BLASTX 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem212k23 (1677 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 5,815,196 sequences; 2,006,227,497 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EAY87323.1| hypothetical protein OsI_008556 [Oryza sativa (in... 604 e-171 ref|NP_001047954.1| Os02g0720600 [Oryza sativa (japonica cultiva... 602 e-170 gb|EAY74910.1| hypothetical protein OsI_002757 [Oryza sativa (in... 538 e-151 ref|NP_001043536.1| Os01g0608300 [Oryza sativa (japonica cultiva... 537 e-150 dbj|BAD52835.1| nucleoid DNA-binding protein cnd41-like [Oryza s... 537 e-150 >gb|EAY87323.1| hypothetical protein OsI_008556 [Oryza sativa (indica cultivar-group)] Length = 463 Score = 604 bits (1558), Expect = e-171 Identities = 319/467 (68%), Positives = 360/467 (77%), Gaps = 10/467 (2%) Frame = +2 Query: 77 MASVSQXXXXXXCSYHSLIVRAGHEQSYKVLATDTLKPKPVCSEPKVAPSSSGRATVPLN 256 MASVS CSYHS++ AG QSYKVL L + VCSE SS TV LN Sbjct: 1 MASVSPLLLLLLCSYHSVVAHAGDGQSYKVLE---LNSEAVCSERNAISSSLSGTTVALN 57 Query: 257 HRHGPCSPVPSEKK-PAFAELLRRDQLRAGYVQRKFSKNRA---DGELQQSEVT--VPTT 418 HRHGPCSPVPS KK P ELL+RDQLRA ++QRKF+ N A G+LQQS+V+ VPT Sbjct: 58 HRHGPCSPVPSSKKRPTEEELLKRDQLRAEHIQRKFAMNAAVDGAGDLQQSKVSSSVPTK 117 Query: 419 LGSSLKTLEYVITVGIGSQAVAQTMTIDTGSDVSWVQCNPCPIPPCHSQAGSLFDPSTSS 598 LGSSL TLEYVI+VG+G+ AV QT+TIDTGSDVSWVQCNPCP PPCH+Q G+LFDP+ SS Sbjct: 118 LGSSLDTLEYVISVGLGTPAVTQTVTIDTGSDVSWVQCNPCPNPPCHAQTGALFDPAKSS 177 Query: 599 TYAPFSCGSAACAQLGEAGNGC--SDSQCQYIVRYVNGPNTNGTYGSDTLSLT-ESDVVK 769 TY SC +A CAQL + GNGC ++ +CQY V+Y +G TNGTY DTL+L+ SD VK Sbjct: 178 TYRAVSCAAAECAQLEQQGNGCGATNYECQYGVQYGDGSTTNGTYSRDTLTLSGASDAVK 237 Query: 770 NFQFGCSHTGSGSNDDQTDGLMGLGGDAQSLVSQTAAKYGSTFSYCLPPTPGSSGFLTLG 949 FQFGCSH SG +D QTDGLMGLGG AQSLVSQTAA YG++FSYCLPPT GSSGFLTLG Sbjct: 238 GFQFGCSHLESGFSD-QTDGLMGLGGGAQSLVSQTAAAYGNSFSYCLPPTSGSSGFLTLG 296 Query: 950 APSGASGFATTKMLRSRQAPTFYGVLLQGISVAGKQLSVPTSVFA-GSVMDSGTIITRLP 1126 GASGF TT+MLRS+Q PTFYG LQ I+V GKQL + SVFA GSV+DSGTIITRLP Sbjct: 297 GGGGASGFVTTRMLRSKQIPTFYGARLQDIAVGGKQLGLSPSVFAAGSVVDSGTIITRLP 356 Query: 1127 PTAYSALSSAFKDGMKQYPPAQPRGILDTCFDFTGQDNVTIPSVALVFYGGAVVDLDANG 1306 PTAYSALSSAFK GMKQY A R ILDTCFDF GQ ++IP+VALVF GGA +DLD NG Sbjct: 357 PTAYSALSSAFKAGMKQYRSAPARSILDTCFDFAGQTQISIPTVALVFSGGAAIDLDPNG 416 Query: 1307 IILGSCLAFAATDHDGTTGIIGNVQQRTFEVLYDVGQSVVGFRPGAC 1447 I+ G+CLAFAAT DGTTGIIGNVQQRTFEVLYDVG S +GFR GAC Sbjct: 417 IMYGNCLAFAATGDDGTTGIIGNVQQRTFEVLYDVGSSTLGFRSGAC 463 >ref|NP_001047954.1| Os02g0720600 [Oryza sativa (japonica cultivar-group)] dbj|BAD12876.1| putative 41 kD chloroplast nucleoid DNA binding protein (CND41) [Oryza sativa (japonica cultivar-group)] dbj|BAD12996.1| putative 41 kD chloroplast nucleoid DNA binding protein (CND41) [Oryza sativa (japonica cultivar-group)] dbj|BAF09868.1| Os02g0720600 [Oryza sativa (japonica cultivar-group)] gb|EAZ24423.1| hypothetical protein OsJ_007906 [Oryza sativa (japonica cultivar-group)] Length = 463 Score = 602 bits (1552), Expect = e-170 Identities = 318/467 (68%), Positives = 359/467 (76%), Gaps = 10/467 (2%) Frame = +2 Query: 77 MASVSQXXXXXXCSYHSLIVRAGHEQSYKVLATDTLKPKPVCSEPKVAPSSSGRATVPLN 256 MASVS CSYHS++ AG QSYKVL L + VCSE SS TV LN Sbjct: 1 MASVSPLLLLLLCSYHSVVAHAGDGQSYKVLE---LNSEAVCSERNAISSSLSGTTVALN 57 Query: 257 HRHGPCSPVPSEKK-PAFAELLRRDQLRAGYVQRKFSKNRA---DGELQQSEVT--VPTT 418 HRHGPCSPVPS KK P ELL+RDQLRA ++QRKF+ N A G+LQQS+V+ VPT Sbjct: 58 HRHGPCSPVPSSKKRPTEEELLKRDQLRAEHIQRKFAMNAAVDGAGDLQQSKVSSSVPTK 117 Query: 419 LGSSLKTLEYVITVGIGSQAVAQTMTIDTGSDVSWVQCNPCPIPPCHSQAGSLFDPSTSS 598 LGSSL TLEYVI+VG+G+ AV QT+TIDTGSDVSWVQCNPCP PPC++Q G+LFDP+ SS Sbjct: 118 LGSSLDTLEYVISVGLGTPAVTQTVTIDTGSDVSWVQCNPCPNPPCYAQTGALFDPAKSS 177 Query: 599 TYAPFSCGSAACAQLGEAGNGC--SDSQCQYIVRYVNGPNTNGTYGSDTLSLT-ESDVVK 769 TY SC +A CAQL + GNGC ++ +CQY V+Y +G TNGTY DTL+L+ SD VK Sbjct: 178 TYRAVSCAAAECAQLEQQGNGCGATNYECQYGVQYGDGSTTNGTYSRDTLTLSGASDAVK 237 Query: 770 NFQFGCSHTGSGSNDDQTDGLMGLGGDAQSLVSQTAAKYGSTFSYCLPPTPGSSGFLTLG 949 FQFGCSH SG +D QTDGLMGLGG AQSLVSQTAA YG++FSYCLPPT GSSGFLTLG Sbjct: 238 GFQFGCSHVESGFSD-QTDGLMGLGGGAQSLVSQTAAAYGNSFSYCLPPTSGSSGFLTLG 296 Query: 950 APSGASGFATTKMLRSRQAPTFYGVLLQGISVAGKQLSVPTSVFA-GSVMDSGTIITRLP 1126 G SGF TT+MLRSRQ PTFYG LQ I+V GKQL + SVFA GSV+DSGTIITRLP Sbjct: 297 GGGGVSGFVTTRMLRSRQIPTFYGARLQDIAVGGKQLGLSPSVFAAGSVVDSGTIITRLP 356 Query: 1127 PTAYSALSSAFKDGMKQYPPAQPRGILDTCFDFTGQDNVTIPSVALVFYGGAVVDLDANG 1306 PTAYSALSSAFK GMKQY A R ILDTCFDF GQ ++IP+VALVF GGA +DLD NG Sbjct: 357 PTAYSALSSAFKAGMKQYRSAPARSILDTCFDFAGQTQISIPTVALVFSGGAAIDLDPNG 416 Query: 1307 IILGSCLAFAATDHDGTTGIIGNVQQRTFEVLYDVGQSVVGFRPGAC 1447 I+ G+CLAFAAT DGTTGIIGNVQQRTFEVLYDVG S +GFR GAC Sbjct: 417 IMYGNCLAFAATGDDGTTGIIGNVQQRTFEVLYDVGSSTLGFRSGAC 463 >gb|EAY74910.1| hypothetical protein OsI_002757 [Oryza sativa (indica cultivar-group)] Length = 521 Score = 538 bits (1387), Expect = e-151 Identities = 280/433 (64%), Positives = 335/433 (77%), Gaps = 17/433 (3%) Frame = +2 Query: 200 CSEPKVAPSSSGRATVPLNHRHGPCSPVP---SEKKPAFAELLRRDQLRAGYVQRKFSKN 370 C + SS G ++V L+HR+GPCSP EK+P ELLRRDQLRA Y++RKFS + Sbjct: 89 CGAATIPSSSDGTSSVTLSHRYGPCSPADPNSGEKRPTDEELLRRDQLRADYIRRKFSGS 148 Query: 371 R---ADGELQQSEVTVPTTLGSSLKTLEYVITVGIGSQAVAQTMTIDTGSDVSWVQCNPC 541 A + Q S+V+VPTTLGSSL TLEYVI+VG+GS A+ Q + IDTGSDVSWVQC PC Sbjct: 149 NGTAAGEDGQSSKVSVPTTLGSSLDTLEYVISVGLGSPAMTQRVVIDTGSDVSWVQCEPC 208 Query: 542 PIP-PCHSQAGSLFDPSTSSTYAPFSCGSAACAQLGEAG--NGC-SDSQCQYIVRYVNGP 709 P P PCH+ AG+LFDP+ SSTYA F+C +AACAQLG++G NGC + S+CQYIV+Y +G Sbjct: 209 PAPSPCHAHAGALFDPAASSTYAAFNCSAAACAQLGDSGEANGCDAKSRCQYIVKYGDGS 268 Query: 710 NTNGTYGSDTLSLTESDVVKNFQFGCSHTGSGSN-DDQTDGLMGLGGDAQSLVSQTAAKY 886 NT GTY SD L+L+ SDVV+ FQFGCSH G+ DD+TDGL+GLGGDAQSLVSQTAA+Y Sbjct: 269 NTTGTYSSDVLTLSGSDVVRGFQFGCSHAELGAGMDDKTDGLIGLGGDAQSLVSQTAARY 328 Query: 887 GSTFSYCLPPTPGSSGFLTLGAPS-----GASGFATTKMLRSRQAPTFYGVLLQGISVAG 1051 G +FSYCLP TP SSGFLTLGAP+ GAS FATT MLRS++ PT+Y L+ I+V G Sbjct: 329 GKSFSYCLPATPASSGFLTLGAPASGGGGGASRFATTPMLRSKKVPTYYFAALEDIAVGG 388 Query: 1052 KQLSVPTSVFA-GSVMDSGTIITRLPPTAYSALSSAFKDGMKQYPPAQPRGILDTCFDFT 1228 K+L + SVFA GS++DSGT+ITRLPP AY+ALSSAF+ GM +Y A+P GILDTCF+FT Sbjct: 389 KKLGLSPSVFAAGSLVDSGTVITRLPPAAYAALSSAFRAGMTRYARAEPLGILDTCFNFT 448 Query: 1229 GQDNVTIPSVALVFYGGAVVDLDANGIILGSCLAFAATDHDGTTGIIGNVQQRTFEVLYD 1408 G D V+IP+VALVF GGAVVDLDA+GI+ G CLAFA T D G IGNVQQRTFEVLYD Sbjct: 449 GLDKVSIPTVALVFAGGAVVDLDAHGIVSGGCLAFAPTRDDKAFGTIGNVQQRTFEVLYD 508 Query: 1409 VGQSVVGFRPGAC 1447 VG V GFR GAC Sbjct: 509 VGGGVFGFRAGAC 521 >ref|NP_001043536.1| Os01g0608300 [Oryza sativa (japonica cultivar-group)] dbj|BAF05450.1| Os01g0608300 [Oryza sativa (japonica cultivar-group)] Length = 492 Score = 537 bits (1383), Expect = e-150 Identities = 280/435 (64%), Positives = 334/435 (76%), Gaps = 17/435 (3%) Frame = +2 Query: 194 PVCSEPKVAPSSSGRATVPLNHRHGPCSPVP---SEKKPAFAELLRRDQLRAGYVQRKFS 364 P C + SS G ++V L+HR+GPCSP EK+P ELLRRDQLRA Y++RKFS Sbjct: 58 PACGAATIPSSSDGTSSVTLSHRYGPCSPADPNSGEKRPTDEELLRRDQLRADYIRRKFS 117 Query: 365 KNR---ADGELQQSEVTVPTTLGSSLKTLEYVITVGIGSQAVAQTMTIDTGSDVSWVQCN 535 + A + Q S+V+VPTTLGSSL TLEYVI+VG+GS AV Q + IDTGSDVSWVQC Sbjct: 118 GSNGTAAGEDGQSSKVSVPTTLGSSLDTLEYVISVGLGSPAVTQRVVIDTGSDVSWVQCE 177 Query: 536 PCPIP-PCHSQAGSLFDPSTSSTYAPFSCGSAACAQLGEAG--NGC-SDSQCQYIVRYVN 703 PCP P PCH+ AG+LFDP+ SSTYA F+C +AACAQLG++G NGC + S+CQYIV+Y + Sbjct: 178 PCPAPSPCHAHAGALFDPAASSTYAAFNCSAAACAQLGDSGEANGCDAKSRCQYIVKYGD 237 Query: 704 GPNTNGTYGSDTLSLTESDVVKNFQFGCSHTGSGSN-DDQTDGLMGLGGDAQSLVSQTAA 880 G NT GTY SD L+L+ SDVV+ FQFGCSH G+ DD+TDGL+GLGGDAQS VSQTAA Sbjct: 238 GSNTTGTYSSDVLTLSGSDVVRGFQFGCSHAELGAGMDDKTDGLIGLGGDAQSPVSQTAA 297 Query: 881 KYGSTFSYCLPPTPGSSGFLTLGAPS-----GASGFATTKMLRSRQAPTFYGVLLQGISV 1045 +YG +F YCLP TP SSGFLTLGAP+ GAS FATT MLRS++ PT+Y L+ I+V Sbjct: 298 RYGKSFFYCLPATPASSGFLTLGAPASGGGGGASRFATTPMLRSKKVPTYYFAALEDIAV 357 Query: 1046 AGKQLSVPTSVFA-GSVMDSGTIITRLPPTAYSALSSAFKDGMKQYPPAQPRGILDTCFD 1222 GK+L + SVFA GS++DSGT+ITRLPP AY+ALSSAF+ GM +Y A+P GILDTCF+ Sbjct: 358 GGKKLGLSPSVFAAGSLVDSGTVITRLPPAAYAALSSAFRAGMTRYARAEPLGILDTCFN 417 Query: 1223 FTGQDNVTIPSVALVFYGGAVVDLDANGIILGSCLAFAATDHDGTTGIIGNVQQRTFEVL 1402 FTG D V+IP+VALVF GGAVVDLDA+GI+ G CLAFA T D G IGNVQQRTFEVL Sbjct: 418 FTGLDKVSIPTVALVFAGGAVVDLDAHGIVSGGCLAFAPTRDDKAFGTIGNVQQRTFEVL 477 Query: 1403 YDVGQSVVGFRPGAC 1447 YDVG V GFR GAC Sbjct: 478 YDVGGGVFGFRVGAC 492 >dbj|BAD52835.1| nucleoid DNA-binding protein cnd41-like [Oryza sativa (japonica cultivar-group)] Length = 452 Score = 537 bits (1383), Expect = e-150 Identities = 280/435 (64%), Positives = 334/435 (76%), Gaps = 17/435 (3%) Frame = +2 Query: 194 PVCSEPKVAPSSSGRATVPLNHRHGPCSPVP---SEKKPAFAELLRRDQLRAGYVQRKFS 364 P C + SS G ++V L+HR+GPCSP EK+P ELLRRDQLRA Y++RKFS Sbjct: 18 PACGAATIPSSSDGTSSVTLSHRYGPCSPADPNSGEKRPTDEELLRRDQLRADYIRRKFS 77 Query: 365 KNR---ADGELQQSEVTVPTTLGSSLKTLEYVITVGIGSQAVAQTMTIDTGSDVSWVQCN 535 + A + Q S+V+VPTTLGSSL TLEYVI+VG+GS AV Q + IDTGSDVSWVQC Sbjct: 78 GSNGTAAGEDGQSSKVSVPTTLGSSLDTLEYVISVGLGSPAVTQRVVIDTGSDVSWVQCE 137 Query: 536 PCPIP-PCHSQAGSLFDPSTSSTYAPFSCGSAACAQLGEAG--NGC-SDSQCQYIVRYVN 703 PCP P PCH+ AG+LFDP+ SSTYA F+C +AACAQLG++G NGC + S+CQYIV+Y + Sbjct: 138 PCPAPSPCHAHAGALFDPAASSTYAAFNCSAAACAQLGDSGEANGCDAKSRCQYIVKYGD 197 Query: 704 GPNTNGTYGSDTLSLTESDVVKNFQFGCSHTGSGSN-DDQTDGLMGLGGDAQSLVSQTAA 880 G NT GTY SD L+L+ SDVV+ FQFGCSH G+ DD+TDGL+GLGGDAQS VSQTAA Sbjct: 198 GSNTTGTYSSDVLTLSGSDVVRGFQFGCSHAELGAGMDDKTDGLIGLGGDAQSPVSQTAA 257 Query: 881 KYGSTFSYCLPPTPGSSGFLTLGAPS-----GASGFATTKMLRSRQAPTFYGVLLQGISV 1045 +YG +F YCLP TP SSGFLTLGAP+ GAS FATT MLRS++ PT+Y L+ I+V Sbjct: 258 RYGKSFFYCLPATPASSGFLTLGAPASGGGGGASRFATTPMLRSKKVPTYYFAALEDIAV 317 Query: 1046 AGKQLSVPTSVFA-GSVMDSGTIITRLPPTAYSALSSAFKDGMKQYPPAQPRGILDTCFD 1222 GK+L + SVFA GS++DSGT+ITRLPP AY+ALSSAF+ GM +Y A+P GILDTCF+ Sbjct: 318 GGKKLGLSPSVFAAGSLVDSGTVITRLPPAAYAALSSAFRAGMTRYARAEPLGILDTCFN 377 Query: 1223 FTGQDNVTIPSVALVFYGGAVVDLDANGIILGSCLAFAATDHDGTTGIIGNVQQRTFEVL 1402 FTG D V+IP+VALVF GGAVVDLDA+GI+ G CLAFA T D G IGNVQQRTFEVL Sbjct: 378 FTGLDKVSIPTVALVFAGGAVVDLDAHGIVSGGCLAFAPTRDDKAFGTIGNVQQRTFEVL 437 Query: 1403 YDVGQSVVGFRPGAC 1447 YDVG V GFR GAC Sbjct: 438 YDVGGGVFGFRVGAC 452