.1| hypothetical protein OsI_019876 [Oryza sativa (indica
           cultivar-group)]
 gb|EAZ34886.1| hypothetical protein OsJ_018369 [Oryza sativa (japonica
           cultivar-group)]
          Length = 128

 Score =  152 bits (385), Expect = 1e-35
 Identities = 91/136 (66%), Positives = 105/136 (77%), Gaps = 6/136 (4%)
 Frame = +3

Query: 111 MATISAATA--TTIVARPAVARPSQAQGLPQLRVR-AEKVRCSYS-KNAKEAASPAVVNG 278
           MATI+AA A  T +V RP+        G+ QLR R  E+VRC YS ++ KEA   A V G
Sbjct: 1   MATIAAAAAARTAVVGRPS--------GVAQLRARRGERVRCGYSSRDGKEATPAAAVKG 52

Query: 279 A-SLLAAASAMTVSAAPA-LALVDERMSTEGTGLSLGLSNNLLGWILLGMFGLIWSLYTV 452
           A S+LAAA   + S+APA +ALVDERMSTEGTGLSLGLSNNLLGWILLG+FGLIWSLYTV
Sbjct: 53  ATSMLAAAVTASSSSAPAAMALVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTV 112

Query: 453 YTSTLDEDEESGGLSL 500
           YTSTLD+D+ESGGLSL
Sbjct: 113 YTSTLDDDDESGGLSL 128


>sp|Q41387|PSBW_SPIOL Photosystem II reaction center W protein, chloroplast precursor
           (PSII 6.1 kDa protein)
 emb|CAA59409.1| protein of photosystem II [Spinacia oleracea]
          Length = 137

 Score =  127 bits (318), Expect = 8e-28
 Identities = 74/136 (54%), Positives = 92/136 (67%), Gaps = 10/136 (7%)
 Frame = +3

Query: 111 MATISAATATTIVARPAVARPSQAQ-------GLPQLRVRAEKVRCSYSKNAKEAASPAV 269
           MATI+A+++ ++VAR ++   S+         GLP +  R+ KV CS         +   
Sbjct: 1   MATITASSSASLVARASLVHNSRVGVSSSPILGLPSMTKRS-KVTCSIENKPSTTETTTT 59

Query: 270 VN---GASLLAAASAMTVSAAPALALVDERMSTEGTGLSLGLSNNLLGWILLGMFGLIWS 440
            N   GASLLAAA+A T+S  PA+ALVDERMSTEGTGL  GLSNNLLGWIL G+FGLIW+
Sbjct: 60  TNKSMGASLLAAAAAATISN-PAMALVDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWA 118

Query: 441 LYTVYTSTLDEDEESG 488
           LY VY S L+EDEESG
Sbjct: 119 LYFVYASGLEEDEESG 134


>emb|CAO70652.1| unnamed protein product [Vitis vinifera]
          Length = 135

 Score =  126 bits (316), Expect = 1e-27
 Identities = 71/133 (53%), Positives = 90/133 (67%), Gaps = 7/133 (5%)
 Frame = +3

Query: 111 MATISAATATTIVARPAVARP------SQAQGLPQLRVRAEKVRC-SYSKNAKEAASPAV 269
           MATI+A+   T + R +VA        S   GLP +  +  +VRC S  K        ++
Sbjct: 1   MATITASNPATSLVRASVASKGLNGISSPVLGLPAMAKKG-RVRCMSEEKPCGSDMGSSI 59

Query: 270 VNGASLLAAASAMTVSAAPALALVDERMSTEGTGLSLGLSNNLLGWILLGMFGLIWSLYT 449
             GASL+AAA+A+  SA PA+ALVDER+STEGTGL  GLSNNLLGWIL G+FGLIW+LY 
Sbjct: 60  SMGASLMAAAAAVAASAGPAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALYF 119

Query: 450 VYTSTLDEDEESG 488
            YT+TL+ED+ESG
Sbjct: 120 TYTATLEEDDESG 132


>gb|ABL97943.1| component of 6.1 kDa polypeptide of photosystem II reaction center
           [Brassica rapa]
          Length = 133

 Score =  125 bits (314), Expect = 2e-27
 Identities = 72/132 (54%), Positives = 86/132 (65%), Gaps = 6/132 (4%)
 Frame = +3

Query: 111 MATISAATATTIVARPA------VARPSQAQGLPQLRVRAEKVRCSYSKNAKEAASPAVV 272
           MA+ +A+ +T  VARPA      VA  +   GLP +  R   VRCS     K+    AV 
Sbjct: 1   MASFTASASTVSVARPALLLKPTVAVSAPVLGLPPMGKRKGGVRCSMEP--KQGNVSAVG 58

Query: 273 NGASLLAAASAMTVSAAPALALVDERMSTEGTGLSLGLSNNLLGWILLGMFGLIWSLYTV 452
            G S  A A+   V + PA+ALVD+RMSTEGTGL  GLSNNLLGWILLG+FGLIW+ Y  
Sbjct: 59  AGVSAAATAALTAVMSNPAMALVDDRMSTEGTGLPFGLSNNLLGWILLGVFGLIWTFYFT 118

Query: 453 YTSTLDEDEESG 488
           YTS+LDEDEESG
Sbjct: 119 YTSSLDEDEESG 130