BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphylf002d16
         (707 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O22386|RK12_ORYSJ 50S ribosomal protein L12, chloroplast prec...   268   3e-70
gb|EAZ12985.1| hypothetical protein OsJ_002810 [Oryza sativa (ja...   265   2e-69
sp|Q06030|RK121_SECCE 50S ribosomal protein L12-1, chloroplast p...   254   3e-66
sp|Q06036|RK122_SECCE 50S ribosomal protein L12-2, chloroplast p...   251   4e-65
emb|CAA48400.1| ribosomal protein L12 [Secale cereale]                243   6e-63

>sp|O22386|RK12_ORYSJ 50S ribosomal protein L12, chloroplast precursor (CL12)
 dbj|BAA37171.1| ribosomal protein L12 [Oryza sativa (japonica cultivar-group)]
          Length = 185

 Score =  268 bits (684), Expect = 3e-70
 Identities = 155/185 (83%), Positives = 163/185 (88%), Gaps = 6/185 (3%)
 Frame = +2

Query: 71  MASTTLSPAFSLLSLPSSSPYPSASLT--RTLPVPRR---RRAVAV-ASTATESPKVLEL 232
           MAST LS AFSLLSLPSSS   +A+    R+  VP R   RRAVAV ASTATESPKVLEL
Sbjct: 1   MASTALSSAFSLLSLPSSSSPAAAAAAAPRSFAVPSRARPRRAVAVVASTATESPKVLEL 60

Query: 233 GDAIAGLTLEEARSLVDHLQDRLGVSAAAFAPAAVVAAPGAAAAGAAEEAAPAEKTEFDV 412
           GDAIAGLTLEEAR LVDHLQ+RLGVSAAAFAPAAVVAAPGA  AGAA + APAEKTEFDV
Sbjct: 61  GDAIAGLTLEEARGLVDHLQERLGVSAAAFAPAAVVAAPGAGGAGAAADEAPAEKTEFDV 120

Query: 413 VIEEVPSSARIATIKVVRALTSLALKEAKDLIEGLPKKLKEAVSKDEAEDAKKQLEEVGA 592
           VIEEVPSSARIA+IKVVRALT+LALKEAKDLIEGLPKK+KE VSKDEAEDAKKQLEEVGA
Sbjct: 121 VIEEVPSSARIASIKVVRALTNLALKEAKDLIEGLPKKVKEGVSKDEAEDAKKQLEEVGA 180

Query: 593 KVSIA 607
           KVSIA
Sbjct: 181 KVSIA 185


>gb|EAZ12985.1| hypothetical protein OsJ_002810 [Oryza sativa (japonica
           cultivar-group)]
          Length = 185

 Score =  265 bits (676), Expect = 2e-69
 Identities = 153/185 (82%), Positives = 163/185 (88%), Gaps = 6/185 (3%)
 Frame = +2

Query: 71  MASTTLSPAFSLLSLPSSSPYPSASLT--RTLPVPRR---RRAVAV-ASTATESPKVLEL 232
           MAST LS AFSLLSLPSSS   +A+    R+  VP R   RRAVAV ASTATESPKVLEL
Sbjct: 1   MASTALSSAFSLLSLPSSSSPAAAAAAAPRSFAVPSRARPRRAVAVVASTATESPKVLEL 60

Query: 233 GDAIAGLTLEEARSLVDHLQDRLGVSAAAFAPAAVVAAPGAAAAGAAEEAAPAEKTEFDV 412
           GDAIAGLTLEEAR LVDHLQ+RLGVSAAAFAPAAVVAAPGA+A G+  + APAEKTEFDV
Sbjct: 61  GDAIAGLTLEEARGLVDHLQERLGVSAAAFAPAAVVAAPGASAPGSRADEAPAEKTEFDV 120

Query: 413 VIEEVPSSARIATIKVVRALTSLALKEAKDLIEGLPKKLKEAVSKDEAEDAKKQLEEVGA 592
           VIEEVPSSARIA+IKVVRALT+LALKEAKDLIEGLPKK+KE VSKDEAEDAKKQLEEVGA
Sbjct: 121 VIEEVPSSARIASIKVVRALTNLALKEAKDLIEGLPKKVKEGVSKDEAEDAKKQLEEVGA 180

Query: 593 KVSIA 607
           KVSIA
Sbjct: 181 KVSIA 185


>sp|Q06030|RK121_SECCE 50S ribosomal protein L12-1, chloroplast precursor (CL12-1)
          Length = 174

 Score =  254 bits (649), Expect = 3e-66
 Identities = 146/180 (81%), Positives = 154/180 (85%), Gaps = 1/180 (0%)
 Frame = +2

Query: 71  MASTTLSPAFSLLSLPSSSPYPSASLTRTLPVP-RRRRAVAVASTATESPKVLELGDAIA 247
           MASTT S AFS+LSLPSSSP P  S  RTLPV  RRRRA AVASTATESPKVLELGDAIA
Sbjct: 1   MASTTFSSAFSILSLPSSSPSPPPSPPRTLPVANRRRRAAAVASTATESPKVLELGDAIA 60

Query: 248 GLTLEEARSLVDHLQDRLGVSAAAFAPAAVVAAPGAAAAGAAEEAAPAEKTEFDVVIEEV 427
           GLTLEEAR+LVDHLQ+RL VSAA+F PAA      A    AA E AP E+TEFDVVIEEV
Sbjct: 61  GLTLEEARNLVDHLQERLCVSAASFPPAA------AGLRAAAVEEAPVEQTEFDVVIEEV 114

Query: 428 PSSARIATIKVVRALTSLALKEAKDLIEGLPKKLKEAVSKDEAEDAKKQLEEVGAKVSIA 607
           PSSARIATIK+VRALT+LALKEAKDLIEGLPKKLKEAVSKDEAE+AKKQLE VGAKVSIA
Sbjct: 115 PSSARIATIKIVRALTNLALKEAKDLIEGLPKKLKEAVSKDEAEEAKKQLEGVGAKVSIA 174


>sp|Q06036|RK122_SECCE 50S ribosomal protein L12-2, chloroplast precursor (CL12-2)
 emb|CAA48414.1| ribosomal protein L12 [Secale cereale]
          Length = 174

 Score =  251 bits (640), Expect = 4e-65
 Identities = 144/180 (80%), Positives = 152/180 (84%), Gaps = 1/180 (0%)
 Frame = +2

Query: 71  MASTTLSPAFSLLSLPSSSPYPSASLTRTLPVP-RRRRAVAVASTATESPKVLELGDAIA 247
           MASTT S AFS+LSLPSSSP P     RTLPV  RRRRA AVAST TESPKVLELGDAIA
Sbjct: 1   MASTTFSSAFSILSLPSSSPSPPPWAPRTLPVANRRRRAAAVASTVTESPKVLELGDAIA 60

Query: 248 GLTLEEARSLVDHLQDRLGVSAAAFAPAAVVAAPGAAAAGAAEEAAPAEKTEFDVVIEEV 427
           GLTLEEAR+LVDHLQ+RL VSAA+F PAA      A    AA E AP E+TEFDVVIEEV
Sbjct: 61  GLTLEEARNLVDHLQERLCVSAASFPPAA------AGLRAAAVEEAPVEQTEFDVVIEEV 114

Query: 428 PSSARIATIKVVRALTSLALKEAKDLIEGLPKKLKEAVSKDEAEDAKKQLEEVGAKVSIA 607
           PSSARIATIK+VRALT+LALKEAKDLIEGLPKKLKEAVSKDEAE+AKKQLE VGAKVSIA
Sbjct: 115 PSSARIATIKIVRALTNLALKEAKDLIEGLPKKLKEAVSKDEAEEAKKQLEGVGAKVSIA 174


>emb|CAA48400.1| ribosomal protein L12 [Secale cereale]
          Length = 177

 Score =  243 bits (621), Expect = 6e-63
 Identities = 139/176 (78%), Positives = 148/176 (84%), Gaps = 1/176 (0%)
 Frame = +2

Query: 56  PKNSAMASTTLSPAFSLLSLPSSSPYPSASLTRTLPVP-RRRRAVAVASTATESPKVLEL 232
           P+   MASTT S AFS+LSLPSSSP P  S  RTLPV  RRRRA AVASTATESPKVLEL
Sbjct: 8   PQELPMASTTFSSAFSILSLPSSSPSPPPSPPRTLPVANRRRRAAAVASTATESPKVLEL 67

Query: 233 GDAIAGLTLEEARSLVDHLQDRLGVSAAAFAPAAVVAAPGAAAAGAAEEAAPAEKTEFDV 412
           GDAIAGLTLEEAR+LVDHLQ+RL VSAA+F PAA      A    AA E AP E+TEFDV
Sbjct: 68  GDAIAGLTLEEARNLVDHLQERLCVSAASFPPAA------AGLRAAAVEEAPVEQTEFDV 121

Query: 413 VIEEVPSSARIATIKVVRALTSLALKEAKDLIEGLPKKLKEAVSKDEAEDAKKQLE 580
           VIEEVPSSARIATIK+VRALT+LALKEAKDLIEGLPKKLKEAVSKDEAE+AKKQLE
Sbjct: 122 VIEEVPSSARIATIKIVRALTNLALKEAKDLIEGLPKKLKEAVSKDEAEEAKKQLE 177