BLASTX 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem212l24 (1948 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 5,815,196 sequences; 2,006,227,497 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001051082.1| Os03g0717600 [Oryza sativa (japonica cultiva... 564 0.0 gb|ABF98562.1| Splicing factor 3A subunit 3, putative, expressed... 564 e-166 ref|NP_196234.3| splicing factor-related [Arabidopsis thaliana] ... 437 e-162 emb|CAO48518.1| unnamed protein product [Vitis vinifera] 443 e-161 gb|EDQ57930.1| predicted protein [Physcomitrella patens subsp. p... 414 e-150 >ref|NP_001051082.1| Os03g0717600 [Oryza sativa (japonica cultivar-group)] gb|ABF98561.1| Splicing factor 3A subunit 3, putative, expressed [Oryza sativa (japonica cultivar-group)] dbj|BAF12996.1| Os03g0717600 [Oryza sativa (japonica cultivar-group)] gb|EAY91658.1| hypothetical protein OsI_012891 [Oryza sativa (indica cultivar-group)] gb|EAZ28378.1| hypothetical protein OsJ_011861 [Oryza sativa (japonica cultivar-group)] Length = 507 Score = 564 bits (1453), Expect(3) = 0.0 Identities = 279/357 (78%), Positives = 297/357 (83%) Frame = +1 Query: 682 ITHSLKATRQYREYLGHILEYLTSFLYRTEPLQDLAKIFTKLESEFEEQWANGEVSGWEN 861 + +LK +RQYREYL HILEYLTSFLY TEPLQD+ KIF KLESEFEEQW NGEV GWE+ Sbjct: 170 MAQNLKTSRQYREYLEHILEYLTSFLYHTEPLQDIEKIFAKLESEFEEQWINGEVPGWES 229 Query: 862 KGAERESAPQESLIDLDYYSTIEELVELGPEKLKEDLAARGLKSGGTVEQRAERLFLLKH 1041 K E+ESA QES+IDLDYY+T+EELVELGPEKLKE LAARGLKSGGTV+QRAERLFLLKH Sbjct: 230 KDPEKESA-QESVIDLDYYTTVEELVELGPEKLKEALAARGLKSGGTVQQRAERLFLLKH 288 Query: 1042 TPLEQLDRKHFAKCPRSSVSNAPSNGNNFKDDLKKEIALLEVKMRRLCELLDEVIVRTKE 1221 TPLEQLDRKHFAK SSVSNA SNGNNFKD+LKKEIAL+EVKMRRLCELLDE+IVRTKE Sbjct: 289 TPLEQLDRKHFAKGSHSSVSNATSNGNNFKDNLKKEIALMEVKMRRLCELLDEIIVRTKE 348 Query: 1222 NAEKKLTLTYXXXXXXXXXXXXXXXXXXXXXXXQIYNPLKLPMGWDGKPIPYWLYKLHGL 1401 NAEKKLTLTY QIYNPLKLPMGWDGKPIPYWLYK Sbjct: 349 NAEKKLTLTYEEMEAEREEEEVQADSESDDEDQQIYNPLKLPMGWDGKPIPYWLYK---- 404 Query: 1402 GQVI*SCRYYWLYKLHGLGQEFKCEICGNHSYWGRRAYERHFKEWLHQHGMRCLGIPNTK 1581 LHGLGQEFKCEICGNHSYWGRRAYERHFKEW HQHGMRCLGIPNTK Sbjct: 405 --------------LHGLGQEFKCEICGNHSYWGRRAYERHFKEWRHQHGMRCLGIPNTK 450 Query: 1582 NFNEITTIQEAKDLWGKIQERQGVNKWRPDLEEEYEDREGNIYNKKTYTDLQRQGLI 1752 NFNEIT+IQEAK+LW KIQ+RQG+NKWRPDLEEEYED+EGNIYNKKTYTDLQRQGLI Sbjct: 451 NFNEITSIQEAKELWEKIQQRQGLNKWRPDLEEEYEDQEGNIYNKKTYTDLQRQGLI 507 Score = 219 bits (558), Expect(3) = 0.0 Identities = 111/131 (84%), Positives = 120/131 (91%), Gaps = 3/131 (2%) Frame = +3 Query: 189 MASTVLEATRAAHED---LERLAVRELQREPANARDRLFQSHRVGHMLDLIVSTSDKLVE 359 MASTVLEATRA HED LERLAVRELQREPANARDRL+QSHRV HMLDL++STS KLVE Sbjct: 1 MASTVLEATRAKHEDMERLERLAVRELQREPANARDRLYQSHRVRHMLDLVISTSGKLVE 60 Query: 360 IYEDKDNARKDDISTHLYAQVQSDIFNKFYDRLKEIRDYHRRNPSARFVSATDDYEELLK 539 IYEDKDNARKD+IS HL + VQ++IF KFYDRLKEIRDYHRRNPSARFVSATDD+EELLK Sbjct: 61 IYEDKDNARKDEISNHLSSTVQAEIFPKFYDRLKEIRDYHRRNPSARFVSATDDFEELLK 120 Query: 540 EEPVIEFTGED 572 EEP IEFTGE+ Sbjct: 121 EEPAIEFTGEE 131 Score = 47.0 bits (110), Expect(3) = 0.0 Identities = 21/23 (91%), Positives = 21/23 (91%) Frame = +2 Query: 611 EAFGWYLDLHESYNEFINSKFGT 679 EAFG YLDLHE YNEFINSKFGT Sbjct: 131 EAFGRYLDLHELYNEFINSKFGT 153 >gb|ABF98562.1| Splicing factor 3A subunit 3, putative, expressed [Oryza sativa (japonica cultivar-group)] Length = 378 Score = 564 bits (1453), Expect(2) = e-166 Identities = 279/357 (78%), Positives = 297/357 (83%) Frame = +1 Query: 682 ITHSLKATRQYREYLGHILEYLTSFLYRTEPLQDLAKIFTKLESEFEEQWANGEVSGWEN 861 + +LK +RQYREYL HILEYLTSFLY TEPLQD+ KIF KLESEFEEQW NGEV GWE+ Sbjct: 41 MAQNLKTSRQYREYLEHILEYLTSFLYHTEPLQDIEKIFAKLESEFEEQWINGEVPGWES 100 Query: 862 KGAERESAPQESLIDLDYYSTIEELVELGPEKLKEDLAARGLKSGGTVEQRAERLFLLKH 1041 K E+ESA QES+IDLDYY+T+EELVELGPEKLKE LAARGLKSGGTV+QRAERLFLLKH Sbjct: 101 KDPEKESA-QESVIDLDYYTTVEELVELGPEKLKEALAARGLKSGGTVQQRAERLFLLKH 159 Query: 1042 TPLEQLDRKHFAKCPRSSVSNAPSNGNNFKDDLKKEIALLEVKMRRLCELLDEVIVRTKE 1221 TPLEQLDRKHFAK SSVSNA SNGNNFKD+LKKEIAL+EVKMRRLCELLDE+IVRTKE Sbjct: 160 TPLEQLDRKHFAKGSHSSVSNATSNGNNFKDNLKKEIALMEVKMRRLCELLDEIIVRTKE 219 Query: 1222 NAEKKLTLTYXXXXXXXXXXXXXXXXXXXXXXXQIYNPLKLPMGWDGKPIPYWLYKLHGL 1401 NAEKKLTLTY QIYNPLKLPMGWDGKPIPYWLYK Sbjct: 220 NAEKKLTLTYEEMEAEREEEEVQADSESDDEDQQIYNPLKLPMGWDGKPIPYWLYK---- 275 Query: 1402 GQVI*SCRYYWLYKLHGLGQEFKCEICGNHSYWGRRAYERHFKEWLHQHGMRCLGIPNTK 1581 LHGLGQEFKCEICGNHSYWGRRAYERHFKEW HQHGMRCLGIPNTK Sbjct: 276 --------------LHGLGQEFKCEICGNHSYWGRRAYERHFKEWRHQHGMRCLGIPNTK 321 Query: 1582 NFNEITTIQEAKDLWGKIQERQGVNKWRPDLEEEYEDREGNIYNKKTYTDLQRQGLI 1752 NFNEIT+IQEAK+LW KIQ+RQG+NKWRPDLEEEYED+EGNIYNKKTYTDLQRQGLI Sbjct: 322 NFNEITSIQEAKELWEKIQQRQGLNKWRPDLEEEYEDQEGNIYNKKTYTDLQRQGLI 378 Score = 48.9 bits (115), Expect(2) = e-166 Identities = 22/24 (91%), Positives = 22/24 (91%) Frame = +2 Query: 608 MEAFGWYLDLHESYNEFINSKFGT 679 MEAFG YLDLHE YNEFINSKFGT Sbjct: 1 MEAFGRYLDLHELYNEFINSKFGT 24 >ref|NP_196234.3| splicing factor-related [Arabidopsis thaliana] dbj|BAB09681.1| splicing factor 3a [Arabidopsis thaliana] gb|AAK64048.1| putative splicing factor 3a [Arabidopsis thaliana] gb|AAM44910.1| putative splicing factor 3a protein [Arabidopsis thaliana] Length = 504 Score = 437 bits (1123), Expect(3) = e-162 Identities = 221/358 (61%), Positives = 260/358 (72%), Gaps = 1/358 (0%) Frame = +1 Query: 682 ITHSLKATRQYREYLGHILEYLTSFLYRTEPLQDLAKIFTKLESEFEEQWANGEVSGWEN 861 I LK +RQY +Y+ +LEYL F RTEPLQDL +I +K+ S+FEEQ+A+G V G +N Sbjct: 171 IPRKLKLSRQYMKYMEALLEYLVYFFQRTEPLQDLDRILSKVCSDFEEQYADGIVEGLDN 230 Query: 862 KGAERESAP-QESLIDLDYYSTIEELVELGPEKLKEDLAARGLKSGGTVEQRAERLFLLK 1038 E P Q ++IDLDYYST+EELV++GPEKLKE L A GLK GGT +QRAERLFL K Sbjct: 231 -----ELIPSQHTVIDLDYYSTVEELVDVGPEKLKEALGALGLKVGGTPQQRAERLFLTK 285 Query: 1039 HTPLEQLDRKHFAKCPRSSVSNAPSNGNNFKDDLKKEIALLEVKMRRLCELLDEVIVRTK 1218 HTPLE+LD+KHFA+ P + N + + ++ K EIAL E K+++LC LLDE I RTK Sbjct: 286 HTPLEKLDKKHFARPPHNGKQNGDAKSTHESENAK-EIALTEAKVKKLCNLLDETIERTK 344 Query: 1219 ENAEKKLTLTYXXXXXXXXXXXXXXXXXXXXXXXQIYNPLKLPMGWDGKPIPYWLYKLHG 1398 +N KK +LTY IYNPLKLP+GWDGKPIPYWLYK Sbjct: 345 QNIVKKQSLTYEEMEGEREGEEANTELESDDEDGLIYNPLKLPIGWDGKPIPYWLYK--- 401 Query: 1399 LGQVI*SCRYYWLYKLHGLGQEFKCEICGNHSYWGRRAYERHFKEWLHQHGMRCLGIPNT 1578 LHGLGQEFKCEICGN+SYWGRRA+ERHFKEW HQHGMRCLGIPNT Sbjct: 402 ---------------LHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNT 446 Query: 1579 KNFNEITTIQEAKDLWGKIQERQGVNKWRPDLEEEYEDREGNIYNKKTYTDLQRQGLI 1752 KNFNEIT+I+EAK+LW +IQERQGVNKWRP+LEEEYEDREGNIYNKKTY+DLQRQGLI Sbjct: 447 KNFNEITSIEEAKELWKRIQERQGVNKWRPELEEEYEDREGNIYNKKTYSDLQRQGLI 504 Score = 143 bits (361), Expect(3) = e-162 Identities = 73/133 (54%), Positives = 101/133 (75%), Gaps = 5/133 (3%) Frame = +3 Query: 189 MASTVLEATRAAHED---LERLAVRELQREPANARDRLFQSHRVGHMLDLIVSTSDKLVE 359 M+ST+LE TR+ HE+ LERL V +LQ+EP +++DRL Q HRV HM++ I+ T++KLVE Sbjct: 1 MSSTLLEQTRSNHEEVERLERLVVEDLQKEPPSSKDRLVQGHRVRHMIESIMLTTEKLVE 60 Query: 360 IYEDKDNARKDDISTHLYAQVQS--DIFNKFYDRLKEIRDYHRRNPSARFVSATDDYEEL 533 YEDKD A D+I+ L Q + ++F++FYDRLKEIR+YH+R+PS R V A +DYE Sbjct: 61 TYEDKDGAWDDEIAA-LGGQTATGTNVFSEFYDRLKEIREYHKRHPSGRLVDANEDYEAR 119 Query: 534 LKEEPVIEFTGED 572 LKEEP+I F+GE+ Sbjct: 120 LKEEPIIAFSGEE 132 Score = 38.5 bits (88), Expect(3) = e-162 Identities = 16/24 (66%), Positives = 19/24 (79%) Frame = +2 Query: 611 EAFGWYLDLHESYNEFINSKFGTR 682 E G YLDLH+ YN++INSKFG R Sbjct: 132 EGNGRYLDLHDMYNQYINSKFGER 155 >emb|CAO48518.1| unnamed protein product [Vitis vinifera] Length = 512 Score = 443 bits (1139), Expect(2) = e-161 Identities = 228/361 (63%), Positives = 254/361 (70%), Gaps = 4/361 (1%) Frame = +1 Query: 682 ITHSLKATRQYREYLGHILEYLTSFLYRTEPLQDLAKIFTKLESEFEEQWANGEVSGWEN 861 I LK TRQYREYL ++LEYL F RTEPLQDL +IFTKL ++FEEQWANG V GWEN Sbjct: 171 IPRKLKLTRQYREYLENLLEYLIYFFERTEPLQDLDRIFTKLATDFEEQWANGMVEGWEN 230 Query: 862 KGAERESAP-QESLIDLDYYSTIEELVELGPEKLKEDLAARGLKSGGTVEQRAER---LF 1029 + E + P Q + IDLDYYST+EE++E+GPE LKE T+EQR + L+ Sbjct: 231 ESQENGNVPTQHAAIDLDYYSTVEEVMEVGPEMLKEVKIVLSNSFLPTLEQRVQSVPSLY 290 Query: 1030 LLKHTPLEQLDRKHFAKCPRSSVSNAPSNGNNFKDDLKKEIALLEVKMRRLCELLDEVIV 1209 HTPLEQLD+KHFAK R S N + D KEIALLE K+R++CELL E IV Sbjct: 291 SSTHTPLEQLDQKHFAKGSRRSEQNGTPAAPK-EADSSKEIALLEAKLRKICELLYETIV 349 Query: 1210 RTKENAEKKLTLTYXXXXXXXXXXXXXXXXXXXXXXXQIYNPLKLPMGWDGKPIPYWLYK 1389 RTKEN EKK LTY QIYNPLKLPMGWDGKPIPYWLYK Sbjct: 350 RTKENIEKKQALTYEEMEAEREEEEVQADTESDDEEQQIYNPLKLPMGWDGKPIPYWLYK 409 Query: 1390 LHGLGQVI*SCRYYWLYKLHGLGQEFKCEICGNHSYWGRRAYERHFKEWLHQHGMRCLGI 1569 LHGLGQEFKCEICGNHSYWGRRA+ERHFKEW HQHGMRCLGI Sbjct: 410 ------------------LHGLGQEFKCEICGNHSYWGRRAFERHFKEWRHQHGMRCLGI 451 Query: 1570 PNTKNFNEITTIQEAKDLWGKIQERQGVNKWRPDLEEEYEDREGNIYNKKTYTDLQRQGL 1749 PNTKNFNEIT+I+EAK LW +IQERQG+NKWRPDLEEEYED+EGNIYNKKTYTDLQRQGL Sbjct: 452 PNTKNFNEITSIKEAKVLWERIQERQGLNKWRPDLEEEYEDKEGNIYNKKTYTDLQRQGL 511 Query: 1750 I 1752 I Sbjct: 512 I 512 Score = 153 bits (386), Expect(2) = e-161 Identities = 79/133 (59%), Positives = 106/133 (79%), Gaps = 5/133 (3%) Frame = +3 Query: 189 MASTVLEATRAAHED---LERLAVRELQREPANARDRLFQSHRVGHMLDLIVSTSDKLVE 359 M+ST+LE TRA HE+ LERL V++LQ EPA+++DRLFQSHRV +M+D I T++KL++ Sbjct: 1 MSSTLLEVTRAGHEEIERLERLIVKDLQNEPASSKDRLFQSHRVRNMIDTITITTEKLID 60 Query: 360 IYEDKDNARKDDISTHLYAQVQ--SDIFNKFYDRLKEIRDYHRRNPSARFVSATDDYEEL 533 IYEDKDNARKD+I+ L Q +++F+ FYDRLKEIR+YHR++ +AR V A ++YEEL Sbjct: 61 IYEDKDNARKDEIAA-LGGQTATGTNVFSAFYDRLKEIREYHRKHQAARVVDANEEYEEL 119 Query: 534 LKEEPVIEFTGED 572 LKEE IEF GE+ Sbjct: 120 LKEELRIEFRGEE 132 >gb|EDQ57930.1| predicted protein [Physcomitrella patens subsp. patens] Length = 510 Score = 414 bits (1064), Expect(3) = e-150 Identities = 207/365 (56%), Positives = 254/365 (69%), Gaps = 2/365 (0%) Frame = +1 Query: 664 FQVWNTITHSLKATRQYREYLGHILEYLTSFLYRTEPLQDLAKIFTKLESEFEEQWANGE 843 F + I+ ++K ++QY++YL + +YL SF RT+PLQD+ KIF K+ +EFEE+W G Sbjct: 164 FSQTHKISRNVKLSKQYQDYLKSMTDYLLSFFERTQPLQDVDKIFAKVNAEFEERWNAGT 223 Query: 844 VSGWENKG--AERESAPQESLIDLDYYSTIEELVELGPEKLKEDLAARGLKSGGTVEQRA 1017 V GWE+KG E+ S+ + LID++ Y +++EL+ELGP++LKE LAA GLK+GGT QRA Sbjct: 224 VQGWEDKGLGTEQASSRLQPLIDVEDYDSVDELMELGPDRLKEALAALGLKTGGTPRQRA 283 Query: 1018 ERLFLLKHTPLEQLDRKHFAKCPRSSVSNAPSNGNNFKDDLKKEIALLEVKMRRLCELLD 1197 ERLFL K L+ LDRKHF K + ++ + K +AL EVKM+RLCELL Sbjct: 284 ERLFLTKGVALDSLDRKHFPKGYQLPITMKSEKEIAQQVASSKAVALAEVKMQRLCELLQ 343 Query: 1198 EVIVRTKENAEKKLTLTYXXXXXXXXXXXXXXXXXXXXXXXQIYNPLKLPMGWDGKPIPY 1377 E I TK + EKK LTY IYNPLKLPMGWDGKPIPY Sbjct: 344 EAIEETKSHVEKKQALTYEEMEAEREEEEVAQESESEDEEQAIYNPLKLPMGWDGKPIPY 403 Query: 1378 WLYKLHGLGQVI*SCRYYWLYKLHGLGQEFKCEICGNHSYWGRRAYERHFKEWLHQHGMR 1557 WLYK LHGLGQEFKCEICGN+SYWGRRA+ERHFKEW HQHGMR Sbjct: 404 WLYK------------------LHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMR 445 Query: 1558 CLGIPNTKNFNEITTIQEAKDLWGKIQERQGVNKWRPDLEEEYEDREGNIYNKKTYTDLQ 1737 CLGIPNTKNF+EIT+I++AK LW +IQERQGVNKWRPDLEEEYED +GN+YNKKT++DLQ Sbjct: 446 CLGIPNTKNFHEITSIKDAKALWERIQERQGVNKWRPDLEEEYEDLDGNVYNKKTFSDLQ 505 Query: 1738 RQGLI 1752 RQGLI Sbjct: 506 RQGLI 510 Score = 129 bits (323), Expect(3) = e-150 Identities = 69/132 (52%), Positives = 95/132 (71%), Gaps = 4/132 (3%) Frame = +3 Query: 189 MASTVLEATRAAHEDLERLA---VRELQREPANARDRLFQSHRVGHMLDLIVSTSDKLVE 359 M+ T+LE TRA HE+ ERL V+ELQ+E + ++RL Q+HRV +M I+ ++ KLV+ Sbjct: 1 MSGTLLEQTRAFHEECERLERCIVQELQKETKSHKERLHQNHRVNNMRHAILDSTAKLVD 60 Query: 360 IYEDKDNARKDDISTHLYAQVQS-DIFNKFYDRLKEIRDYHRRNPSARFVSATDDYEELL 536 IYEDKD+AR+D+I+ L Q Q + F FY+R KEIR+YHRR+PS R + DD EE L Sbjct: 61 IYEDKDHAREDEIAA-LGGQGQGQNFFTSFYERFKEIREYHRRHPSVREATTADDPEEYL 119 Query: 537 KEEPVIEFTGED 572 KEEP I+F+GE+ Sbjct: 120 KEEPYIDFSGEE 131 Score = 38.5 bits (88), Expect(3) = e-150 Identities = 15/22 (68%), Positives = 19/22 (86%) Frame = +2 Query: 611 EAFGWYLDLHESYNEFINSKFG 676 EA+G YLDLH YN+++NSKFG Sbjct: 131 EAYGRYLDLHALYNQYLNSKFG 152